Department Environmental Toxicology

Physiologically based toxicokinetic modeling


Environmental risk assessment is essential but often relies on ethically controversial and expensive methods. One of the biggest current challenges in ecotoxicology is to replace animal testing with in vitro methods, for example based on cell cultures. However, evaluating whether a cell line is a suitable replacement involves testing many substances in animals and cell cultures in biologically similar conditions, i.e. the same amount of the chemical needs to be available to the cells in the culture and in animal tissues to expect the effect to be comparable. We develop physiologically based toxicokinetic (PBTK) models in fish and toxicokinetic models in cell cultures to computationally determine the chemical concentrations needed for a comparable test. Our PBTK models include physiological uptake of the chemical via breathing or food, stratification of the chemicals into vital organs and metabolization of the chemical therein. We have recently shown that, for some chemicals, exposure tests performed on the rainbow trout RTgill-W1 cell line and combined with the modeling approach can replace growth tests with juvenile fish.

Publications

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   0 => Snowflake\Publications\Domain\Model\Publicationprototypepersistent entity (uid=18923, pid=124)
      originalId => protected18923 (integer)
      authors => protected'Stadnicka-Michalak, J.; Schirmer, K.' (46 chars)
      title => protected'In vitro-in vivo extrapolation to predict bioaccumulation and toxicity of ch
         emicals in fish using physiologically based toxicokinetic models
' (140 chars) journal => protected'In: Seiler, T.-B.; Brinkmann, M. (Eds.), In situ bioavailability a
         nd toxicity of organic chemicals in aquatic systems
' (127 chars) year => protected2022 (integer) volume => protected0 (integer) issue => protected'' (0 chars) startpage => protected'229' (3 chars) otherpage => protected'258' (3 chars) categories => protected'PBTK model; fish growth; lethality; integrated testing design; predictive mo
         deling; chemical risk assessment; fish cell lines; toxicokinetics and toxico
         dynamics
' (160 chars) description => protected'Out of the >107 million chemicals already registered with the Chemical Ab
         stracts Services, less than 0.5% are being regulated, and even fewer are eva
         luated for their safety. Consequently, a new paradigm in risk assessment is
         urgently needed. It should encompass faster and less costly methods and redu
         ce the number of animals needed for testing. One proposal is to combine comp
         utational modeling with small-scale bioassay methods. This chapter describes
          the methods that link in vitro bioassays using fish cells with physiologica
         lly based toxicokinetic (PBTK) modeling in order to predict the acute toxici
         ty, bioaccumulation, and impact of chemicals on fish growth. The main focus
         is on PBTK modeling; thus all the model equations and parameters available f
         or eight fish species as well as suggestions for possible software implement
         ation will be provided. The PBTK model described here can account for respir
         atory and dietary uptake routes and for chemical biotransformation processes
         .
' (989 chars) serialnumber => protected'' (0 chars) doi => protected'10.1007/7653_2019_34' (20 chars) uid => protected18923 (integer) _localizedUid => protected18923 (integer)modified _languageUid => protectedNULL _versionedUid => protected18923 (integer)modified pid => protected124 (integer)
1 => Snowflake\Publications\Domain\Model\Publicationprototypepersistent entity (uid=16710, pid=124) originalId => protected16710 (integer) authors => protected'Stadnicka-Michalak, J.; Weiss, F. T.; Fischer, M.; Tanne
         berger, K.; Schirmer, K.
' (110 chars) title => protected'Biotransformation of benzo [<i>a</i>] pyrene by three rainbow trout (<i>Onch
         orhynchus mykiss</i>) cell lines and extrapolation to derive a fish bioconce
         ntration factor
' (167 chars) journal => protected'Environmental Science and Technology' (36 chars) year => protected2018 (integer) volume => protected52 (integer) issue => protected'5' (1 chars) startpage => protected'3091' (4 chars) otherpage => protected'3100' (4 chars) categories => protected'' (0 chars) description => protected'Permanent fish cell lines constitute a promising complement or substitute fo
         r fish in the environmental risk assessment of chemicals. We demonstrate the
          potential of a set of cell lines originating from rainbow trout (<i>Oncorhy
         nchus mykiss</i>) to aid in the prediction of chemical bioaccumulation in fi
         sh, using benzo[<i>a</i>]pyrene (BaP) as a model chemical. We selected three
          cell lines from different tissues to more fully account for whole-body biot
         ransformation in vivo: the RTL-W1 cell line, representing the liver as major
          site of biotransformation, and the RTgill-W1 (gill) and RTgutGC (intestine)
          cell lines, as important environment-organism interfaces, which likely infl
         uence chemical uptake. All three cell lines were found to effectively biotra
         nsform BaP. However, rates of in vitro clearance differed, with the RTL-W1 c
         ell line being most efficient, followed by RTgutGC. Co-exposures with α-nap
         hthoflavone as potent inhibitor of biotransformation, assessment of CYP1A ca
         talytic activity, and the progression of cellular toxicity upon prolonged Ba
         P exposure revealed that BaP is handled differently in the RTgill-W1 compare
         d to the other two cell lines. Application of the cell-line-derived in vitro
          clearance rates into a physiology-based toxicokinetic model predicted a BaP
          bioconcentration factor (BCF) of 909-1057 compared to 920 reported for rain
         bow trout in vivo.
' (1386 chars) serialnumber => protected'0013-936X' (9 chars) doi => protected'10.1021/acs.est.7b04548' (23 chars) uid => protected16710 (integer) _localizedUid => protected16710 (integer)modified _languageUid => protectedNULL _versionedUid => protected16710 (integer)modified pid => protected124 (integer)
2 => Snowflake\Publications\Domain\Model\Publicationprototypepersistent entity (uid=9224, pid=124) originalId => protected9224 (integer) authors => protected'Stadnicka-Michalak,&nbsp;J.; Schirmer,&nbsp;K.; Ashauer,&nbsp;R.' (64 chars) title => protected'Toxicology across scales: cell population growth in vitro predicts reduced f
         ish growth
' (86 chars) journal => protected'Science Advances' (16 chars) year => protected2015 (integer) volume => protected1 (integer) issue => protected'7' (1 chars) startpage => protected'1' (1 chars) otherpage => protected'8' (1 chars) categories => protected'' (0 chars) description => protected'Environmental risk assessment of chemicals is essential but often relies on
         ethically controversial and expensive methods. We show that tests using cell
          cultures, combined with modeling of toxicological effects, can replace test
         s with juvenile fish. Hundreds of thousands of fish at this developmental st
         age are annually used to assess the influence of chemicals on growth. Juveni
         les are more sensitive than adult fish, and their growth can affect their ch
         ances to survive and reproduce. Thus, to reduce the number of fish used for
         such tests, we propose a method that can quantitatively predict chemical imp
         act on fish growth based on in vitro data. Our model predicts reduced fish g
         rowth in two fish species in excellent agreement with measured in vivo data
         of two pesticides. This promising step toward alternatives to fish toxicity
         testing is simple, inexpensive, and fast and only requires in vitro data for
          model calibration.
' (931 chars) serialnumber => protected'' (0 chars) doi => protected'10.1126/sciadv.1500302' (22 chars) uid => protected9224 (integer) _localizedUid => protected9224 (integer)modified _languageUid => protectedNULL _versionedUid => protected9224 (integer)modified pid => protected124 (integer)
3 => Snowflake\Publications\Domain\Model\Publicationprototypepersistent entity (uid=9060, pid=124) originalId => protected9060 (integer) authors => protected'Stadnicka-Michalak,&nbsp;J.; Tanneberger,&nbsp;K.; Schirmer,&nbsp;K.; Ashaue
         r,&nbsp;R.
' (86 chars) title => protected'Measured and modeled toxicokinetics in cultured fish cells and application t
         o <I>in vitro - in vivo</I> toxicity extrapolation
' (126 chars) journal => protected'PLoS One' (8 chars) year => protected2014 (integer) volume => protected9 (integer) issue => protected'3' (1 chars) startpage => protected'e92303 (10 pp.)' (15 chars) otherpage => protected'' (0 chars) categories => protected'' (0 chars) description => protected'Effect concentrations in the toxicity assessment of chemicals with fish and
         fish cells are generally based on external exposure concentrations. External
          concentrations as dose metrics, may, however, hamper interpretation and ext
         rapolation of toxicological effects because it is the internal concentration
          that gives rise to the biological effective dose. Thus, we need to understa
         nd the relationship between the external and internal concentrations of chem
         icals. The objectives of this study were to: (i) elucidate the time-course o
         f the concentration of chemicals with a wide range of physicochemical proper
         ties in the compartments of an <I>in vitro</I> test system, (ii) derive a pr
         edictive model for toxicokinetics in the <I>in vitro</I> test system, (iii)
         test the hypothesis that internal effect concentrations in fish (<I>in vivo<
         /I>) and fish cell lines (<I>in vitro</I>) correlate, and (iv) develop a qua
         ntitative <I>in vitro</I> to <I>in vivo</I> toxicity extrapolation method fo
         r fish acute toxicity. To achieve these goals, time-dependent amounts of org
         anic chemicals were measured in medium, cells (RTgill-W1) and the plastic of
          exposure wells. Then, the relation between uptake, elimination rate constan
         ts, and log K<SUB>OW</SUB> was investigated for cells in order to develop a
         toxicokinetic model. This model was used to predict internal effect concentr
         ations in cells, which were compared with internal effect concentrations in
         fish gills predicted by a Physiologically Based Toxicokinetic model. Our mod
         el could predict concentrations of non-volatile organic chemicals with log K
         <SUB>OW</SUB> between 0.5 and 7 in cells. The correlation of the log ratio o
         f internal effect concentrations in fish gills and the fish gill cell line w
         ith the log K<SUB>OW</SUB> was significant (r>0.85, p = 0.0008, F-test). Thi
         s ratio can be predicted from the log K<SUB>OW</SUB> of the chemical (77% of
          variance explained), comprising a promising model to predict lethal effects
          on fish based on <I>in ...
' (2015 chars) serialnumber => protected'' (0 chars) doi => protected'10.1371/journal.pone.0092303' (28 chars) uid => protected9060 (integer) _localizedUid => protected9060 (integer)modified _languageUid => protectedNULL _versionedUid => protected9060 (integer)modified pid => protected124 (integer)
4 => Snowflake\Publications\Domain\Model\Publicationprototypepersistent entity (uid=7026, pid=124) originalId => protected7026 (integer) authors => protected'Stadnicka,&nbsp;J.; Schirmer,&nbsp;K.; Ashauer,&nbsp;R.' (55 chars) title => protected'Predicting concentrations of organic chemicals in fish by using toxicokineti
         c models
' (84 chars) journal => protected'Environmental Science and Technology' (36 chars) year => protected2012 (integer) volume => protected46 (integer) issue => protected'6' (1 chars) startpage => protected'3273' (4 chars) otherpage => protected'3280' (4 chars) categories => protected'' (0 chars) description => protected'Quantification of chemical toxicity continues to be generally based on measu
         red external concentrations. Yet, internal chemical concentrations have been
          suggested to be a more suitable parameter. To better understand the relatio
         nship between the external and internal concentrations of chemicals in fish,
          and to quantify internal concentrations, we compared three toxicokinetic (T
         K) models with each other and with literature data of measured concentration
         s of 39 chemicals. Two one-compartment models, together with the physiologic
         ally based toxicokinetic (PBTK) model, in which we improved the treatment of
          lipids, were used to predict concentrations of organic chemicals in two fis
         h species: rainbow trout (<em>Oncorhynchus mykiss</em>) and fathead minnow (
         <em>Pimephales promelas</em>). All models predicted the measured internal co
         ncentrations in fish within 1 order of magnitude for at least 68% of the che
         micals. Furthermore, the PBTK model outperformed the one-compartment models
         with respect to simulating chemical concentrations in the whole body (at lea
         st 88% of internal concentrations were predicted within 1 order of magnitude
          using the PBTK model). All the models can be used to predict concentrations
          in different fish species without additional experiments. However, further
         development of TK models is required for polar, ionizable, and easily biotra
         nsformed compounds.
' (1387 chars) serialnumber => protected'0013-936X' (9 chars) doi => protected'10.1021/es2043728' (17 chars) uid => protected7026 (integer) _localizedUid => protected7026 (integer)modified _languageUid => protectedNULL _versionedUid => protected7026 (integer)modified pid => protected124 (integer)
Stadnicka-Michalak, J.; Schirmer, K. (2022) In vitro-in vivo extrapolation to predict bioaccumulation and toxicity of chemicals in fish using physiologically based toxicokinetic models, In: Seiler, T.-B.; Brinkmann, M. (Eds.), In situ bioavailability and toxicity of organic chemicals in aquatic systems, 229-258, doi:10.1007/7653_2019_34, Institutional Repository
Stadnicka-Michalak, J.; Weiss, F. T.; Fischer, M.; Tanneberger, K.; Schirmer, K. (2018) Biotransformation of benzo [a] pyrene by three rainbow trout (Onchorhynchus mykiss) cell lines and extrapolation to derive a fish bioconcentration factor, Environmental Science and Technology, 52(5), 3091-3100, doi:10.1021/acs.est.7b04548, Institutional Repository
Stadnicka-Michalak, J.; Schirmer, K.; Ashauer, R. (2015) Toxicology across scales: cell population growth in vitro predicts reduced fish growth, Science Advances, 1(7), 1-8, doi:10.1126/sciadv.1500302, Institutional Repository
Stadnicka-Michalak, J.; Tanneberger, K.; Schirmer, K.; Ashauer, R. (2014) Measured and modeled toxicokinetics in cultured fish cells and application to in vitro - in vivo toxicity extrapolation, PLoS One, 9(3), e92303 (10 pp.), doi:10.1371/journal.pone.0092303, Institutional Repository
Stadnicka, J.; Schirmer, K.; Ashauer, R. (2012) Predicting concentrations of organic chemicals in fish by using toxicokinetic models, Environmental Science and Technology, 46(6), 3273-3280, doi:10.1021/es2043728, Institutional Repository

Contact

Prof. Dr. Kristin Schirmer Group leader and deputy head of department Tel. +41 58 765 5266 Send Mail

Team members

Fabian Balk Researcher Tel. +41 58 765 6478 Send Mail