Combining environmental DNA and hydrological models
In a new study, the research group of Florian Altermatt, professor at the Department of Evolutionary Biology and Environmental Studies of the University of Zurich (UZH) and the Swiss Federal Institute of Aquatic Science and Technology (Eawag), developed a novel approach to predict biodiversity patterns in river ecosystems. «For the first time, we combined the use of environmental DNA with hydrological models, in order to make predictions on the state of biodiversity at a very fine resolution across catchments of hundreds of square kilometers», says Altermatt.
Biodiversity predictions with high accuracy
All organisms constantly shed their DNA into the environment. By collecting water samples, extracting and sequencing this so-called environmental DNA (eDNA), the biodiversity can be determined faster, less invasively and more comprehensively than by identifying the organisms themselves. Since the DNA in rivers can be transported downstream by stream flow for many kilometers, information on the occurrence of organisms in the upstream catchment is also received. Using mathematical models based on hydrological principles, the scientists were able to reconstruct biodiversity patterns for the whole 740 square kilometers basin of the Thur in North-Eastern Switzerland with a resolution of 1 kilometer long stream sections. «Our model is matching the direct observation of aquatic insects’ local occurrence with an unprecedented accuracy of 57 to 100 %», says Luca Carraro, first author of the study.