Department Fish Ecology and Evolution

Publications

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Publications 2024

Ahi, E. P., Verta, J. P., Kurko, J., Ruokolainen, A., Singh, P., Debes, P. V., … Primmer, C. R. (2024). Gene co-expression patterns in Atlantic salmon adipose tissue provide a molecular link among seasonal changes, energy balance and age at maturity. Molecular Ecology. doi:10.1111/mec.17313, Institutional Repository
Alila, D. O., ten Brink, H., Haesler, M., & Seehausen, O. (2024). Ecological character displacement among Nothobranchius annual killifishes in Tanzania. Evolution, International Journal of Organic Evolution. doi:10.1093/evolut/qpae005, Institutional Repository
Feller, A. F., Peichel, C. L., & Seehausen, O. (2024). Testing for a role of postzygotic incompatibilities in rapidly speciated Lake Victoria cichlids. Evolution, International Journal of Organic Evolution. doi:10.1093/evolut/qpae007, Institutional Repository
Haltiner, L., Spaak, P., Dennis, S. R., & Feulner, P. G. D. (2024). Population genetic insights into establishment, adaptation, and dispersal of the invasive quagga mussel across perialpine lakes. Evolutionary Applications, 17(1), e13620 (16 pp.). doi:10.1111/eva.13620, Institutional Repository
King, L., Devey, M., Leavitt, P. R., Power, M. J., Brothers, S., & Brahney, J. (2024). Anthropogenic forcing leads to an abrupt shift to phytoplankton dominance in a shallow eutrophic lake. Freshwater Biology, 69(3), 335-350. doi:10.1111/fwb.14214, Institutional Repository
King, L., Courtney-Mustaphi, C., Cuenca-Cambronero, M., Wienhues, G., Ngoepe, N., Muschick, M., … Matthews, B. (2024). Temporal dynamics of invertebrate community assembly in Lake Victoria since the late Pleistocene based on chitinous remains. Freshwater Biology. doi:10.1111/fwb.14237, Institutional Repository
Melián, C. J., & Eguíluz, V. M. (2024). Food webs as multilayer networks. In S. A. Levin (Ed.), Encyclopedia of biodiversity: Vol. 5. Encyclopedia of biodiversity (pp. 84-91). doi:10.1016/B978-0-12-822562-2.00119-5, Institutional Repository
Misra, P., Sinha, R., Farooqui, A., & Tandon, S. K. (2024). Landscape evolution of the Ganga-Sai interfluve in response to river dynamics and Late Pleistocene-Holocene climate change via a meander cut-off lake of a plains-fed channel. Geomorphology, 449, 109068 (16 pp.). doi:10.1016/j.geomorph.2024.109068, Institutional Repository
Moosmann, M., Greenway, R., Oester, R., & Matthews, B. (2024). The role of fish predators and their foraging traits in shaping zooplankton community structure. Ecology Letters, 27(2), e14382 (13 pp.). doi:10.1111/ele.14382, Institutional Repository
Spaak, P., Alexander, J., Baehni, L., Burlakova, L. E., Dennis, S. R., Feulner, P. G. D., … Stöckli, R. (2024). Voralpine Seen und Trinkwasserversorgung durch Muscheln bedroht. Wasserwirtschaft Wassertechnik wwt, 3, 73-79. , Institutional Repository
Stankowski, S., Cutter, A. D., Satokangas, I., Lerch, B. A., Rolland, J., Smadja, C. M., … Kulmuni, J. (2024). Toward the integration of speciation research. Evolutionary Journal of the Linnean Society, 3(1), 1-24. doi:10.1093/evolinnean/kzae001, Institutional Repository

Publications 2023

peer reviewed journals

Anaya-Rojas, J. M., Bassar, R. D., Matthews, B., Goldberg, J. F., King, L., Reznick, D., & Travis, J. (2023). Does the evolution of ontogenetic niche shifts favour species coexistence? An empirical test in Trinidadian streams. Journal of Animal Ecology, 92(8), 1601-1612. doi:10.1111/1365-2656.13912, Institutional Repository
Baruah, G. (2023). Transitions and its indicators in mutualistic meta-networks: effects of network topology, size of metacommunities and species dispersal. Evolutionary Ecology, 37(4), 691-708. doi:10.1007/s10682-023-10239-3, Institutional Repository
Blackman, R. C., Walser, J. ‐C., Rüber, L., Brantschen, J., Villalba, S., Brodersen, J., … Altermatt, F. (2023). General principles for assignments of communities from eDNA: open versus closed taxonomic databases. Environmental DNA, 5(2), 326-342. doi:10.1002/edn3.382, Institutional Repository
Brodersen, J., Hellmann, J., & Seehausen, O. (2023). Erhebung der Fischbiodiversität in Schweizer Fliessgewässern. "Progetto Fiumi" Schlussbericht. doi:10.55408/eawag:30020, Institutional Repository
Brodersen, J., Seehausen, O., Hellmann, J., & Vonlanthen, P. (2023). Progetto Fiumi. Standardisierte Erhebung der Fischbiodiversität in Schweizer Fliessgewässern. Aqua & Gas, 103(4), 50-60. , Institutional Repository
Brown, G. P., Hudson, C. M., & Shine, R. (2023). Do changes in body mass alter white blood cell profiles and immune function in Australian cane toads (Rhinella marina)?. Philosophical Transactions of the Royal Society B: Biological Sciences, 378(1882), 20220122 (9 pp.). doi:10.1098/rstb.2022.0122, Institutional Repository
Chen, R., Chaparro-Pedraza, P. C., Xiao, S., Jia, P., Liu, Q. X., & de Roos, A. M. (2023). Marine reserves promote cycles in fish populations on ecological and evolutionary time scales. Proceedings of the National Academy of Sciences of the United States of America PNAS, 120(47), e2307529120 (10 pp.). doi:10.1073/pnas.2307529120, Institutional Repository
Choo, L. Q., Spagliardi, G., Malinsky, M., Choquet, M., Goetze, E., Hoarau, G., & Peijnenburg, K. T. C. A. (2023). Genome-wide phylogeography reveals cryptic speciation in the circumglobal planktonic calcifier Limacina bulimoides. Molecular Ecology, 32(12), 3200-3219. doi:10.1111/mec.16931, Institutional Repository
Duenser, A., Singh, P., Lecaudey, L. A., Sturmbauer, C., Albertson, R. C., Gessl, W., & Ahi, E. P. (2023). Conserved molecular players involved in human nose morphogenesis underlie evolution of the exaggerated snout phenotype in cichlids. Genome Biology and Evolution, 15(4), evad045 (16 pp.). doi:10.1093/gbe/evad045, Institutional Repository
Ehrenfels, B., Junker, J., Namutebi, D., Callbeck, C. M., Dinkel, C., Kalangali, A., … Wehrli, B. (2023). Isotopic signatures induced by upwelling reveal regional fish stocks in Lake Tanganyika. PLoS One, 18(11), e0281828 (29 pp.). doi:10.1371/journal.pone.0281828, Institutional Repository
Fehlinger, L., Mathieu-Resuge, M., Pilecky, M., Parmar, T. P., Twining, C. W., Martin-Creuzburg, D., & Kainz, M. J. (2023). Export of dietary lipids via emergent insects from eutrophic fishponds. Hydrobiologia, 850(15), 3241-3256. doi:10.1007/s10750-022-05040-2, Institutional Repository
Frei, D., Mwaiko, S., Seehausen, O., & Feulner, P. G. D. (2023). Ecological disturbance reduces genomic diversity across an Alpine whitefish adaptive radiation. Evolutionary Applications. doi:10.1111/eva.13617, Institutional Repository
Frei, D., Reichlin, P., Seehausen, O., & Feulner, P. G. D. (2023). Introgression from extinct species facilitates adaptation to its vacated niche. Molecular Ecology, 32(4), 841-853. doi:10.1111/mec.16791, Institutional Repository
Gobbin, T. P., Vanhove, M. P. M., Veenstra, R., Maan, M. E., & Seehausen, O. (2023). Variation in parasite infection between replicates of speciation in Lake Victoria cichlid fish. Evolution, International Journal of Organic Evolution, 77(7), 1682-1690. doi:10.1093/evolut/qpad080, Institutional Repository
Haberthür, D., Law, M., Ford, K., Häsler, M., Seehausen, O., & Hlushchuk, R. (2023). Microtomographic investigation of a large corpus of cichlids. PLoS One, 18(9), e0291003 (11 pp.). doi:10.1371/journal.pone.0291003, Institutional Repository
Hudson, C. M., Cuenca Cambronero, M., Moosmann, M., Narwani, A., Spaak, P., Seehausen, O., & Matthews, B. (2023). Environmentally independent selection for hybrids between divergent freshwater stickleback lineages in semi-natural ponds. Journal of Evolutionary Biology, 36(8), 1166-1184. doi:10.1111/jeb.14194, Institutional Repository
Huston, G. P., Lopez, M. L. D., Cheng, Y., King, L., Duxbury, L. C., Picard, M., … Capo, E. (2023). Detection of fish sedimentary DNA in aquatic systems: a review of methodological challenges and future opportunities. Environmental DNA, 5(6), 1449-1472. doi:10.1002/edn3.467, Institutional Repository
Josi, D., Seehausen, O., Wegscheider, B., Waldock, C., Calegari, B., Zinn, N., … Fischer, M. (2023). Biodiversitätsverlust der Gewässer stoppen. Aqua & Gas, 103(9), 66-67. , Institutional Repository
Jungwirth, A., Zöttl, M., Bonfils, D., Josi, D., Frommen, J. G., & Taborsky, M. (2023). Philopatry yields higher fitness than dispersal in a cooperative breeder with sex-specific life history trajectories. Science Advances, 9(9), eadd2146 (12 pp.). doi:10.1126/sciadv.add2146, Institutional Repository
Kagawa, K., Takimoto, G., & Seehausen, O. (2023). Transgressive segregation in mating traits drives hybrid speciation. Evolution, International Journal of Organic Evolution, 77(7), 1622-1633. doi:10.1093/evolut/qpad072, Institutional Repository
Keggin, T., Waldock, C., Skeels, A., Hagen, O., Albouy, C., Manel, S., & Pellissier, L. (2023). Diversity across organisational scale emerges through dispersal ability and speciation dynamics in tropical fish. BMC Biology, 21(1), 282. doi:10.1186/s12915-023-01771-3, Institutional Repository
King, L., Brahney, J., Daly, S., Paul, M. J., Salk, K. R., & Brothers, S. (2023). Primary production modeling identifies restoration targets for shifting shallow, eutrophic lakes to clear-water regimes. Freshwater Science, 42(1), 44-57. doi:10.1086/723892, Institutional Repository
Kizgin, A., Schmidt, D., Joss, A., Hollender, J., Morgenroth, E., Kienle, C., & Langer, M. (2023). Application of biological early warning systems in wastewater treatment plants: Introducing a promising approach to monitor changing wastewater composition. Journal of Environmental Management, 347, 119001 (12 pp.). doi:10.1016/j.jenvman.2023.119001, Institutional Repository
Lavender, E., Hunziker, Y., McLennan, D., Dermond, P., Stalder, D., Selz, O., & Brodersen, J. (2023). Sex‐ and length‐dependent variation in migratory propensity in brown trout. Ecology of Freshwater Fish, 23(1), e12745 (12 pp.). doi:10.1111/eff.12745, Institutional Repository
Le Pennec, G., Retel, C., Kowallik, V., Becks, L., & Feulner, P. G. D. (2023). Demographic fluctuations and selection during host–parasite co-evolution interactively increase genetic diversity. Molecular Ecology. doi:10.1111/mec.16939, Institutional Repository
McFadden, I. R., Sendek, A., Brosse, M., Bach, P. M., Baity‐Jesi, M., Bolliger, J., … Narwani, A. (2023). Linking human impacts to community processes in terrestrial and freshwater ecosystems. Ecology Letters, 26(2), 203-218. doi:10.1111/ele.14153, Institutional Repository
Meier, J. I., McGee, M. D., Marques, D. A., Mwaiko, S., Kishe, M., Wandera, S., … Seehausen, O. (2023). Cycles of fusion and fission enabled rapid parallel adaptive radiations in African cichlids. Science, 381(6665), eade2833 (13 pp.). doi:10.1126/science.ade2833, Institutional Repository
Moosmann, M., Hudson, C. M., Seehausen, O., & Matthews, B. (2023). The phenotypic determinants of diet variation between divergent lineages of threespine stickleback. Evolution, International Journal of Organic Evolution, 77(1), 13-25. doi:10.1093/evolut/qpac021, Institutional Repository
Muschick, M., Jemmi, E., Lengacher, N., Hänsch, S., Wales, N., Kishe, M. A., … Seehausen, O. (2023). Ancient DNA is preserved in fish fossils from tropical lake sediments. Molecular Ecology, 32(22), 5913-5931. doi:10.1111/mec.17159, Institutional Repository
Müller, C., Moser, F. N., Frei, D., & Seehausen, O. (2023). Constraints to speciation despite divergence in an old haplochromine cichlid lineage. Evolution, International Journal of Organic Evolution, 77(3), 823-835. doi:10.1093/evolut/qpad001, Institutional Repository
Ngoepe, N., Muschick, M., Kishe, M. A., Mwaiko, S., Temoltzin-Loranca, Y., King, L., … Seehausen, O. (2023). A continuous fish fossil record reveals key insights into adaptive radiation. Nature, 622, 315-320. doi:10.1038/s41586-023-06603-6, Institutional Repository
Nilsson, P. A., Ranåker, L., Hulthén, K., Nilsson-Örtman, V., Brönmark, C., & Brodersen, J. (2023). First-season growth and food of YOY pike (Esox lucius) are habitat specific within a lake. Fisheries Research, 259, 106563 (6 pp.). doi:10.1016/j.fishres.2022.106563, Institutional Repository
Palamara, G. M., Rozenfeld, A., de Santana, C. N., Klecka, J., Riera, R., Eguíluz, V. M., & Melián, C. J. (2023). Biodiversity dynamics in landscapes with fluctuating connectivity. Ecography, 2023(7), e06385 (12 pp.). doi:10.1111/ecog.06385, Institutional Repository
Rey, P., Bosch, N., Alexander, J., DeWeber, J. T., Feulner, P. G. D., Frei, D., … Spaak, P. (2023). Felchen im Bodensee - gestern, heute, morgen. Aqua & Gas, 103(7-8), 82-88. , Institutional Repository
Ries, S. R., Faust, E., Johannesson, K., Jonsson, P. R., Moksnes, P. O., Pereyra, R. T., & Jahnke, M. (2023). Genetic structure and diversity of the seagrass Zostera marina along a steep environmental gradient, with implications for genetic monitoring. Frontiers in Climate, 5, 1303337 (15 pp.). doi:10.3389/fclim.2023.1303337, Institutional Repository
Rüber, L., Gandolfi, A., Foresti, D., Paltrinieri, L., Splendiani, A., & Seehausen, O. (2023). Phylogenetic and biogeographic history of brook lampreys (Lampetra: Petromyzontidae) in the river basins of the Adriatic Sea based on DNA barcode data. Ecology and Evolution, 13(9), e10496 (11 pp.). doi:10.1002/ece3.10496, Institutional Repository
Saboret, G., Stalder, D., Matthews, B., Brodersen, J., & Schubert, C. J. (2023). Autochthonous production sustains food webs in large perialpine lakes, independent of trophic status: evidence from amino acid stable isotopes. Freshwater Biology, 68(5), 870-887. doi:10.1111/fwb.14071, Institutional Repository
Schwery, O., Sipley, B. N., Braga, M. P., Yang, Y., Rebollo, R., & Zu, P. (2023). Plant scent and plant–insect interactions - review and outlook from a macroevolutionary perspective. Journal of Systematics and Evolution, 61(3), 465-486. doi:10.1111/jse.12933, Institutional Repository
Selz, O. M., & Seehausen, O. (2023). A taxonomic revision of ten whitefish species from the lakes Lucerne, Sarnen, Sempach and Zug, Switzerland, with descriptions of seven new species (Teleostei, Coregonidae). ZooKeys, 1144, 95-169. doi:10.3897/zookeys.1144.67747, Institutional Repository
Singh, P., Taborsky, M., Peichel, C. L., & Sturmbauer, C. (2023). Genomic basis of Y-linked dwarfism in cichlids pursuing alternative reproductive tactics. Molecular Ecology, 32(7), 1592-1607. doi:10.1111/mec.16839, Institutional Repository
Spaak, P., Alexander, J., Baehni, L., Burlakova, L. E., Dennis, S. R., Feulner, P. G. D., … Stöckli, R. (2023). Quaggamuscheln bedrohen Voralpine Seen. Grundlegende Veränderungen der Seen möglich. Aqua & Gas, 103(6), 60-65. , Institutional Repository
Stieb, S. M., Cortesi, F., Jardim de Queiroz, L., Carleton, K. L., Seehausen, O., & Marshall, N. J. (2023). Long-wavelength-sensitive (lws) opsin gene expression, foraging and visual communication in coral reef fishes. Molecular Ecology, 32(7), 1656-1672. doi:10.1111/mec.16831, Institutional Repository
Takatsu, K., Delarue, C., Heller, N., Saboret, G., & Brodersen, J. (2023). Relationships between egg size and maternal size, life history forms, and habitats of Greenlandic Arctic charr (Salvelinus alpinus). Environmental Biology of Fishes, 106(6), 923-932. doi:10.1007/s10641-022-01374-x, Institutional Repository
Takatsu, K., & Brodersen, J. (2023). Repeated elevational clines of early life-history traits and their proximate mechanisms in brown trout. Freshwater Biology, 68(4), 609-620. doi:10.1111/fwb.14050, Institutional Repository
Temoltzin-Loranca, Y., Gobet, E., Vannière, B., van Leeuwen, J. F. N., Wienhues, G., Szidat, S., … Tinner, W. (2023). A chronologically reliable record of 17,000 years of biomass burning in the Lake Victoria area. Quaternary Science Reviews, 301, 107915 (16 pp.). doi:10.1016/j.quascirev.2022.107915, Institutional Repository
Temoltzin-Loranca, Y., Gobet, E., Vannière, B., van Leeuwen, J. F. N., Wienhues, G., Courtney-Mustaphi, C., … Tinner, W. (2023). Long-term ecological successions of vegetation around Lake Victoria (East Africa) in response to latest Pleistocene and Early Holocene climatic changes. Palaeogeography, Palaeoclimatology, Palaeoecology, 631, 111839 (14 pp.). doi:10.1016/j.palaeo.2023.111839, Institutional Repository
Thorburn, D. ‐M. J., Sagonas, K., Binzer‐Panchal, M., Chain, F. J. J., Feulner, P. G. D., Bornberg‐Bauer, E., … Eizaguirre, C. (2023). Origin matters: using a local reference genome improves measures in population genomics. Molecular Ecology Resources, 23(7), 1706-1723. doi:10.1111/1755-0998.13838, Institutional Repository
Twining, C. W., Shipley, J. R., McCue, M. D., Pokrovsky, I., Gregoire, A., Faivre, B., … Partecke, J. (2023). Energetics and fuel use vary with migration strategy across populations of Common Blackbirds. Functional Ecology, 37(7), 1910-1921. doi:10.1111/1365-2435.14359, Institutional Repository
Wegscheider, B., Monk, W. A., Lento, J., Haralampides, K., Ndong, M., Linnansaari, T., & Allen Curry, R. (2023). Developing environmental flow targets for benthic macroinvertebrates in large rivers using hydraulic habitat associations and taxa thresholds. Ecological Indicators, 146, 109821 (12 pp.). doi:10.1016/j.ecolind.2022.109821, Institutional Repository
Wienhues, G., Temoltzin-Loranca, Y., Vogel, H., Morlock, M. A., Cohen, A. S., Anselmetti, F. S., … Grosjean, M. (2023). From desiccation to wetlands and outflow: rapid re-filling of Lake Victoria during the Latest Pleistocene 14–13 ka. Journal of Great Lakes Research, 102246 (10 pp.). doi:10.1016/j.jglr.2023.102246, Institutional Repository
Zu, P. ‐J., García‐García, R., Schuman, M. C., Saavedra, S., & Melián, C. J. (2023). Plant–insect chemical communication in ecological communities: an information theory perspective. Journal of Systematics and Evolution, 61(3), 445-453. doi:10.1111/jse.12841, Institutional Repository
Závorka, L., Blanco, A., Chaguaceda, F., Cucherousset, J., Killen, S. S., Liénart, C., … Kainz, M. J. (2023). The role of vital dietary biomolecules in eco-evo-devo dynamics. Trends in Ecology and Evolution, 38(1), 72-84. doi:10.1016/j.tree.2022.08.010, Institutional Repository
ten Brink, H., Haaland, T. R., Massol, F., & Opedal, Ø. H. (2023). Seasonality and competition select for variable germination behavior in perennials. Evolution, International Journal of Organic Evolution, 77(8), 1791-1805. doi:10.1093/evolut/qpad089, Institutional Repository

Publications 2022

peer reviewed journals

Albertson, L. K., Briggs, M. A., Maguire, Z., Swart, S., Cross, W. F., Twining, C. W., … Walters, D. M. (2022). Dietary composition and fatty acid content of giant salmonflies (Pteronarcys californica) in two Rocky Mountain rivers. Ecosphere, 13(1), e3904 (10 pp.). doi:10.1002/ecs2.3904, Institutional Repository
Auber, A., Waldock, C., Maire, A., Goberville, E., Albouy, C., Algar, A. C., … Mouillot, D. (2022). A functional vulnerability framework for biodiversity conservation. Nature Communications, 13, 4774 (13 pp.). doi:10.1038/s41467-022-32331-y, Institutional Repository
Baruah, G., Ozgul, A., & Clements, C. F. (2022). Community structure determines the predictability of population collapse. Journal of Animal Ecology, 91(9), 1880-1891. doi:10.1111/1365-2656.13769, Institutional Repository
Baruah, G. (2022). The impact of individual variation on abrupt collapses in mutualistic networks. Ecology Letters, 25(1), 26-37. doi:10.1111/ele.13895, Institutional Repository
Beck, C., Albayrak, I., Meister, J., Peter, A., Selz, O. M., Leuch, C., … Boes, R. M. (2022). Fish swimming behavior and bypass acceptance at curved-bar rack bypass systems. In Proceedings of the IAHR World Congress. Proceedings of the 39th IAHR world congress (Granada, 2022) (pp. 1246-1255). doi:10.3929/ethz-b-000560944, Institutional Repository
Brown, C. J. M., Curry, R. A., Gray, M. A., Lento, J., MacLatchy, D. L., Monk, W. A., … Munkittrick, K. R. (2022). Considering fish as recipients of ecosystem services provides a framework to formally link baseline, development, and post-operational monitoring programs and improve aquatic impact assessments for large scale developments. Environmental Management, 70(2), 350-367. doi:10.1007/s00267-022-01665-0, Institutional Repository
Chaparro‐Pedraza, P. C., Roth, G., & Seehausen, O. (2022). The enrichment paradox in adaptive radiations: emergence of predators hinders diversification in resource rich environments. Ecology Letters, 25(4), 802-813. doi:10.1111/ele.13955, Institutional Repository
Chaturvedi, S., Gompert, Z., Feder, J. L., Osborne, O. G., Muschick, M., Riesch, R., … Nosil, P. (2022). Climatic similarity and genomic background shape the extent of parallel adaptation in Timema stick insects. Nature Ecology & Evolution, 6, 1952-1964. doi:10.1038/s41559-022-01909-6, Institutional Repository
Costa Leal, M., Rey, F., Duarte Ferreira, G., Domingues, M. R., & Calado, R. (2022). Inter-individual variability of early life stages of a model marine invertebrate with a bi-phasic life cycle is shaped by contrasting oceanographic conditions. Frontiers in Marine Science, 9, 984569 (12 pp.). doi:10.3389/fmars.2022.984569, Institutional Repository
Cuenca-Cambronero, M., Courtney-Mustaphi, C. J., Greenway, R., Heiri, O., Hudson, C. M., King, L., … Matthews, B. (2022). An integrative paleolimnological approach for studying evolutionary processes. Trends in Ecology and Evolution, 37(6), 488-496. doi:10.1016/j.tree.2022.01.007, Institutional Repository
De-Kayne, R., Selz, O. M., Marques, D. A., Frei, D., Seehausen, O., & Feulner, P. G. D. (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), 4479 (13 pp.). doi:10.1038/s41467-022-32181-8, Institutional Repository
Ebenezer, T. G. E., Muigai, A. W. T., Nouala, S., Badaoui, B., Blaxter, M., Buddie, A. G., … Djikeng, A. (2022). Africa: sequence 100,000 species to safeguard biodiversity. Nature, 603(7901), 388-392. doi:10.1038/d41586-022-00712-4, Institutional Repository
Fark, S. N., Gerber, S., Alonzo, S. H., Kindsvater, H. K., Meier, J. I., & Seehausen, O. (2022). Multispecies colour polymorphisms associated with contrasting microhabitats in two Mediterranean wrasse radiations. Journal of Evolutionary Biology, 35(4), 633-647. doi:10.1111/jeb.13999, Institutional Repository
Feller, A. F., & Seehausen, O. (2022). Genetic architecture of adaptive radiation across two trophic levels. Proceedings of the Royal Society B: Biological Sciences, 289(1974), 20220377 (9 pp.). doi:10.1098/rspb.2022.0377, Institutional Repository
Ford, K. L., Peterson, R., Bernt, M., & Albert, J. S. (2022). Convergence is only skin deep: craniofacial evolution in electric fishes from South America and Africa (Apteronotidae and Mormyridae). Integrative Organismal Biology, 4(1), obac022 (16 pp.). doi:10.1093/iob/obac022, Institutional Repository
Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., … European Reference Genome Atlas (ERGA) Consortium (2022). The era of reference genomes in conservation genomics. Trends in Ecology and Evolution, 37(3), 197-202. doi:10.1016/j.tree.2021.11.008, Institutional Repository
Frei, D., De-Kayne, R., Selz, O. M., Seehausen, O., & Feulner, P. G. D. (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature Ecology & Evolution, 6, 461-468. doi:10.1038/s41559-022-01665-7, Institutional Repository
Guntern, J., Altermatt, F., Seehausen, O., Stamm, C., & van der Heijden, M. (2022). Auswirkungen übermässiger Stickstoff- und Phosphoreinträge auf die Biodiversität. Umweltrecht in der Praxis, 36(7), 735-752. , Institutional Repository
Havird, J. C., Brannock, P. M., Yoshioka, R. M., Vaught, R. C., Carlson, K. 'a, Edwards, C., … Santos, S. R. (2022). Grazing by an endemic atyid shrimp controls microbial communities in the Hawaiian anchialine ecosystem. Limnology and Oceanography, 67(9), 2012-2027. doi:10.1002/lno.12184, Institutional Repository
Ho, H. C., Brodersen, J., Gossner, M. M., Graham, C. H., Kaeser, S., Reji Chacko, M., … Altermatt, F. (2022). Blue and green food webs respond differently to elevation and land use. Nature Communications, 13(1), 6415 (12 pp.). doi:10.1038/s41467-022-34132-9, Institutional Repository
Hudson, C. M., Ladd, S. N., Leal, M. C., Schubert, C. J., Seehausen, O., & Matthews, B. (2022). Fit and fatty freshwater fish: contrasting polyunsaturated fatty acid phenotypes between hybridizing stickleback lineages. Oikos, 2022(7), e08558 (14 pp.). doi:10.1111/oik.08558, Institutional Repository
Hulthén, K., Chapman, B. B., Nilsson, P. A., Hansson, L. A., Skov, C., Brodersen, J., & Brönmark, C. (2022). Timing and synchrony of migration in a freshwater fish: consequences for survival. Journal of Animal Ecology, 91(10), 2103-2112. doi:10.1111/1365-2656.13790, Institutional Repository
Jardim de Queiroz, L., Doenz, C. J., Altermatt, F., Alther, R., Borko, Š., Brodersen, J., … Seehausen, O. (2022). Climate, immigration and speciation shape terrestrial and aquatic biodiversity in the European Alps. Proceedings of the Royal Society B: Biological Sciences, 289(1980), 20221020 (10 pp.). doi:10.1098/rspb.2022.1020, Institutional Repository
Jasper, R. J., McDonald, T. K., Singh, P., Lu, M., Rougeux, C., Lind, B. M., & Yeaman, S. (2022). Evaluating the accuracy of variant calling methods using the frequency of parent-offspring genotype mismatch. Molecular Ecology Resources, 22(7), 2524-2533. doi:10.1111/1755-0998.13628, Institutional Repository
Lürig, M. D. (2022). phenopype: a phenotyping pipeline for Python. Methods in Ecology and Evolution, 13(3), 569-576. doi:10.1111/2041-210X.13771, Institutional Repository
Maasri, A., Jähnig, S. C., Adamescu, M. C., Adrian, R., Baigun, C., Baird, D. J., … Worischka, S. (2022). A global agenda for advancing freshwater biodiversity research. Ecology Letters, 25(2), 255-263. doi:10.1111/ele.13931, Institutional Repository
Mancinelli, A. C., Mattioli, S., Twining, C., Bosco, A. D., Donoghue, A. M., Arsi, K., … Castellini, C. (2022). Poultry meat and eggs as an alternative source of n-3 long-chain polyunsaturated fatty acids for human nutrition. Nutrients, 14(9), 1969 (29 pp.). doi:10.3390/nu14091969, Institutional Repository
Marques, D. A., Jones, F. C., Di Palma, F., Kingsley, D. M., & Reimchen, T. E. (2022). Genomic changes underlying repeated niche shifts in an adaptive radiation. Evolution, International Journal of Organic Evolution, 76(6), 1302-1319. doi:10.1111/evo.14490, Institutional Repository
Meister, J., Selz, O. M., Beck, C., Peter, A., Albayrak, I., & Boes, R. M. (2022). Protection and guidance of downstream moving fish with horizontal bar rack bypass systems. Ecological Engineering, 178, 106584 (15 pp.). doi:10.1016/j.ecoleng.2022.106584, Institutional Repository
Moldenhauer-Roth, A., Selz, O. M., Albayrak, I., Unterberger, F., & Boes, R. M. (2022). Development of low-voltage electrified fish guidance racks for safe downstream fish migration. In M. Ortega-Sánchez (Ed.), IAHR world congress: Vol. 2022. Proceedings of the 39th IAHR world congress (pp. 1256-1265). doi:10.3850/IAHR-39WC25217119202292, Institutional Repository
Moor, H., Gossner, M. M., Graham, C., Hobi, M. L., Logar, I., Narwani, A., … Altermatt, F. (2022). Besserer Biodiversitätsschutz in Blau-Grünen Ökosystemen. Des écosystèmes bleus-verts pour mieux protéger la biodiversité. Nature et Paysage. Natur und Landschaft: Inside (1), 25-29. , Institutional Repository
Moor, H., Gossner, M. M., Graham, C., Hobi, M. L., Logar, I., Matthews, B., … Altermatt, F. (2022). Blau-grüne Biodiversität ist ein wichtiger Teil des Waldes. Wald und Holz, 103(4), 30-33. , Institutional Repository
Muschick, M., Nikolaeva, E., Rüber, L., & Matschiner, M. (2022). The mitochondrial genome of the red icefish (Channichthys rugosus) casts doubt on its species status. Polar Biology, 45, 1541-1552. doi:10.1007/s00300-022-03083-8, Institutional Repository
Müller, B., Wüest, A., Schmid, M., Janssen, D., & Sperlich, N. (2022). Auswirkungen der Zirkulationsunterstützung (Beurteilung see-interner Massnahmen zur beschleunigten Sanierung des Zugersees). Kastanienbaum: Eawag. , Institutional Repository
Oester, R., Greenway, R., Moosmann, M., Sommaruga, R., Tartarotti, B., Brodersen, J., & Matthews, B. (2022). The influence of predator community composition on photoprotective traits of copepods. Ecology and Evolution, 12(4), e8862 (10 pp.). doi:10.1002/ece3.8862, Institutional Repository
Parmar, T. P., Kindinger, A. L., Mathieu-Resuge, M., Twining, C. W., Shipley, J. R., Kainz, M. J., & Martin-Creuzburg, D. (2022). Fatty acid composition differs between emergent aquatic and terrestrial insects - a detailed single system approach. Frontiers in Ecology and Evolution, 10, 952292 (13 pp.). doi:10.3389/fevo.2022.952292, Institutional Repository
Pietsch, U., Moeckel, J., Koppenberg, J., Josi, D., Jungwirth, A., Hautz, W. E., … Albrecht, R. (2022). Stability of drugs stored in helicopters for use by emergency medical services: a prospective observational study. Annals of emergency medicine, 80(4), 364-370. doi:10.1016/j.annemergmed.2022.05.038, Institutional Repository
Rauch, S., Koppenberg, J., Josi, D., Meuli, L., Strapazzon, G., Pasquier, M., … Pietsch, U. (2022). Avalanche survival depends on the time of day of the accident: a retrospective observational study. Resuscitation, 174, 47-52. doi:10.1016/j.resuscitation.2022.03.023, Institutional Repository
Reichard, M., Janáč, M., Blažek, R., Žák, J., Alila, O. D., & Polačik, M. (2022). Patterns and drivers of Nothobranchius killifish diversity in lowland Tanzania. Ecology and Evolution, 12(6), e8990 (12 pp.). doi:10.1002/ece3.8990, Institutional Repository
Retel, C., Kowallik, V., Becks, L., & Feulner, P. G. D. (2022). Strong selection and high mutation supply characterize experimental Chlorovirus evolution. Virus Evolution, 8(1), veac003 (14 pp.). doi:10.1093/ve/veac003, Institutional Repository
Rick, J. A., Junker, J., Kimirei, I. A., Sweke, E. A., Mosille, J. B., Dinkel, C., … Wagner, C. E. (2022). The genetic population structure of Lake Tanganyika's Lates species flock, an endemic radiation of pelagic top predators. Journal of Heredity, 113(2), 145-159. doi:10.1093/jhered/esab072, Institutional Repository
Saavedra, S., Bartomeus, I., Godoy, O., Rohr, R. P., & Zu, P. (2022). Towards a system-level causative knowledge of pollinator communities. Philosophical Transactions of the Royal Society B: Biological Sciences, 377(1853), 20210159 (7 pp.). doi:10.1098/rstb.2021.0159, Institutional Repository
Schuwirth, N., Brodersen, J., Caradima, B., & Scheidegger, A. (2022). Umwelteinflüsse auf häufige Fischgattungen. Auswertung von Fisch-Monitoring-Programmen. Aqua & Gas, 102(6), 66-71. , Institutional Repository
Seehausen, O., Alexander, T., Vonlanthen, P., & Egloff, N. (2022). Einfluss von Umwelt-Faktoren auf Fischartengemeinschaften. Projet Lac. Aqua & Gas, 102(7-8), 72-79. , Institutional Repository
Seehausen, O., Alexander, T., Egloff, N., & Vonlanthen, P. (2022). Unerwartete Artenvielfalt in Seen des Alpenraums. Project Lac. Aqua & Gas, 102(7-8), 64-71. , Institutional Repository
Shipley, J. R., Twining, C. W., Mathieu-Resuge, M., Parmar, T. P., Kainz, M., Martin-Creuzburg, D., … Matthews, B. (2022). Climate change shifts the timing of nutritional flux from aquatic insects. Current Biology, 32(6), 1342-1349. doi:10.1016/j.cub.2022.01.057, Institutional Repository
Shipley, J. R., Twining, C. W., Taff, C. C., Vitousek, M. N., & Winkler, D. W. (2022). Selection counteracts developmental plasticity in body-size responses to climate change. Nature Climate Change, 12, 863-868. doi:10.1038/s41558-022-01457-8, Institutional Repository
Singh, P., & Pashay Ahi, E. (2022). The importance of alternative splicing in adaptive evolution. Molecular Ecology, 31(7), 1928-1938. doi:10.1111/mec.16377, Institutional Repository
Takatsu, K. (2022). Predator cannibalism can shift prey community composition toward dominance by small prey species. Ecology and Evolution, 12(5), e8894 (11 pp.). doi:10.1002/ece3.8894, Institutional Repository
Takatsu, K., Selz, O. M., & Brodersen, J. (2022). Temperature regime during embryogenesis alters subsequent behavioural phenotypes of juvenile brown trout. Biology Letters, 18(11), 20220369 (7 pp.). doi:10.1098/rsbl.2022.0369, Institutional Repository
Tavella, J., Windsor, F. M., Rother, D. C., Evans, D. M., Guimarães, P. R., Palacios, T. P., … Devoto, M. (2022). Using motifs in ecological networks to identify the role of plants in crop margins for multiple agriculture functions. Agriculture, Ecosystems and Environment, 331, 107912 (4 pp.). doi:10.1016/j.agee.2022.107912, Institutional Repository
Twining, C. W., Shipley, J. R., & Matthews, B. (2022). Climate change creates nutritional phenological mismatches. Trends in Ecology and Evolution, 37(9), 736-739. doi:10.1016/j.tree.2022.06.009, Institutional Repository
Twining, C. W., Weber, C., Kowarik, C., Gossner, M. M., Graham, C. H., Matthews, B., & Shipley, J. R. (2022). Zum Fressen gern: unsere Gewässer aus der Vogelperspektive. Wasser, Energie, Luft, 114(2), 68-74. , Institutional Repository
Vahdati, A. R., & Melián, C. J. (2022). EvoDynamics.jl: a framework for modeling eco-evolutionary dynamics. Journal of Open Source Software, 7(79), 4775 (3 pp.). doi:10.21105/joss.04775, Institutional Repository
Vonlanthen, P., Périat, G., & Seehausen, O. (2022). Standardisierte Befischung. Methode zur Erhebung des Fischbestands in stehenden Gewässern. Aqua & Gas, 102(4), 20-27. , Institutional Repository
ten Brink, H., & Seehausen, O. (2022). Competition among small individuals hinders adaptive radiation despite ecological opportunity. Proceedings of the Royal Society B: Biological Sciences, 289(1971), 20212655 (10 pp.). doi:10.1098/rspb.2021.2655, Institutional Repository
van Rijssel, J. C., Moser, F. N., Mwaiko, S., & Seehausen, O. (2022). Strong species structure but weak geographical structure in demersal Lake Victoria cichlids. Ecology and Evolution, 12(12), e9669 (12 pp.). doi:10.1002/ece3.9669, Institutional Repository

Publications 2021

Peer reviewed journals

Liu, Z., Roesti, M., Marques, D., Hiltbrunner, M., Saladin, V., & Peichel, C. L. (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback. Molecular Biology and Evolution, 39(2), msab358 (16 pp.). doi:10.1093/molbev/msab358, Institutional Repository
Anjos, M. da S., Jardim de Queiroz, L., Penido, I. de S., Bitencourt, J. de A., Barreto, S. B., Sarmento-Soares, L. M., … Affonso, P. R. A. de M. (2021). A taxonomically complex catfish group from an underrepresented geographic area: systematics and species limits in Hypostomus Lacépède, 1803 (Siluriformes, Loricariidae) from Eastern South America. Journal of Zoological Systematics and Evolutionary Research, 59(8), 1994-2009. doi:10.1111/jzs.12572, Institutional Repository
Alexander, T., & Seehausen, O. (2021). Diversity, distribution and community composition of fish in perialpine lakes. "Projet Lac" synthesis report. doi:10.55408/eawag:24051, Institutional Repository
Moor, H., Gossner, M. M., Graham, C., Hobi, M. L., Holderegger, R., Reber, U., … Shipley, R. (2021). Biodiversitätsschutz dank Ökosystem-übergreifendem Denken. Forschungsinitiative Blau-Grüne Biodiversität (BGB). Aqua & Gas, 101(12), 44-49. , Institutional Repository
Lafuente, E., Lürig, M. D., Rövekamp, M., Matthews, B., Buser, C., Vorburger, C., & Räsänen, K. (2021). Building on 150 years of knowledge: the freshwater isopod Asellus aquaticus as an integrative eco-evolutionary model system. Frontiers in Ecology and Evolution, 9, 748212 (23 pp.). doi:10.3389/fevo.2021.748212, Institutional Repository
Chaparro Pedraza, P. C., Matthews, B., de Meester, L., & Dakos, V. (2021). Adaptive evolution can both prevent ecosystem collapse and delay ecosystem recovery. American Naturalist, 198(6), E186-E197. doi:10.1086/716929, Institutional Repository
Meister, J., Moldenhauer-Roth, A., Beck, C., Selz, O. M., Peter, A., Albayrak, I., & Boes, R. M. (2021). Protection and guidance of downstream moving fish with electrified horizontal bar rack bypass systems. Water, 13(19), 2786 (25 pp.). doi:10.3390/w13192786, Institutional Repository
Meister, J., Beck, C., Albayrak, I., Boes, R. M., Selz, O. M., & Peter, A. (2021). Bemessungsempfehlungen für den Fischschutz mit Horizontalrechen-Bypass-Systemen. WasserWirtschaft, 111(9-10), 28-33. doi:10.1007/s35147-021-0886-4, Institutional Repository
Russo, S., Besmer, M. D., Blumensaat, F., Bouffard, D., Disch, A., Hammes, F., … Villez, K. (2021). The value of human data annotation for machine learning based anomaly detection in environmental systems. Water Research, 206, 117695 (10 pp.). doi:10.1016/j.watres.2021.117695, Institutional Repository
Lustosa-Costa, S. Y., Bogan, S., Jardim de Queiroz, L., Montoya-Burgos, J. I., Paracampo, A., Maiztegui, T., & Cardoso, Y. P. (2021). Distribution extension of Hypostomus uruguayensis (Siluriformes: Loricariidae) in Argentina and first record for Bolivia. Molecular, morphology and biogeography data. Zootaxa, 4996(1), 194-198. doi:10.11646/zootaxa.4996.1.12, Institutional Repository
Klein, K., Kokko, H., & ten Brink, H. (2021). Disentangling verbal arguments: intralocus sexual conflict in haplodiploids. American Naturalist, 198(6), 679-693. doi:10.1086/716908, Institutional Repository
Moosmann, M., Cuenca-Cambronero, M., De Lisle, S., Greenway, R., Hudson, C. M., Lürig, M., & Matthews, B. (2021). On the evolution of trophic position. Ecology Letters, 24(12), 2549-2562. doi:10.1111/ele.13888, Institutional Repository
Natugonza, V., Musinguzi, L., Kishe, M. A., van Rijssel, J. C., Seehausen, O., & Ogutu-Ohwayo, R. (2021). The consequences of anthropogenic stressors on cichlid fish communities: revisiting Lakes Victoria, Kyoga, and Nabugabo. In M. E. Abate & D. L. G. Noakes (Eds.), Fish & fisheries series: Vol. 40. The behavior, ecology and evolution of cichlid fishes (pp. 217-246). doi:10.1007/978-94-024-2080-7_7, Institutional Repository
Saboret, G., Dermond, P., & Brodersen, J. (2021). Using PIT-tags and portable antennas for quantification of fish movement and survival in streams under different environmental conditions. Journal of Fish Biology, 99(2), 581-595. doi:10.1111/jfb.14747, Institutional Repository
Twining, C. W., Parmar, T. P., Margaux, M. R., Kainz, M. J., Shipley, J. R., & Martin-Creuzburg, D. (2021). Use of fatty acids from aquatic prey varies with foraging strategy. Frontiers in Ecology and Evolution, 9, 735350 (12 pp.). doi:10.3389/fevo.2021.735350, Institutional Repository
Caradima, B., Scheidegger, A., Brodersen, J., & Schuwirth, N. (2021). Bridging mechanistic conceptual models and statistical species distribution models of riverine fish. Ecological Modelling, 457, 109680 (15 pp.). doi:10.1016/j.ecolmodel.2021.109680, Institutional Repository
Freudiger, A., Josi, D., Thünken, T., Herder, F., Flury, J. M., Marques, D. A., … Frommen, J. G. (2021). Ecological variation drives morphological differentiation in a highly social vertebrate. Functional Ecology, 35(10), 2266-2281. doi:10.1111/1365-2435.13857, Institutional Repository
Excofffier, L., Marchi, N., Marques, D. A., Matthey-Doret, R., Gouy, A., & Sousa, V. C. (2021). fastsimcoal2: demographic inference under complex evolutionary scenarios. Bioinformatics, 37(24), 4882-4885. doi:10.1093/bioinformatics/btab468, Institutional Repository
Ehrenfels, B., Bartosiewicz, M., Mbonde, A. S., Baumann, K. B. L., Dinkel, C., Junker, J., … Wehrli, B. (2021). Diazotrophic cyanobacteria are associated with a low nitrate resupply to surface waters in Lake Tanganyika. Frontiers in Environmental Science, 9, 716765 (16 pp.). doi:10.3389/fenvs.2021.716765, Institutional Repository
Chaparro-Pedraza, P. C. (2021). Fast environmental change and eco-evolutionary feedbacks can drive regime shifts in ecosystems before tipping points are crossed. Proceedings of the Royal Society B: Biological Sciences, 288(1955), 20211192 (10 pp.). doi:10.1098/rspb.2021.1192, Institutional Repository
Monchamp, M. È., Bruel, R., Frossard, V., McGowan, S., Lavrieux, M., Muschick, M., … Dubois, N. (2021). Paleoecological evidence for a multi-trophic regime shift in a perialpine lake (Lake Joux, Switzerland). Anthropocene, 35, 100301 (13 pp.). doi:10.1016/j.ancene.2021.100301, Institutional Repository
Ishak, M., Norhisham, A. R., Thomas, S. M., Nurhidayu, S., Ghazali, A., & Azhar, B. (2021). Physicochemical properties as driver of odonata diversity in oil palm waterways. Frontiers in Forests and Global Change, 4, 613064 (13 pp.). doi:10.3389/ffgc.2021.613064, Institutional Repository
Borko, Š., Trontelj, P., Seehausen, O., Moškrič, A., & Fišer, C. (2021). A subterranean adaptive radiation of amphipods in Europe. Nature Communications, 12, 3688 (12 pp.). doi:10.1038/s41467-021-24023-w, Institutional Repository
Twining, C. W., Bernhardt, J. R., Derry, A. M., Hudson, C. M., Ishikawa, A., Kabeya, N., … Matthews, B. (2021). The evolutionary ecology of fatty-acid variation: implications for consumer adaptation and diversification. Ecology Letters, 24(8), 1709-1731. doi:10.1111/ele.13771, Institutional Repository
Cuenca-Cambronero, M., Pantel, J. H., Marshall, H., Nguyen, T. T. T., Tomero-Sanz, H., & Orsini, L. (2021). Evolutionary mechanisms underpinning fitness response to multiple stressors in Daphnia. Evolutionary Applications, 14, 2457-2469. doi:10.1111/eva.13258, Institutional Repository
Lürig, M. D., Narwani, A., Penson, H., Wehrli, B., Spaak, P., & Matthews, B. (2021). Non‐additive effects of foundation species determine the response of aquatic ecosystems to nutrient perturbation. Ecology, 102(7), e03371 (14 pp.). doi:10.1002/ecy.3371, Institutional Repository
Rochat, E. C., Brodersen, J., & Blasco-Costa, I. (2021). Conspecific migration and environmental setting determine parasite infracommunities of non-migratory individual fish. Parasitology, 148(9), 1057-1066. doi:10.1017/S0031182021000780, Institutional Repository
Belgrano, A., Novaglio, C., Svedäng, H., Villasante, S., Melián, C. J., Blenckner, T., … Tönnesson, K. (2021). Mapping and evaluating marine protected areas and ecosystem services: a transdisciplinary delphi forecasting process framework. Frontiers in Ecology and Evolution, 9, 652492 (10 pp.). doi:10.3389/fevo.2021.652492, Institutional Repository
De Busserolles, F., Cortesi, F., Fogg, L., Stieb, S. M., Luehrmann, M., & Marshall, N. J. (2021). The visual ecology of Holocentridae, a nocturnal coral reef fish family with a deep-sea-like multibank retina. Journal of Experimental Biology, 224(1), jeb233098 (22 pp.). doi:10.1242/jeb.233098, Institutional Repository
Marques, D. A., Lucek, K., Sousa, V. C., Excoffier, L., & Seehausen, O. (2021). Reply to "Re-evaluating the evidence for facilitation of stickleback speciation by admixture in the Lake Constance basin". Nature Communications, 12, 2807 (5 pp.). doi:10.1038/s41467-021-23096-x, Institutional Repository
Madeira, C., Madeira, D., Ladd, N., Schubert, C. J., Diniz, M. S., Vinagre, C., & Leal, M. C. (2021). Conserved fatty acid profiles and lipid metabolic pathways in a tropical reef fish exposed to ocean warming – an adaptation mechanism of tolerant species?. Science of the Total Environment, 782, 146738 (13 pp.). doi:10.1016/j.scitotenv.2021.146738, Institutional Repository
Svensson, E. I., Arnold, S. J., Bürger, R., Csilléry, K., Draghi, J., Henshaw, J. M., … Runemark, A. (2021). Correlational selection in the age of genomics. Nature Ecology & Evolution, 5, 562-573. doi:10.1038/s41559-021-01413-3, Institutional Repository
Seppälä, O., Çetin, C., Cereghetti, T., Feulner, P. G. D., & Adema, C. M. (2021). Examining adaptive evolution of immune activity: opportunities provided by gastropods in the age of 'omics'. Philosophical Transactions of the Royal Society B: Biological Sciences, 376(1825), 20200158 (9 pp.). doi:10.1098/rstb.2020.0158, Institutional Repository
Feller, A. F., Ogi, V., Seehausen, O., & Meier, J. I. (2021). Identification of a novel sex determining chromosome in cichlid fishes that acts as XY or ZW in different lineages. Hydrobiologia, 848, 3727-3745. doi:10.1007/s10750-021-04560-7, Institutional Repository
Baruah, G., Clements, C. F., & Ozgul, A. (2021). Effect of habitat quality and phenotypic variation on abundance- and trait-based early warning signals of population collapses. Oikos, 130(6), 850-862. doi:10.1111/oik.07925, Institutional Repository
Lürig, M. D., & Matthews, B. (2021). Dietary-based developmental plasticity affects juvenile survival in an aquatic detritivore. Proceedings of the Royal Society B: Biological Sciences, 288(1945), 20203136 (10 pp.). doi:10.1098/rspb.2020.3136, Institutional Repository
Hudson, C. M., Brown, G. P., Blennerhassett, R. A., & Shine, R. (2021). Variation in size and shape of toxin glands among cane toads from native-range and invasive populations. Scientific Reports, 11(1), 936 (11 pp.). doi:10.1038/s41598-020-80191-7, Institutional Repository
Hudson, C. M., Lucek, K., Marques, D. A., Alexander, T. J., Moosmann, M., Spaak, P., … Matthews, B. (2021). Threespine stickleback in Lake Constance: the ecology and genomic substrate of a recent invasion. Frontiers in Ecology and Evolution, 8, 611672 (22 pp.). doi:10.3389/fevo.2020.611672, Institutional Repository
Zu, P., Koch, H., Schwery, O., Pironon, S., Phillips, C., Ondo, I., … Stevenson, P. C. (2021). Pollen sterols are associated with phylogeny and environment but not with pollinator guilds. New Phytologist, 230(3), 1169-1184. doi:10.1111/nph.17227, Institutional Repository
Lürig, M. D., Best, R. J., Dakos, V., & Matthews, B. (2021). Submerged macrophytes affect the temporal variability of aquatic ecosystems. Freshwater Biology, 66(3), 421-435. doi:10.1111/fwb.13648, Institutional Repository
De‐Kayne, R., Frei, D., Greenway, R., Mendes, S. L., Retel, C., & Feulner, P. G. D. (2021). Sequencing platform shifts provide opportunities but pose challenges for combining genomic datasets. Molecular Ecology Resources, 21(3), 653-660. doi:10.1111/1755-0998.13309, Institutional Repository
Gobbin, T. P., Vanhove, M. P. M., Seehausen, O., & Maan, M. E. (2021). Microhabitat distributions and species interactions of ectoparasites on the gills of cichlid fish in Lake Victoria, Tanzania. International Journal for Parasitology, 51(2-3), 201-214. doi:10.1016/j.ijpara.2020.09.001, Institutional Repository
Pegado, T., Brabo, L., Schmid, K., Sarti, F., Gava, T. T., Nunes, J., … Giarrizzo, T. (2021). Ingestion of microplastics by Hypanus guttatus stingrays in the Western Atlantic Ocean (Brazilian Amazon Coast). Marine Pollution Bulletin, 162, 111799 (6 pp.). doi:10.1016/j.marpolbul.2020.111799, Institutional Repository
Keva, O., Taipale, S. J., Hayden, B., Thomas, S. M., Vesterinen, J., Kankaala, P., & Kahilainen, K. K. (2021). Increasing temperature and productivity change biomass, trophic pyramids and community-level omega-3 fatty acid content in subarctic lake food webs. Global Change Biology, 27(2), 282-296. doi:10.1111/gcb.15387, Institutional Repository
Gobbin, T. P., Tiemersma, R., Leone, G., Seehausen, O., & Maan, M. E. (2021). Patterns of ectoparasite infection in wild-caught and laboratory-bred cichlid fish, and their hybrids, implicate extrinsic rather than intrinsic causes of species differences in infection. Hydrobiologia, 848, 3817-3831. doi:10.1007/s10750-020-04423-7, Institutional Repository
Singh, P., & Baruah, G. (2021). Higher order interactions and species coexistence. Theoretical Ecology, 14, 71-83. doi:10.1007/s12080-020-00481-8, Institutional Repository

Publications 2020

peer reviewed journals

Albayrak, I., Boes, R. M., Kriewitz-Byun, C. R., Peter, A., & Tullis, B. P. (2020). Fish guidance structures: hydraulic performance and fish guidance efficiencies. Journal of Ecohydraulics, 5(2), 113-131. doi:10.1080/24705357.2019.1677181, Institutional Repository
Alila, D. O. (2020). Comparison of abundance and diversity of small mammals between the Wooded Grassland and Primary Forest in Pande Game Reserve, Tanzania. Tanzania Journal of Science and Technology, 3(1), 17-28. Retrieved from https://journals.out.ac.tz/index.php/tjst/article/view/800, Institutional Repository
Beck, C., Albayrak, I., Meister, J., Peter, A., Selz, O. M., Leuch, C., … Boes, R. M. (2020). Swimming behavior of downstream moving fish at innovative curved-bar rack bypass systems for fish protection at water intakes. Water, 12(11), 3244 (25 pp.). doi:10.3390/w12113244, Institutional Repository
Blackman, R. C., Bruder, A., Burdon, F. J., Convey, P., Funk, W. C., Jähnig, S. C., … Altermatt, F. (2020). A meeting framework for inclusive and sustainable science. Nature Ecology & Evolution, 4, 668-671. doi:10.1038/s41559-020-1190-x, Institutional Repository
Calatayud, J., Andivia, E., Escudero, A., Melián, C. J., Bernardo-Madrid, R., Stoffel, M., … Madrigal-González, J. (2020). Positive associations among rare species and their persistence in ecological assemblages. Nature Ecology & Evolution, 4(1), 40-45. doi:10.1038/s41559-019-1053-5, Institutional Repository
Carleton, K. L., Conte, M. A., Malinsky, M., Nandamuri, S. P., Sandkam, B. A., Meier, J. I., … Kocher, T. D. (2020). Movement of transposable elements contributes to cichlid diversity. Molecular Ecology, 29(24), 4956-4969. doi:10.1111/mec.15685, Institutional Repository
Carleton, K. L., Escobar-Camacho, D., Stieb, S. M., Cortesi, F., & Marshall, N. J. (2020). Seeing the rainbow: mechanisms underlying spectral sensitivity in teleost fishes. Journal of Experimental Biology, 223(8), jeb193334 (17 pp.). doi:10.1242/jeb.193334, Institutional Repository
Clarke, G. S., Hudson, C. M., & Shine, R. (2020). Encounters between freshwater crocodiles and invasive cane toads in north-western Australia:dDoes context determine impact?. Australian Zoologist, 41(1), 94-101. doi:10.7882/AZ.2020.015, Institutional Repository
De-Kayne, R., Zoller, S., & Feulner, P. G. D. (2020). A de novo chromosome-level genome assembly of Coregonus sp. "Balchen": one representative of the Swiss Alpine whitefish radiation. Molecular Ecology Resources, 20(4), 1093-1109. doi:10.1111/1755-0998.13187, Institutional Repository
Dietz, R., Rikardsen, A. H., Biuw, M., Kleivane, L., Lehmkuhl Noer, C., Stalder, D., … Olsen, M. T. (2020). Migratory and diurnal activity of North Atlantic killer whales (Orcinus orca) off northern Norway. Journal of Experimental Marine Biology and Ecology, 533, 151456 (13 pp.). doi:10.1016/j.jembe.2020.151456, Institutional Repository
Doenz, C. J., & Seehausen, O. (2020). Rediscovery of a presumed extinct species, Salvelinus profundus, after re-oligotrophication. Ecology, 101(8), e03065 (4 pp.). doi:10.1002/ecy.3065, Institutional Repository
Eguíluz, V. M., Fernández-Gracia, J., Rodríguez, J. P., Pericàs, J. M., & Melián, C. (2020). Análisis de riesgo de segunda ola de COVID-19 en las Islas Baleares. Medicina Balear, 35(4), 27-30. , Institutional Repository
Eguíluz, V. M., Fernández-Gracia, J., Rodríguez, J. P., Pericàs, J. M., & Melián, C. (2020). Risk of secondary infection waves of COVID-19 in an Insular Region: the case of the Balearic Islands, Spain. Frontiers in Medicine, 7, 563455 (9 pp.). doi:10.3389/fmed.2020.563455, Institutional Repository
Feller, A. F., Haesler, M. P., Peichel, C. L., & Seehausen, O. (2020). Genetic architecture of a key reproductive isolation trait differs between sympatric and non-sympatric sister species of Lake Victoria cichlids. Proceedings of the Royal Society B: Biological Sciences, 287(1924), 20200270 (10 pp.). doi:10.1098/rspb.2020.0270, Institutional Repository
Feller, A. F., Selz, O. M., McGee, M. D., Meier, J. I., Mwaiko, S., & Seehausen, O. (2020). Rapid generation of ecologically relevant behavioral novelty in experimental cichlid hybrids. Ecology and Evolution, 10(14), 7445-7462. doi:10.1002/ece3.6471, Institutional Repository
Gillespie, R. G., Bennett, G. M., De Meester, L., Feder, J. L., Fleischer, R. C., Harmon, L. J., … Wogan, G. O. U. (2020). Comparing adaptive radiations across space, time, and taxa. Journal of Heredity, 111(1), 1-20. doi:10.1093/jhered/esz064, Institutional Repository
Girard, M., Goulon, C., Tessier, A., Vonlanthen, P., & Guillard, J. (2020). Comparisons of day-time and night-time hydroacoustic surveys in temperate lakes. Aquatic Living Resources, 33, 9 (9 pp.). doi:10.1051/alr/2020011, Institutional Repository
Gobbin, T. P., Vanhove, M. P. M., Pariselle, A., Groothuis, T. G. G., Maan, M. E., & Seehausen, O. (2020). Temporally consistent species differences in parasite infection but no evidence for rapid parasite-mediated speciation in Lake Victoria cichlid fish. Journal of Evolutionary Biology, 33(5), 556-575. doi:10.1111/jeb.13615, Institutional Repository
Guntern, J., Eichler, A., Hagedorn, F., Pellissier, L., Schwikowski, M., Seehausen, O., … Altermatt, F. (2020). Übermässige Stickstoff- und Phosphoreinträge schädigen Biodiversität, Wald und Gewässer. Swiss Academies factsheets: Vol. 15/8. doi:10.5281/zenodo.4269631, Institutional Repository
Hansen, J. H., Skov, C., Baktoft, H., Brönmark, C., Chapman, B. B., Hulthén, K., … Brodersen, J. (2020). Ecological consequences of animal migration: prey partial migration affects predator ecology and prey communities. Ecosystems, 23, 292-306. doi:10.1007/s10021-019-00402-9, Institutional Repository
Hudson, C. M., Vidal-García, M., Murray, T. G., & Shine, R. (2020). The accelerating anuran: evolution of locomotor performance in cane toads (Rhinella marina, Bufonidae) at an invasion front. Proceedings of the Royal Society B: Biological Sci, 287(1938), 20201964 (10 pp.). doi:10.1098/rspb.2020.1964, Institutional Repository
Igarashi, Y., Shimizu, K., Mizutaka, S., & Kagawa, K. (2020). Pregnancy parturition scars in the preauricular area and the association with the total number of pregnancies and parturitions. American Journal of Physical Anthropology, 171, 260-274. doi:10.1002/ajpa.23961, Institutional Repository
Junker, J., Rick, J. A., McIntyre, P. B., Kimirei, I., Sweke, E. A., Mosille, J. B., … Wagner, C. E. (2020). Structural genomic variation leads to genetic differentiation in Lake Tanganyika's sardines. Molecular Ecology, 29(17), 3277-3298. doi:10.1111/mec.15559, Institutional Repository
Kagawa, K., & Seehausen, O. (2020). The propagation of admixture-derived adaptive radiation potential. Proceedings of the Royal Society B: Biological Sciences, 287(1934), 20200941 (9 pp.). doi:10.1098/rspb.2020.0941, Institutional Repository
Leal, M. C., Anaya-Rojas, J. M., Munro, M. H. G., Blunt, J. W., Melian, C. J., Calado, R., & Lürig, M. D. (2020). Fifty years of capacity building in the search for new marine natural products. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(39), 24165-24172. doi:10.1073/pnas.2007610117, Institutional Repository
Matthews, B., Jokela, J., Narwani, A., Räsänen, K., Pomati, F., Altermatt, F., … Vorburger, C. (2020). On biological evolution and environmental solutions. Science of the Total Environment, 724, 138194 (7 pp.). doi:10.1016/j.scitotenv.2020.138194, Institutional Repository
McGee, M. D., Borstein, S. R., Meier, J. I., Marques, D. A., Mwaiko, S., Taabu, A., … Seehausen, O. (2020). The ecological and genomic basis of explosive adaptive radiation. Nature, 586, 75-79. doi:10.1038/s41586-020-2652-7, Institutional Repository
Muschick, M., Soria-Carrasco, V., Feder, J. L., Gompert, Z., & Nosil, P. (2020). Adaptive zones shape the magnitude of premating reproductive isolation in Timema stick insects. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1806), 20190541 (10 pp.). doi:10.1098/rstb.2019.0541, Institutional Repository
Pärssinen, V., Hulthén, K., Brönmark, C., Skov, C., Brodersen, J., Baktoft, H., … Nilsson, P. A. (2020). Maladaptive migration behaviour in hybrids links to predator-mediated ecological selection. Journal of Animal Ecology, 89(11), 2596-2604. doi:10.1111/1365-2656.13308, Institutional Repository
Russo, S., Lürig, M., Hao, W., Matthews, B., & Villez, K. (2020). Active learning for anomaly detection in environmental data. Environmental Modelling and Software, 134, 104869 (11 pp.). doi:10.1016/j.envsoft.2020.104869, Institutional Repository
Selz, O. M., Dönz, C. J., Vonlanthen, P., & Seehausen, O. (2020). A taxonomic revision of the whitefish of lakes Brienz and Thun, Switzerland, with descriptions of four new species (Teleostei, Coregonidae). ZooKeys, 989, 79-162. doi:10.3897/zookeys.989.32822, Institutional Repository
Skov, C., Hansen, J. H., Baktoft, H., Brönmark, C., Brodersen, J., Chapman, B. B., … Nilsson, P. A. (2020). A field evaluation of long-term effects of PIT tagging. Journal of Fish Biology, 96, 1055-1059. doi:10.1111/jfb.14292, Institutional Repository
Stalder, D., Van Beest, F. M., Sveegaard, S., Dietz, R., Teilmann, J., & Nabe-Nielsen, J. (2020). Influence of environmental variability on harbour porpoise movement. Marine Ecology Progress Series, 648, 207-219. doi:10.3354/meps13412, Institutional Repository
Takatsu, K., & Kishida, O. (2020). Enhanced recruitment of larger predators in the presence of large prey. Journal of Animal Ecology, 89(7), 1615-1627. doi:10.1111/1365-2656.13210, Institutional Repository
Villoutreix, R., de Carvalho, C. F., Soria-Carrasco, V., Lindtke, D., De-la-Mora, M., Muschick, M., … Nosil, P. (2020). Large-scale mutation in the evolution of a gene complex for cryptic coloration. Science, 369(6502), 460-466. doi:10.1126/science.aaz4351, Institutional Repository
Weber, C., Sprecher, L., Åberg, U., Thomas, G., Baumgartner, S., & Haertel-Borer, S. (2020). Wirkungskontrollen mit Wirkung: Gemeinsam lernen für Revitalisierungen. Wasser, Energie, Luft, 112(1), 41-47. , Institutional Repository
Wetjen, M., Hübner, D., Seehausen, O., & Schulz, R. (2020). Genetic diversity of endangered Chondrostoma nasus in the River Rhine system: conservation genetics considerations on stocking and reintroduction. Knowledge and Management of Aquatic Ecosystems, 2020(421), 25(13 pp.). doi:10.1051/kmae/2020016, Institutional Repository
Wright, D. S., van Eijk, R., Schuart, L., Seehausen, O., Groothuis, T. G. G., & Maan, M. E. (2020). Testing sensory drive speciation in cichlid fish: linking light conditions to opsin expression, opsin genotype and female mate preference. Journal of Evolutionary Biology, 33(4), 422-434. doi:10.1111/jeb.13577, Institutional Repository
ten Brink, H., Onstein, R. E., & de Roos, A. M. (2020). Habitat deterioration promotes the evolution of direct development in metamorphosing species. Evolution, International Journal of Organic Evolution, 74(8), 1826-1850. doi:10.1111/evo.14040, Institutional Repository

Publications 2019

peer reviewed journals

Anaya-Rojas, J. M.; Best, R. J.; Brunner, F. S.; Eizaguirre, C.; Leal, M. C.; Melián, C. J.; Seehausen, O.; Matthews, B. (2019) An experimental test of how parasites of predators can influence trophic cascades and ecosystem functioning, Ecology, 100(8), e02744 (12 pp.), doi:10.1002/ecy.2744, Institutional Repository
Brodersen, J.; Hansen, J. H.; Skov, C. (2019) Partial nomadism in large‐bodied bream (Abramis brama), Ecology of Freshwater Fish, 28(4), 650-660, doi:10.1111/eff.12483, Institutional Repository
Costa, C. L. N.; Lemos-Costa, P.; Marquitti, F. M. D.; Fernandes, L. D.; Ramos, M. F.; Schneider, D. M.; Martins, A. B.; de Aguiar, M. A. M. (2019) Signatures of microevolutionary processes in phylogenetic patterns, Systematic Biology, 68(1), 131-144, doi:10.1093/sysbio/syy049, Institutional Repository
Day, J. J.; Ford, A. G. P.; Bullen, T. R.; Pang, L.; Genner, M. J.; Bills, R.; Flouri, T.; Ngatunga, B. P.; Rüber, L.; Schliewen, U. K.; Seehausen, O.; Shechonge, A.; Stiassny, M. L. J.; Turner, G. F. (2019) Molecular phylogeny of Oreochromis (Cichlidae: Oreochromini) reveals mito-nuclear discordance and multiple colonisation of adverse aquatic environments, Molecular Phylogenetics and Evolution, 136, 215-226, doi:10.1016/j.ympev.2019.04.008, Institutional Repository
Dermond, P.; Melián, C. J.; Brodersen, J. (2019) Size-dependent tradeoffs in seasonal freshwater environments facilitate differential salmonid migration, Movement Ecology, 7, 40 (11 pp.), doi:10.1186/s40462-019-0185-1, Institutional Repository
Dermond, P.; Sperlich, N.; Brodersen, J. (2019) Heritable morphological differentiation in salmonids from two distinct stream types, Journal of Fish Biology, 95(5), 1215-1222, doi:10.1111/jfb.14121, Institutional Repository
Doenz, C. J.; Krähenbühl, A. K.; Walker, J.; Seehausen, O.; Brodersen, J. (2019) Ecological opportunity shapes a large Arctic charr species radiation, Proceedings of the Royal Society B: Biological Sciences, 286(1913), 20191992 (10 pp.), doi:10.1098/rspb.2019.1992, Institutional Repository
Feulner, P. G. D.; Seehausen, O. (2019) Genomic insights into the vulnerability of sympatric whitefish species flocks, Molecular Ecology, 28, 615-629, doi:10.1111/mec.14977, Institutional Repository
Govaert, L.; Fronhofer, E. A.; Lion, S.; Eizaguirre, C.; Bonte, D.; Egas, M.; Hendry, A. P.; De Brito Martins, A.; Melián, C. J.; Raeymaekers, J. A. M.; Ratikainen, I. I.; Saether, B.‐E.; Schweitzer, J. A.; Matthews, B. (2019) Eco‐evolutionary feedbacks - theoretical models and perspectives, Functional Ecology, 33(1), 13-30, doi:10.1111/1365-2435.13241, Institutional Repository
Hansen, J. H.; Brodersen, J.; Baktoft, H.; Skov, C. (2019) Relationship between bream (Abramis brama) activity and water turbidity in a shallow lake under different season conditions, Journal of Limnology, 78(2), 259-269, doi:10.4081/jlimnol.2019.1883, Institutional Repository
Harmon, L. J.; Andreazzi, C. S.; Débarre, F.; Drury, J.; Goldberg, E. E.; Martins, A. B.; Melián, C. J.; Narwani, A.; Nuismer, S. L.; Pennell, M. W.; Rudman, S. M.; Seehausen, O.; Silvestro, D.; Weber, M.; Matthews, B. (2019) Detecting the macroevolutionary signal of species interactions, Journal of Evolutionary Biology, 32(8), 769-782, doi:10.1111/jeb.13477, Institutional Repository
Hayden, B.; Harrod, C.; Thomas, S. M.; Eloranta, A. P.; Myllykangas, J. -P.; Siwertsson, A.; Præbel, K.; Knudsen, R.; Amundsen, P. -A.; Kahilainen, K. K. (2019) From clear lakes to murky waters – tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning', Ecology Letters, 22(5), 807-816, doi:10.1111/ele.13238, Institutional Repository
Huang, Y.; Feulner, P. G. D.; Eizaguirre, C.; Lenz, T. L.; Bornberg-Bauer, E.; Milinski, M.; Reusch, T. B. H.; Chain, F. J. J. (2019) Genome-wide genotype-expression relationships reveal both copy number and single nucleotide differentiation contribute to differential gene expression between stickleback ecotypes, Genome Biology and Evolution, 11(8), 2344-2359, doi:10.1093/gbe/evz148, Institutional Repository
Ishikawa, A.; Kabeya, N.; Ikeya, K.; Kakioka, R.; Cech, J. N.; Osada, N.; Leal, M. C.; Inoue, J.; Kume, M.; Toyoda, A.; Tezuka, A.; Nagano, A. J.; Yamasaki, Y. Y.; Suzuki, Y.; Kokita, T.; Takahashi, H.; Lucek, K.; Marques, D.; Takehana, Y.; Naruse, K.; Mori, S.; Monroig, O.; Ladd, N.; Schubert, C. J.; Matthews, B.; Peichel, C. L.; Seehausen, O.; Yoshizaki, G.; Kitano, J. (2019) A key metabolic gene for recurrent freshwater colonization and radiation in fishes, Science, 364(6443), 886-889, doi:10.1126/science.aau5656, Institutional Repository
Kishe-Machumu, M. A.; Natugonza, V.; Nyingi, D. W.; Snoeks, J.; Carr, J. A.; Seehausen, O.; Sayer, C. A. (2018) The status and distribution of freshwater fishes in the Lake Victoria Basin, In: Sayer, C. A.; Máiz-Tomé, L.; Darwall, W. R. T. (Eds.), Freshwater biodiversity in the lake Victoria Basin. Guidance for species conservation, site protection, climate resilience and sustainable livelihoods, 41-64, doi:10.2305/IUCN.CH.2018.RA.2.en, Institutional Repository
Lange, K.; Wehrli, B.; Åberg, U.; Bätz, N.; Brodersen, J.; Fischer, M.; Hermoso, V.; Reidy Liermann, C.; Schmid, M.; Wilmsmeier, L.; Weber, C. (2019) Small hydropower goes unchecked, Frontiers in Ecology and the Environment, 17(5), 256-258, doi:10.1002/fee.2049, Institutional Repository
Lipshutz, S. E.; Meier, J. I.; Derryberry, G. E.; Miller, M. J.; Seehausen, O.; Derryberry, E. P. (2019) Differential introgression of a female competitive trait in a hybrid zone between sex-role reversed species, Evolution, International Journal of Organic Evolution, 73(2), 188-201, doi:10.1111/evo.13675, Institutional Repository
Meier, J. I.; Stelkens, R. B.; Joyce, D. A.; Mwaiko, S.; Phiri, N.; Schliewen, U. K.; Selz, O. M.; Wagner, C. E.; Katongo, C.; Seehausen, O. (2019) The coincidence of ecological opportunity with hybridization explains rapid adaptive radiation in Lake Mweru cichlid fishes, Nature Communications, 10, 5391 (11 pp.), doi:10.1038/s41467-019-13278-z, Institutional Repository
Madeira, C.; Mendonça, V.; Leal, M. C.; Diniz, M. S.; Cabral, H. N.; Flores, A. A. V.; Vinagre, C. (2019) Present and future invasion perspectives of an alien shrimp in South Atlantic coastal waters: an experimental assessment of functional biomarkers and thermal tolerance, Biological Invasions, 21(5), 1567-1584, doi:10.1007/s10530-019-01921-1, Institutional Repository
Mameri, D.; van Kammen, C.; Groothuis, T. G. G.; Seehausen, O.; Maan, M. E. (2019) Visual adaptation and microhabitat choice in Lake Victoria cichlid fish, Royal Society Open Science, 6(3), 181876 (8 pp.), doi:10.1098/rsos.181876, Institutional Repository
Marques, D. A.; Lucek, K.; Sousa, V. C.; Excoffier, L.; Seehausen, O. (2019) Admixture between old lineages facilitated contemporary ecological speciation in Lake Constance stickleback, Nature Communications, 10(1), 4240 (14 pp.), doi:10.1038/s41467-019-12182-w, Institutional Repository
Marques, D. A.; Meier, J. I.; Seehausen, O. (2019) A combinatorial view on speciation and adaptive radiation, Trends in Ecology and Evolution, 531-544, doi:10.1016/j.tree.2019.02.008, Institutional Repository
Musilova, Z.; Cortesi, F.; Matschiner, M.; Davies, W. I. L.; Patel, J. S.; Stieb, S. M.; de Busserolles, F.; Malmstrøm, M.; Tørresen, O. K.; Brown, C. J.; Mountford, J. K.; Hanel, R.; Stenkamp, D. L.; Jakobsen, K. S.; Carleton, K. L.; Jentoft, S.; Marshall, J.; Salzburger, W. (2019) Vision using multiple distinct rod opsins in deep-sea fishes, Science, 364(6440), 588-592, doi:10.1126/science.aav4632, Institutional Repository
Narwani, A.; Reyes, M.; Pereira, A. L.; Penson, H.; Dennis, S. R.; Derrer, S.; Spaak, P.; Matthews, B. (2019) Interactive effects of foundation species on ecosystem functioning and stability in response to disturbance, Proceedings of the Royal Society B: Biological Sciences, 286(1913), 20191857 (10 pp.), doi:10.1098/rspb.2019.1857, Institutional Repository
O'Connor, M. I.; Pennell, M. W.; Altermatt, F.; Matthews, B.; Melián, C. J.; Gonzalez, A. (2019) Principles of ecology revisited: integrating information and ecological theories for a more unified science, Frontiers in Ecology and Evolution, 7, 219 (20 pp.), doi:10.3389/fevo.2019.00219, Institutional Repository
Retel, C.; Märkle, H.; Becks, L.; Feulner, P. G. D. (2019) Ecological and evolutionary processes shaping viral genetic diversity, Viruses, 11(3), 220 (16 pp.), doi:10.3390/v11030220, Institutional Repository
Retel, C.; Kowallik, V.; Huang, W.; Werner, B.; Künzel, S.; Becks, L.; Feulner, P. G. D. (2019) The feedback between selection and demography shapes genomic diversity during coevolution, Science Advances, 5(10), eaax0530 (9 pp.), doi:10.1126/sciadv.aax0530, Institutional Repository
Rieder, J. M.; Vonlanthen, P.; Seehausen, O.; Lucek, K. (2019) Allopatric and sympatric diversification within roach (Rutilus rutilus) of large prealpine lakes, Journal of Evolutionary Biology, 32(11), 1174-1185, doi:10.1111/jeb.13502, Institutional Repository
Rougeux, C.; Gagnaire, P.‐A.; Praebel, K.; Seehausen, O.; Bernatchez, L. (2019) Polygenic selection drives the evolution of convergent transcriptomic landscapes across continents within a Nearctic sister species complex, Molecular Ecology, doi:10.1111/mec.15226, Institutional Repository
Sayer, C. A.; Carr, J. A.; Seehausen, O. (2018) Synthesis for all taxonomic groups, In: Sayer, C. A.; Máiz-Tomé, L.; Darwall, W. R. T. (Eds.), Freshwater biodiversity in the lake Victoria Basin. Guidance for species conservation, site protection, climate resilience and sustainable livelihoods, 111-129, Institutional Repository
Schmid, D. W.; McGee, M. D.; Best, R. J.; Seehausen, O.; Matthews, B. (2019) Rapid divergence of predator functional traits affects prey composition in aquatic communities, American Naturalist, 193(3), 331-345, doi:10.1086/701784, Institutional Repository
Selz, O. M.; Seehausen, O. (2019) Interspecific hybridization can generate functional novelty in cichlid fish, Proceedings of the Royal Society B: Biological Sciences, 286(1913), 20191621 (9 pp.), doi:10.1098/rspb.2019.1621, Institutional Repository
Stieb, S. M.; de Busserolles, F.; Carleton, K. L.; Cortesi, F.; Chung, W.-S.; Dalton, B. E.; Hammond, L. A.; Marshall, N. J. (2019) A detailed investigation of the visual system and visual ecology of the Barrier Reef anemonefish, Amphiprion akindynos, Scientific Reports, 9(1), 16459 (14 pp.), doi:10.1038/s41598-019-52297-0, Institutional Repository
Skov, C.; Hansen, J. H.; Baktoft, H.; Brodersen, J.; Brönmark, C.; Hansson, L.-A.; Hulthén, K.; Chapman, B. B.; Nilsson, P. A. (2019) Biomanipulating streams: a supplementary tool in lake restoration, Hydrobiologia, 829(1), 205-216, doi:10.1007/s10750-018-3832-4, Institutional Repository
Wright, D. S.; Meijer, R.; Eijk, R.; Vos, W.; Seehausen, O.; Maan, M. E. (2019) Geographic variation in opsin expression does not align with opsin genotype in Lake Victoria cichlid populations, Ecology and Evolution, 9(15), 8676-8689, doi:10.1002/ece3.5411, Institutional Repository

Publications 2018

peer reviewed journals

Boel, M.; Brodersen, J.; Koed, A.; Baktoft, H.; Post, D. M. (2018) Incidence and phenotypic variation in alewife alter the ontogenetic trajectory of young-of-the-year largemouth bass, Oikos, 127(12), 1800-1811, doi:10.1111/oik.05556, Institutional Repository
Boucher, F. C.; Démery, V.; Conti, E.; Harmon, L. J.; Uyeda, J. (2018) A general model for estimating macroevolutionary landscapes, Systematic Biology, 67(2), 304-319, doi:10.1093/sysbio/syx075, Institutional Repository
De-Kayne, R.; Feulner, P. G. D. (2018) A European whitefish linkage map and its implications for understanding genome-wide synteny between salmonids following whole genome duplication, G3: Genes, Genomes, Genetics, 8(12), 3745-3755, doi:10.1534/g3.118.200552, Institutional Repository
Dermond, P.; Thomas, S. M.; Brodersen, J. (2018) Environmental stability increases relative individual specialisation across populations of an aquatic top predator, Oikos, 127(2), 297-305, doi:10.1111/oik.04578, Institutional Repository
Dieleman, J.; Muschick, M.; Nyingi, W. D.; Verschuren, D. (2019) Species integrity and origin of Oreochromis hunteri (Pisces: Cichlidae), endemic to crater Lake Chala (Kenya–Tanzania), Hydrobiologia, 832(1), 269-282, doi:10.1007/s10750-018-3570-7, Institutional Repository
Doenz, C. J.; Bittner, D.; Vonlanthen, P.; Wagner, C. E.; Seehausen, O. (2018) Rapid buildup of sympatric species diversity in Alpine whitefish, Ecology and Evolution, 8(18), 9398-9412, doi:10.1002/ece3.4375, Institutional Repository
Feulner, P. G. D.; Schwarzer, J.; Haesler, M. P.; Meier, J. I.; Seehausen, O. (2018) A dense linkage map of Lake Victoria cichlids improved the Pundamilia genome assembly and revealed a major QTL for sex-determination, G3: Genes, Genomes, Genetics, 8(7), 2411-2420, doi:10.1534/g3.118.200207, Institutional Repository
Fowles, A. E.; Stuart-Smith, R. D.; Hill, N. A.; Thomson, R. J.; Strain, E. M. A.; Alexander, T. J.; Kirkpatrick, J.; Edgar, G. J. (2018) Interactive responses of primary producers and grazers to pollution on temperate rocky reefs, Environmental Pollution, 237, 388-395, doi:10.1016/j.envpol.2018.02.061, Institutional Repository
Frickel, J.; Feulner, P. G. D.; Karakoc, E.; Becks, L. (2018) Population size changes and selection drive patterns of parallel evolution in a host–virus system, Nature Communications, 9(1), 1760 (10 pp.), doi:10.1038/s41467-018-03990-7, Institutional Repository
Gaudard, A.; Weber, C.; Alexander, T. J.; Hunziker, S.; Schmid, M. (2018) Impacts of using lakes and rivers for extraction and disposal of heat, Wiley Interdisciplinary Reviews: Water, 5(5), e1295 (18 pp.), doi:10.1002/wat2.1295, Institutional Repository
Kagawa, K.; Takimoto, G. (2018) Hybridization can promote adaptive radiation by means of transgressive segregation, Ecology Letters, 21(2), 264-274, doi:10.1111/ele.12891, Institutional Repository
Kahilainen, K. K.; Thomas, S. M.; Harrod, C.; Hayden, B.; Eloranta, A. P. (2018) Trophic ecology of piscivorous Arctic charr (Salvelinus alpinus (L.)) in subarctic lakes with contrasting food-web structures, Hydrobiologia, 840(1), 227-243, doi:10.1007/s10750-018-3845-z, Institutional Repository
Karvonen, A.; Wagner, C. E.; Selz, O. M.; Seehausen, O. (2018) Divergent parasite infections in sympatric cichlid species in Lake Victoria, Journal of Evolutionary Biology, 31(9), 1313-1329, doi:10.1111/jeb.13304, Institutional Repository
Kovac, R.; Boileau, N.; Muschick, M.; Salzburger, W. (2019) The diverse prey spectrum of the Tanganyikan scale-eater Perissodus microlepis (Boulenger, 1898), Hydrobiologia, 832(1), 85-92, doi:10.1007/s10750-018-3714-9, Institutional Repository
Krähenbühl, A. K. (2018) The adaptive radiation of Arctic charr Salvelinus alpinus (L.) in one drainage system in Southern Greenland, 75 p, Institutional Repository
Lange, K.; Meier, P.; Trautwein, C.; Schmid, M.; Robinson, C. T.; Weber, C.; Brodersen, J. (2018) Basin-scale effects of small hydropower on biodiversity dynamics, Frontiers in Ecology and the Environment, 16(7), 397-404, doi:10.1002/fee.1823, Institutional Repository
Lange, K.; Bruder, A.; Matthaei, C. D.; Brodersen, J.; Paterson, R. A. (2018) Multiple-stressor effects on freshwater fish: importance of taxonomy and life stage, Fish and Fisheries, 19(6), 974-983, doi:10.1111/faf.12305, Institutional Repository
Lemoine, M.; Barluenga, M.; Lucek, K.; Mwaiko, S.; Haesler, M.; Chapman, L. J.; Chapman, C. A.; Seehausen, O. (2018) Recent sympatric speciation involving habitat-associated nuptial colour polymorphism in a crater lake cichlid, Hydrobiologia, 832, 297-315, doi:10.1007/s10750-018-3746-1, Institutional Repository
Limberger, R.; Birtel, J.; Peter, H.; Catalán, N.; da Silva Farias, D.; Best, R. J.; Brodersen, J.; Bürgmann, H.; Matthews, B. (2019) Predator-induced changes in dissolved organic carbon dynamics, Oikos, 128(3), 430-440, doi:10.1111/oik.05673, Institutional Repository
Lucek, K.; Keller, I.; Nolte, A. W.; Seehausen, O. (2018) Distinct colonization waves underlie the diversification of the freshwater sculpin (Cottus gobio) in the Central European Alpine region, Journal of Evolutionary Biology, 31(9), 1254-1267, doi:10.1111/jeb.13339, Institutional Repository
Luehrmann, M.; Stieb, S. M.; Carleton, K. L.; Pietzker, A.; Cheney, K. L.; Marshall, N. J. (2018) Short-term colour vision plasticity on the reef: changes in opsin expression under varying light conditions differ between ecologically distinct fish species, Journal of Experimental Biology, 221(22), jeb175281 (17 pp.), doi:10.1242/jeb.175281, Institutional Repository
Maag, S.; Alexander, T. J.; Kase, R.; Hoffmann, S. (2018) Indicators for measuring the contributions of individual knowledge brokers, Environmental Science and Policy, 89, 1-9, doi:10.1016/j.envsci.2018.06.002, Institutional Repository
Madeira, C.; Mendonça, V.; Leal, M. C.; Flores, A. A. V.; Cabral, H. N.; Diniz, M. S.; Vinagre, C. (2018) Environmental health assessment of warming coastal ecosystems in the tropics – application of integrative physiological indices, Science of the Total Environment, 643, 28-39, doi:10.1016/j.scitotenv.2018.06.152, Institutional Repository
Madeira, C.; Leal, M. C.; Diniz, M. S.; Cabral, H. N.; Vinagre, C. (2018) Thermal stress and energy metabolism in two circumtropical decapod crustaceans: responses to acute temperature events, Marine Environmental Research, 141, 148-158, doi:10.1016/j.marenvres.2018.08.015, Institutional Repository
Marques, D. A.; Jones, F. C.; Di Palma, F.; Kingsley, D. M.; Reimchen, T. E. (2018) Experimental evidence for rapid genomic adaptation to a new niche in an adaptive radiation, Nature Ecology & Evolution, 2(7), 1130-1140, doi:10.1038/s41559-018-0581-8, Institutional Repository
Matthews, B.; Best, R. J.; Feulner, P. G. D.; Narwani, A.; Limberger, R. (2018) Evolution as an ecosystem process: insights from genomics, Genome, 61(4), 298-309, doi:10.1139/gen-2017-0044, Institutional Repository
Meier, J. I.; Marques, D. A.; Wagner, C. E.; Excoffier, L.; Seehausen, O. (2018) Genomics of parallel ecological speciation in Lake Victoria cichlids, Molecular Biology and Evolution, 35(6), 1489-1506, doi:10.1093/molbev/msy051, Institutional Repository
Melián, C. J.; Matthews, B.; de Andreazzi, C. S.; Rodríguez, J. P.; Harmon, L. J.; Fortuna, M. A. (2018) Deciphering the interdependence between ecological and evolutionary networks, Trends in Ecology and Evolution, 33(7), 504-512, doi:10.1016/j.tree.2018.04.009, Institutional Repository
Moser, F. N.; van Rijssel, J. C.; Mwaiko, S.; Meier, J. I.; Ngatunga, B.; Seehausen, O. (2018) The onset of ecological diversification 50 years after colonization of a crater lake by haplochromine cichlid fishes, Proceedings of the Royal Society B: Biological Sciences, 285(1884), 20180171 (19 pp.), doi:10.1098/rspb.2018.0171, Institutional Repository
Moser, F. N.; van Rijssel, J. C.; Ngatunga, B.; Mwaiko, S.; Seehausen, O. (2019) The origin and future of an endangered crater lake endemic; phylogeography and ecology of Oreochromis hunteri and its invasive relatives, Hydrobiologia, 832(1), 283-296, doi:10.1007/s10750-018-3780-z, Institutional Repository
Muschick, M.; Russell, J. M.; Jemmi, E.; Walker, J.; Stewart, K. M.; Murray, A. M.; Dubois, N.; Stager, J. C.; Johnson, T. C.; Seehausen, O. (2018) Arrival order and release from competition does not explain why haplochromine cichlids radiated in Lake Victoria, Proceedings of the Royal Society B: Biological Sciences, 285(1878), 20180462 (9 pp.), doi:10.1098/rspb.2018.0462, Institutional Repository
Muschick, M.; Salzburger, W. (2018) Evolution: an archipelago replete with replicates, Current Biology, 28(9), R565-R567, doi:10.1016/j.cub.2018.03.032, Institutional Repository
Runemark, A.; Eroukhmanoff, F.; Nava-Bolaños, A.; Hermansen, J. S.; Meier, J. I. (2018) Hybridization, sex-specific genomic architecture and local adaptation, Philosophical Transactions of the Royal Society B: Biological Sciences, 373(1757), 20170419 (10 pp.), doi:10.1098/rstb.2017.0419, Institutional Repository
de Andreazzi, C. S.; Guimarães, P. R.; Melián, C. J. (2018) Eco-evolutionary feedbacks promote fluctuating selection and long-term stability of antagonistic networks, Proceedings of the Royal Society B: Biological Sciences, 285(1874), 20172596 (9 pp.), doi:10.1098/rspb.2017.2596, Institutional Repository
Wellig, S. D.; Nusslé, S.; Miltner, D.; Kohle, O.; Glaizot, O.; Braunisch, V.; Obrist, M. K.; Arlettaz, R. (2018) Mitigating the negative impacts of tall wind turbines on bats: vertical activity profiles and relationships to wind speed, PLoS One, 13(3), e0192493 (16 pp.), doi:10.1371/journal.pone.0192493, Institutional Repository
van Rijssel, J. C.; Moser, F. N.; Frei, D.; Seehausen, O. (2018) Prevalence of disruptive selection predicts extent of species differentiation in Lake Victoria cichlids, Proceedings of the Royal Society B: Biological Sciences, 285(1871), 20172630 (10 pp.), doi:10.1098/rspb.2017.2630, Institutional Repository

Publications 2017

peer reviewed journals

de Brito Martins, A.; Martinez de Aguiar, M. A. (2017) Barriers to gene flow and ring species formation, Evolution, International Journal of Organic Evolution, 71(2), 442-448, doi:10.1111/evo.13121, Institutional Repository
Brodersen, J.; Post, D. M.; Seehausen, O. (2018) Upward adaptive radiation cascades: predator diversification induced by prey diversification, Trends in Ecology and Evolution, 33(1), 59-70, doi:10.1016/j.tree.2017.09.016, Institutional Repository
Best, R. J.; Anaya-Rojas, J. M.; Leal, M. C.; Schmid, D. W.; Seehausen, O.; Matthews, B. (2017) Transgenerational selection driven by divergent ecological impacts of hybridizing lineages, Nature Ecology & Evolution, 1, 1757-1765, doi:10.1038/s41559-017-0308-2, Institutional Repository
Dermond, P.; Thomas, S. M.; Brodersen, J. (2018) Environmental stability increases relative individual specialisation across populations of an aquatic top predator, Oikos, 127(2), 297-305, doi:10.1111/oik.04578, Institutional Repository
Duarte, R. C.; Flores, A. A. V.; Vinagre, C.; Leal, M. C. (2017) Habitat-dependent niche partitioning between colour morphs of the algal-dwelling shrimp Hippolyte obliquimanus, Marine Biology, 164, 215 (12 pp.), doi:10.1007/s00227-017-3247-1, Institutional Repository
Edgar, G. J.; Alexander, T. J.; Lefcheck, J. S.; Bates, A. E.; Kininmonth, S. J.; Thomson, R. J.; Duffy, J. E.; Costello, M. J.; Stuart-Smith, R. D. (2017) Abundance and local-scale processes contribute to multi-phyla gradients in global marine diversity, Science Advances, 3(10), e1700419 (12 pp.), doi:10.1126/sciadv.1700419, Institutional Repository
Feulner, P. G. D.; De-Kayne, R. (2017) Genome evolution, structural rearrangements and speciation, Journal of Evolutionary Biology, 30(8), 1488-1490, doi:10.1111/jeb.13101, Institutional Repository
Hulthén, K.; Chapman, B. B.; Nilsson, P. A.; Hansson, L.-A.; Skov, C.; Brodersen, J.; Vinterstare, J.; Brönmark, C. (2017) A predation cost to bold fish in the wild, Scientific Reports, 7(1), 1239 (5 pp.), doi:10.1038/s41598-017-01270-w, Institutional Repository
Janzen, T.; Alzate, A.; Muschick, M.; Maan, M. E.; van der Plas, F.; Etienne, R. S. (2017) Community assembly in Lake Tanganyika cichlid fish: quantifying the contributions of both niche-based and neutral processes, Ecology and Evolution, 7(4), 1057-1067, doi:10.1002/ece3.2689, Institutional Repository
Kagawa, K.; Takimoto, G. (2018) Hybridization can promote adaptive radiation by means of transgressive segregation, Ecology Letters, 21(2), 264-274, doi:10.1111/ele.12891, Institutional Repository
Kahilainen, K. K.; Thomas, S. M.; Nystedt, E. K. M.; Keva, O.; Malinen, T.; Hayden, B. (2017) Ecomorphological divergence drives differential mercury bioaccumulation in polymorphic European whitefish (Coregonus lavaretus) populations of subarctic lakes, Science of the Total Environment, 599, 1768-1778, doi:10.1016/j.scitotenv.2017.05.099, Institutional Repository
Katongo, C.; Seehausen, O.; Snoeks, J. (2017) A new species of Pseudocrenilabrus (perciformes: Cichlidae) from lake Mweru in the upper Congo river system, Zootaxa, 4237(1), 181-190, doi:10.11646/zootaxa.4237.1.10, Institutional Repository
Leal, M. C.; Seehausen, O.; Matthews, B. (2017) The ecology and evolution of stoichiometric phenotypes, Trends in Ecology and Evolution, 32(2), 108-117, doi:10.1016/j.tree.2016.11.006, Institutional Repository
Leal, M. C.; Rocha, R. J. M.; Anaya-Rojas, J. M.; Cruz, I. C. S.; Ferrier-Pagès, C. (2017) Trophic and stoichiometric consequences of nutrification for the intertidal tropical zoanthid Zoanthus sociatus, Marine Pollution Bulletin, 119(1), 169-175, doi:10.1016/j.marpolbul.2017.03.054, Institutional Repository
Costa Leal, M.; Best, R. J.; Durston, D.; El-Sabaawi, R. W.; Matthews, B. (2017) Stoichiometric traits of stickleback: effects of genetic background, rearing environment, and ontogeny, Ecology and Evolution, 7(8), 2617-2625, doi:10.1002/ece3.2802, Institutional Repository
Lemos-Costa, P.; Martins, A. B.; Thompson, J. N.; de Aguiar, M. A. M. (2017) Gene flow and metacommunity arrangement affects coevolutionary dynamics at the mutualism–antagonism interface, Journal of the Royal Society Interface, 14(130), 20160989 (10 pp.), doi:10.1098/rsif.2016.0989, Institutional Repository
Lucek, K.; Greuter, L.; Selz, O. M.; Seehausen, O. (2017) Effects of interspecific gene flow on the phenotypic variance-covariance matrix in Lake Victoria Cichlids, Hydrobiologia, 791(1), 145-154, doi:10.1007/s10750-016-2838-z, Institutional Repository
Lundsgaard-Hansen, B.; Matthews, B.; Aebischer, T.; Seehausen, O. (2017) The legacy of ecosystem effects caused by adaptive radiation, Copeia, 105(3), 550-557, doi:10.1643/CE-16-514, Institutional Repository
Madeira, C.; Mendonça, V.; Leal, M. C.; Flores, A. A. V.; Cabral, H. N.; Diniz, M. S.; Vinagre, C. (2017) Thermal stress, thermal safety margins and acclimation capacity in tropical shallow waters—an experimental approach testing multiple end-points in two common fish, Ecological Indicators, 81, 146-158, doi:10.1016/j.ecolind.2017.05.050, Institutional Repository
Marques, D. A. (2017) Adaptation despite gene flow? Low recombination helps, Molecular Ecology, 26(17), 4361-4363, doi:10.1111/mec.14251, Institutional Repository
Meier, J. I.; Marques, D. A.; Mwaiko, S.; Wagner, C. E.; Excoffier, L.; Seehausen, O. (2017) Ancient hybridization fuels rapid cichlid fish adaptive radiations, Nature Communications, 8, 1-11, doi:10.1038/ncomms14363, Institutional Repository
Nilsson, P. A.; Hulthén, K.; Chapman, B. B.; Hansson, L.-A.; Brodersen, J.; Baktoft, H.; Vinterstare, J.; Brönmark, C.; Skov, C. (2017) Species integrity enhanced by a predation cost to hybrids in the wild, Biology Letters, 13(7), 20170208 (4 pp.), doi:10.1098/rsbl.2017.0208, Institutional Repository
Paillex, A.; Schuwirth, N.; Lorenz, A. W.; Januschke, K.; Peter, A.; Reichert, P. (2017) Integrating and extending ecological river assessment: concept and test with two restoration projects, Ecological Indicators, 72, 131-141, doi:10.1016/j.ecolind.2016.07.048, Institutional Repository
Peichel, C. L.; Marques, D. A. (2017) The genetic and molecular architecture of phenotypic diversity in sticklebacks, Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1713), 20150486 (8 pp.), doi:10.1098/rstb.2015.0486, Institutional Repository
Pellissier, L.; Albouy, C.; Bascompte, J.; Farwig, N.; Graham, C.; Loreau, M.; Maglianesi, M. A.; Melián, C. J.; Pitteloud, C.; Roslin, T.; Rohr, R.; Saavedra, S.; Thuiller, W.; Woodward, G.; Zimmermann, N. E.; Gravel, D. (2018) Comparing species interaction networks along environmental gradients, Biological Reviews, 93(2), 785-800, doi:10.1111/brv.12366, Institutional Repository
Rudman, S. M.; Barbour, M. A.; Csilléry, K.; Gienapp, P.; Guillaume, F.; Hairston Jr, N. G.; Hendry, A. P.; Lasky, J. R.; Rafajlović, M.; Räsänen, K.; Schmidt, P. S.; Seehausen, O.; Therkildsen, N. O.; Turcotte, M. M.; Levine, J. M. (2018) What genomic data can reveal about eco-evolutionary dynamics, Nature Ecology & Evolution, 2, 9-15, doi:10.1038/s41559-017-0385-2, Institutional Repository
Pomati, F.; Matthews, B.; Seehausen, O.; Ibelings, B. W. (2017) Eutrophication and climate warming alter spatial (depth) co-occurrence patterns of lake phytoplankton assemblages, Hydrobiologia, 787(1), 375-385, doi:10.1007/s10750-016-2981-6, Institutional Repository
Schwarz, A.-M.; Cohen, P. J.; Boso, D.; Ramofafia, C.; Alexander, T.; Bennet, G.; Andrew, N. (2017) Critical reflections from fostering adaptive community-based, co-management in Solomon Islands’ small-scale fisheries, Traditional Marine Resource Management and Knowledge Information Bulletin, 38, 14-25, Institutional Repository
Schwarzer, J.; Shabani, N.; Esmaeili, H. R.; Mwaiko, S.; Seehausen, O. (2017) Allopatric speciation in the desert: diversification of cichlids at their geographical and ecological range limit in Iran, Hydrobiologia, 791(1), 193-207, doi:10.1007/s10750-016-2976-3, Institutional Repository
Stapley, J.; Feulner, P. G. D.; Johnston, S. E.; Santure, A. W.; Smadja, C. M. (2017) Variation in recombination frequency and distribution across eukaryotes: patterns and processes, Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1736), 20160455 (10 pp.), doi:10.1098/rstb.2016.0455, Institutional Repository
Stapley, J.; Feulner, P. G. D.; Johnston, S. E.; Santure, A. W.; Smadja, C. M. (2017) Recombination: the good, the bad and the variable, Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1736), 20170279 (5 pp.), doi:10.1098/rstb.2017.0279, Institutional Repository
Sullam, K. E.; Matthews, B.; Aebischer, T.; Seehausen, O.; Bürgmann, H. (2017) The effect of top-predator presence and phenotype on aquatic microbial communities, Ecology and Evolution, 7(5), 1572-1582, doi:10.1002/ece3.2784, Institutional Repository
Svensson, O.; Woodhouse, K.; van Oosterhout, C.; Smith, A.; Turner, G. F.; Seehausen, O. (2017) The genetics of mate preferences in hybrids between two young and sympatric Lake Victoria cichlid species, Proceedings of the Royal Society B: Biological Sciences, 284(1849), 20162332 (9 pp.), doi:10.1098/rspb.2016.2332, Institutional Repository
Zupo, V.; Alexander, T. J.; Edgar, G. J. (2017) Relating trophic resources to community structure: a predictive index of food availability, Royal Society Open Science, 4(2), 160515 (18 pp.), doi:10.1098/rsos.160515, Institutional Repository

Publications 2016

peer reviewed journals

Alexander, T. J.; Vonlanthen, P.; Seehausen, O. (2017) Does eutrophication-driven evolution change aquatic ecosystems?, Philosophical Transactions of the Royal Society B: Biological Sciences, 372(1712), 20160041 (10 pp.), doi:10.1098/rstb.2016.0041, Institutional Repository
Anaya-Rojas, J. M.; Brunner, F. S.; Sommer, N.; Seehausen, O.; Eizaguirre, C.; Matthews, B. (2016) The association of feeding behaviour with the resistance and tolerance to parasites in recently diverged sticklebacks, Journal of Evolutionary Biology, 29(11), 2157-2167, doi:10.1111/jeb.12934, Institutional Repository
Brose, U.; Blanchard, J. L.; Eklöf, A.; Galiana, N.; Hartvig, M.; Hirt, M. R.; Kalinkat, G.; Nordström, M. C.; O’Gorman, E. J.; Rall, B. C.; Schneider, F. D.; Thébault, E.; Jacob, U. (2016) Predicting the consequences of species loss using size-structured biodiversity approaches, Biological Reviews, 92(2), 684-697, doi:10.1111/brv.12250, Institutional Repository
Deininger, A.; Faithfull, C. L.; Lange, K.; Bayer, T.; Vidussi, F.; Liess, A. (2016) Simulated terrestrial runoff triggered a phytoplankton succession and changed seston stoichiometry in coastal lagoon mesocosms, Marine Environmental Research, 119, 40-50, doi:10.1016/j.marenvres.2016.05.001, Institutional Repository
De Laender, F.; Rohr, J. R.; Ashauer, R.; Baird, D. J.; Berger, U.; Eisenhauer, N.; Grimm, V.; Hommen, U.; Maltby, L.; Meliàn, C. J.; Pomati, F.; Roessink, I.; Radchuk, V.; Van den Brink, P. J. (2016) Reintroducing environmental change drivers in biodiversity–ecosystem functioning research, Trends in Ecology and Evolution, 31(12), 905-915, doi:10.1016/j.tree.2016.09.007, Institutional Repository
Dijkstra, P. D.; Pierotti, M. E. R.; Seehausen, O.; Metcalfe, N. B. (2016) Metabolism, oxidative stress and territorial behaviour in a female colour polymorphic cichlid fish, Behavioral Ecology and Sociobiology, 70(1), 99-109, doi:10.1007/s00265-015-2028-4, Institutional Repository
Esmaeili, H. R.; Sayyadzadeh, G.; Seehausen, O. (2016) Iranocichla persa, a new cichlid species from southern Iran (Teleostei, Cichlidae), ZooKeys, 636, 141-161, doi:10.3897/zookeys.636.10571, Institutional Repository
Feller, A. F.; Seehausen, O.; Lucek, K.; Marques, D. A. (2016) Habitat choice and female preference in a polymorphic stickleback population, Evolutionary Ecology Research, 17, 419-435, Institutional Repository
Hines, J.; van der Putten, W. H.; De Deyn, G. B.; Wagg, C.; Voigt, W.; Mulder, C.; Weisser, W. W.; Engel, J.; Melian, C.; Scheu, S.; Birkhofer, K.; Ebeling, A.; Scherber, C.; Eisenhauer, N. (2015) Towards an integration of biodiversity–ecosystem functioning and food web theory to evaluate relationships between multiple ecosystem services, In: Woodwar, G.; Bohan, D. A. (Eds.), Ecosystem Services From Biodiversity to Society, Part 1, 161-199, doi:10.1016/bs.aecr.2015.09.001, Institutional Repository
Huang, Y.; Chain, F. J. J.; Panchal, M.; Eizaguirre, C.; Kalbe, M.; Lenz, T. L.; Samonte, I. E.; Stoll, M.; Bornberg-Bauer, E.; Reusch, T. B. H.; Milinski, M.; Feulner, P. G. D. (2016) Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks, Molecular Ecology, 25(4), 943-958, doi:10.1111/mec.13520, Institutional Repository
Winkworth-Lawrence, C.; Lange, K. (2016) Antibiotic resistance genes in freshwater biofilms may reflect influences from high-intensity agriculture, Microbial Ecology, 72(4), 763-772, doi:10.1007/s00248-016-0740-x, Institutional Repository
Hofmann, H.; Blasco-Costa, I.; Knudsen, R.; Matthaei, C. D.; Valois, A.; Lange, K. (2016) Parasite prevalence in an intermediate snail host is subject to multiple anthropogenic stressors in a New Zealand river system, Ecological Indicators, 60, 845-852, doi:10.1016/j.ecolind.2015.08.022, Institutional Repository
Kalinkat, G.; Cabral, J. S.; Darwall, W.; Ficetola, G. F.; Fisher, J. L.; Giling, D. P.; Gosselin, M.-P.; Grossart, H.-P.; Jähnig, S. C.; Jeschke, J. M.; Knopf, K.; Larsen, S.; Onandia, G.; Pätzig, M.; Saul, W.-C.; Singer, G.; Sperfeld, E.; Jarić, I. (2016) Flagship umbrella species needed for the conservation of overlooked aquatic biodiversity, Conservation Biology, 1-5, doi:10.1111/cobi.12813, Institutional Repository
Kishe-Machumu, M. A.; van Rijssel, J. C.; Poste, A.; Hecky, R. E.; Witte, F. (2017) Stable isotope evidence from formalin–ethanol-preserved specimens indicates dietary shifts and increasing diet overlap in Lake Victoria cichlids, Hydrobiologia, 791(1), 155-173, doi:10.1007/s10750-016-2925-1, Institutional Repository
Lamanna, F.; Kirschbaum, F.; Ernst, A. R. R.; Feulner, P. G. D.; Mamonekene, V.; Paul, C.; Tiedemann, R. (2016) Species delimitation and phylogenetic relationships in a genus of African weakly-electric fishes (Osteoglossiformes, Mormyridae, Campylomormyrus), Molecular Phylogenetics and Evolution, 101(August), 8-18, doi:10.1016/j.ympev.2016.04.035, Institutional Repository
Leal, M. C.; Cruz, I. C. S.; Mendes, C. R.; Calado, R.; Kikuchi, R. K. P.; Rosa, R.; Soares, A. M. V. M.; Serôdio, J.; Rocha, R. J. M. (2016) Photobiology of the zoanthid Zoanthus sociatus in intertidal and subtidal habitats, Marine and Freshwater Research, 67(12), 1991-1997, doi:10.1071/MF15300, Institutional Repository
Leal, M. C.; Ferrier-Pagès, C. (2016) Molecular trophic markers in marine food webs and their potential use for coral ecology, Marine Genomics, 29, 1-7, doi:10.1016/j.margen.2016.02.003, Institutional Repository
Leal, M. C.; Hilário, A.; Munro, M. H. G.; Brunt, J. W.; Calado, R. (2016) Natural products discovery needs improved taxonomic and geographic information, Natural Product Reports, 33(6), 747-750, doi:10.1039/c5np00130g, Institutional Repository
Leal, M. C.; Rocha, R. J. M.; Rosa, R.; Calado, R. (2018) Aquaculture of marine non-food organisms: what, why and how?, Reviews in Aquaculture, 10(2), 400-423, doi:10.1111/raq.12168, Institutional Repository
Leprieur, F.; Descombes, P.; Gaboriau, T.; Cowman, P. F.; Parravicini, V.; Kulbicki, M.; Melián, C. J.; de Santana, C. N.; Heine, C.; Mouillot, D.; Bellwood, D. R.; Pelissier, L. (2016) Plate tectonics drive tropical reef biodiversity dynamics, Nature Communications, 7, 11461 (8 pp.), doi:10.1038/ncomms11461, Institutional Repository
Lucek, K. (2016) Cryptic invasion drives phenotypic changes in central European threespine stickleback, Conservation Genetics, 17(5), 993-999, doi:10.1007/s10592-016-0837-2, Institutional Repository
Maan, M. E.; Seehausen, O.; Groothuis, T. G. G. (2017) Differential survival between visual environments supports a role of divergent sensory drive in cichlid fish speciation, American Naturalist, 189(1), 78-85, doi:10.1086/689605, Institutional Repository
Lucek, K.; Kristjánsson, B. K.; Skúlason, S.; Seehausen, O. (2016) Ecosystem size matters: the dimensionality of intralacustrine diversification in Icelandic stickleback is predicted by lake size, Ecology and Evolution, 6(15), 5256-5272, doi:10.1002/ece3.2239, Institutional Repository
Maciel, E.; Leal, M. C.; Lillebø, A. I.; Domingues, P.; Domingues, M. R.; Calado, R. (2016) Bioprospecting of marine macrophytes using MS-based lipidomics as a new approach, Marine Drugs, 14(49), 1-28, doi:10.3390/md14030049, Institutional Repository
Marques, D. A.; Lucek, K.; Meier, J. I.; Mwaiko, S.; Wagner, C. E.; Excoffier, L.; Seehausen, O. (2016) Genomics of rapid incipient speciation in sympatric threespine stickleback, PLoS Genetics, 12(2), 1-34, doi:10.1371/journal.pgen.1005887, Institutional Repository
Marques, D. A.; Lucek, K.; Haesler, M. P.; Feller, A. F.; Meier, J. I.; Wagner, C. E.; Excoffier, L.; Seehausen, O. (2016) Genomic landscape of early ecological speciation initiated by selection on nuptial colour, Molecular Ecology, 1-18, doi:10.1111/mec.13774, Institutional Repository
Matthews, B.; Aebischer, T.; Sullam, K. E.; Lundsgaard-Hansen, B.; Seehausen, O. (2016) Experimental evidence of an eco-evolutionary feedback during adaptive divergence, Current Biology, 26(4), 483-489, doi:10.1016/j.cub.2015.11.070, Institutional Repository
Meier, J. I.; Sousa, V. C.; Marques, D. A.; Selz, O. M.; Wagner, C. E.; Excoffier, L.; Seehausen, O. (2016) Demographic modelling with whole-genome data reveals parallel origin of similar Pundamilia cichlid species after hybridization, Molecular Ecology, 1-19, doi:10.1111/mec.13838, Institutional Repository
Milardi, M.; Thomas, S. M.; Kahilainen, K. K. (2016) Reliance of brown trout on terrestrial prey varies with season but not fish density, Freshwater Biology, 61(7), 1143-1156, doi:10.1111/fwb.12775, Institutional Repository
Selz, O. M.; Thommen, R.; Pierotti, M. E. R.; Anaya Rojas, J. M.; Seehausen, O. (2016) Differences in male coloration are predicted by divergent sexual selection between populations of a cichlid fish, Proceedings of the Royal Society B: Biological Sciences, 283(1830), 20160172 (9 pp.), doi:10.1098/rspb.2016.0172, Institutional Repository
Spinks, R. K.; Muschick, M.; Salzburger, W.; Gante, H. F. (2017) Singing above the chorus: cooperative Princess cichlid fish (Neolamprologus pulcher) has high pitch, Hydrobiologia, 791(1), 115-125, doi:10.1007/s10750-016-2921-5, Institutional Repository
Thomas, S. M.; Kiljunen, M.; Malinen, T.; Eloranta, A. P.; Amundsen, P.-A.; Lodenius, M.; Kahilainen, K. K. (2016) Food-web structure and mercury dynamics in a large subarctic lake following multiple species introductions, Freshwater Biology, 61(4), 500-517, doi:10.1111/fwb.12723, Institutional Repository
Thomas, S. M.; Griffiths, S. W.; Ormerod, S. J. (2016) Beyond cool: adapting upland streams for climate change using riparian woodlands, Global Change Biology, 22(1), 310-324, doi:10.1111/gcb.13103, Institutional Repository
van Rijssel, J. C.; Hecky, R. E.; Kishe-Machumu, M. A.; Witte, F. (2017) Changing ecology of Lake Victoria cichlids and their environment: evidence from C13 and N15 analyses, Hydrobiologia, 791(1), 175-191, doi:10.1007/s10750-016-2790-y, Institutional Repository
van Rijssel, J. C.; Hecky, R. E.; Kishe-Machumu, M. A.; Meijer, S. E.; Pols, J.; van Tienderen, K. M.; Ververs, J. D.; Wanink, J. H.; Witte, F. (2016) Climatic variability in combination with eutrophication drives adaptive responses in the gills of Lake Victoria cichlids, Oecologia, 182(4), 1187-1201, doi:10.1007/s00442-016-3721-3, Institutional Repository
van Zwieten, P. A. M.; Kolding, J.; Plank, M. J.; Hecky, R. E.; Bridgeman, T. B.; Macintyre, S.; Seehausen, O.; Silsbe, G. M. (2016) The Nile perch invasion in lake Victoria: cause or consequence of the haplochromine decline?, Canadian Journal of Fisheries and Aquatic Sciences, 73(4), 622-643, doi:10.1139/cjfas-2015-0130, Institutional Repository
Hudson, A. G.; Lundsgaard-Hansen, B.; Lucek, K.; Vonlanthen, P.; Seehausen, O. (2017) Managing cryptic biodiversity: fine-scale intralacustrine speciation along a benthic gradient in Alpine whitefish (Coregonus spp.), Evolutionary Applications, 10(3), 251-266, doi:10.1111/eva.12446, Institutional Repository
Wright, D. S.; Demandt, N.; Alkema, J. T.; Seehausen, O.; Groothuis, T. G. G.; Maan, M. E. (2017) Developmental effects of visual environment on species assortative mating preferences in Lake Victoria cichlid fish, Journal of Evolutionary Biology, 30(2), 289-299, doi:10.1111/jeb.13001, Institutional Repository

Publications 2015

peer reviewed journals

Alexander, T. J.; Vonlanthen, P.; Périat, G.; Degiorgi, F.; Raymond, J. C.; Seehausen, O. (2015) Estimating whole-lake fish catch per unit effort, Fisheries Research, 172, 287-303, doi:10.1016/j.fishres.2015.07.024, Institutional Repository
Brennan, A. C.; Woodward, G.; Seehausen, O.; Muñoz-Fuentes, V.; Moritz, C.; Guelmami, A.; Abbott, R. J.; Edelaar, P. (2014) Hybridization due to changing species distributions: adding problems or solutions to conservation of biodiversity during global change?, Evolutionary Ecology Research, 16(6), 475-491, Institutional Repository
Brodersen, J.; Howeth, J. G.; Post, D. M. (2015) Emergence of a novel prey life history promotes contemporary sympatric diversification in a top predator, Nature Communications, 6, 8115 (9 pp.), doi:10.1038/ncomms9115, Institutional Repository
Chapman, B. B.; Hulthén, K.; Brönmark, C.; Nilsson, P. A.; Skov, C.; Hansson, L.-A.; Brodersen, J. (2015) Shape up or ship out: migratory behaviour predicts morphology across spatial scale in a freshwater fish, Journal of Animal Ecology, 84(5), 1187-1193, doi:10.1111/1365-2656.12374, Institutional Repository
Calado, R.; Leal, M. C. (2015) Trophic ecology of benthic marine invertebrates with bi-phasic life cycles: What are we still missing?, 1-70, doi:10.1016/bs.amb.2015.07.001, Institutional Repository
Cho, S.-W.; van Rijssel, J. C.; Witte, F.; de Bakker, M. A. G.; Richardson, M. K. (2015) The sonic hedgehog signaling pathway and the development of pharyngeal arch derivatives in Haplochromis piceatus, a Lake Victoria cichlid, Journal of Oral Biosciences, 57(3), 148-156, doi:10.1016/j.job.2015.04.001, Institutional Repository
Dijkstra, P. D.; Pierotti, M. E. R.; Seehausen, O.; Metcalfe, N. B. (2016) Metabolism, oxidative stress and territorial behaviour in a female colour polymorphic cichlid fish, Behavioral Ecology and Sociobiology, 70(1), 99-109, doi:10.1007/s00265-015-2028-4, Institutional Repository
Feulner, P. G. D.; Chain, F. J. J.; Panchal, M.; Huang, Y.; Eizaguirre, C.; Kalbe, M.; Lenz, T. L.; Samonte, I. E.; Stoll, M.; Bornberg-Bauer, E.; Reusch, T. B. H.; Milinski, M. (2015) Genomics of divergence along a continuum of parapatric population differentiation, PLoS Genetics, 11(2), 1-18, doi:10.1371/journal.pgen.1004966, Institutional Repository
Fronhofer, E. A.; Klecka, J.; Melián, C. J.; Altermatt, F. (2015) Condition-dependent movement and dispersal in experimental metacommunities, Ecology Letters, 18(9), 954-963, doi:10.1111/ele.12475, Institutional Repository
Hofmann, H.; Blasco-Costa, I.; Knudsen, R.; Matthaei, C. D.; Valois, A.; Lange, K. (2016) Parasite prevalence in an intermediate snail host is subject to multiple anthropogenic stressors in a New Zealand river system, Ecological Indicators, 60, 845-852, doi:10.1016/j.ecolind.2015.08.022, Institutional Repository
Hulthén, K.; Chapman, B. B.; Nilsson, P. A.; Vinterstare, J.; Hansson, L.-A.; Skov, C.; Brodersen, J.; Baktoft, H.; Brönmark, C. (2015) Escaping peril: perceived predation risk affects migratory propensity, Biology Letters, 11(8), 20150466 (4 pp.), doi:10.1098/rsbl.2015.0466, Institutional Repository
Kalinkat, G.; Jochum, M.; Brose, U.; Dell, A. I. (2015) Body size and the behavioral ecology of insects: linking individuals to ecological communities, Current Opinion in Insect Science, 9, 24-30, doi:10.1016/j.cois.2015.04.017, Institutional Repository
Karvonen, A.; Lucek, K.; Marques, D. A.; Seehausen, O. (2015) Divergent macroparasite infections in parapatric Swiss lake-stream pairs of threespine stickleback (Gasterosteus aculeatus), PLoS One, 10(6), e0130579 (16 pp.), doi:10.1371/journal.pone.0130579, Institutional Repository
Kishe-Machumu, M. A.; van Rijssel, J. C.; Wanink, J. H.; Witte, F. (2015) Differential recovery and spatial distribution pattern of haplochromine cichlids in the Mwanza Gulf of Lake Victoria, Journal of Great Lakes Research, 41(2), 454-462, doi:10.1016/j.jglr.2015.03.005, Institutional Repository
Lange, K.; Townsend, C. R.; Matthaei, C. D. (2016) A trait-based framework for stream algal communities, Ecology and Evolution, 6(1), 23-36, doi:10.1002/ece3.1822, Institutional Repository
Liess, A.; Rowe, O.; Francoeur, S. N.; Guo, J.; Lange, K.; Schröder, A.; Reichstein, B.; Lefèbure, R.; Deininger, A.; Mathisen, P.; Faithfull, C. L. (2016) Terrestrial runoff boosts phytoplankton in a Mediterranean coastal lagoon, but these effects do not propagate to higher trophic levels, Hydrobiologia, 766(1), 275-291, doi:10.1007/s10750-015-2461-4, Institutional Repository
Lucek, K.; Seehausen, O. (2015) Distinctive insular forms of threespine stickleback (Gasterosteus aculeatus ) from western Mediterranean islands, Conservation Genetics, 16, 1319-1333, doi:10.1007/s10592-015-0742-0, Institutional Repository
Matthaei, C. D.; Lange, K. (2016) Multiple-stressor effects on freshwater fish: a review and meta-analysis, In: Closs, G. P.; Krkosek, M.; Olden, J. D. (Eds.), Conservation of freshwater fishes, 178-214, Institutional Repository
McGee, M. D.; Borstein, S. R.; Neches, R. Y.; Buescher, H. H.; Seehausen, O.; Wainwright, P. C. (2015) A pharyngeal jaw evolutionary innovation facilitated extinction in Lake Victoria cichlids, Science, 350(6264), 1077-1079, doi:10.1126/science.aab0800, Institutional Repository
McGee, M. D.; Neches, R. Y.; Seehausen, O. (2016) Evaluating genomic divergence and parallelism in replicate ecomorphs from young and old cichlid adaptive radiations, Molecular Ecology, 25(1), 260-268, doi:10.1111/mec.13463, Institutional Repository
Melián, C. J.; Křivan, V.; Altermatt, F.; Starý, P.; Pellissier, L.; De Laender, F. (2015) Dispersal dynamics in food webs, American Naturalist, 185(2), 157-168, doi:10.1086/679505, Institutional Repository
Melián, C. J.; Seehausen, O.; Eguíluz, V. M.; Fortuna, M. A.; Deiner, K. (2015) Diversification and biodiversity dynamics of hot and cold spots, Ecography, 38(4), 393-401, doi:10.1111/ecog.01162, Institutional Repository
Mineta, K.; Matsumoto, T.; Osada, N.; Araki, H. (2015) Population genetics of non-genetic traits: evolutionary roles of stochasticity in gene expression, Gene, 562(1), 16-21, doi:10.1016/j.gene.2015.03.011, Institutional Repository
Paul, C.; Mamonekene, V.; Vater, M.; Feulner, P. G. D.; Engelmann, J.; Tiedemann, R.; Kirschbaum, F. (2015) Comparative histology of the adult electric organ among four species of the genus Campylomormyrus (Teleostei: Mormyridae), Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology, 201(4), 357-374, doi:10.1007/s00359-015-0995-6, Institutional Repository
Roy, D.; Lucek, K.; Walter, R. P.; Seehausen, O. (2015) Hybrid ’superswarm’ leads to rapid divergence and establishment of populations during a biological invasion, Molecular Ecology, 24(21), 5394-5411, doi:10.1111/mec.13405, Institutional Repository
Sanz-Aguilar, A.; Jovani, R.; Melián, C. J.; Pradel, R.; Tella, J. L. (2015) Multi-event capture–recapture analysis reveals individual foraging specialization in a generalist species, Ecology, 96(6), 1650-1660, doi:10.1890/14-0437.1, Institutional Repository
Schwarzer, J.; Lamboj, A.; Langen, K.; Misof, B.; Schliewen, U. K. (2015) Phylogeny and age of chromidotilapiine cichlids (Teleostei: Cichlidae), Hydrobiologia, 748, 185-199, doi:10.1007/s10750-014-1918-1, Institutional Repository
Seehausen, O. (2015) Process and pattern in cichlid radiations – inferences for understanding unusually high rates of evolutionary diversification, New Phytologist, 207(2), 304-312, doi:10.1111/nph.13450, Institutional Repository
Seehausen, O. (2015) Beauty varies with the light, Nature, 521(7550), 34-35, doi:10.1038/521034a, Institutional Repository
Stelkens, R. B.; Schmid, C.; Seehausen, O. (2015) Hybrid breakdown in cichlid fish, PLoS One, 10(5), e0127207 (11 pp.), doi:10.1371/journal.pone.0127207, Institutional Repository
Soler, G. A.; Edgar, G. J.; Thomson, R. J.; Kininmonth, S.; Campbell, S. C.; Dawson, T. P.; Barrett, N. S.; Bernard, A. T. F.; Galván, D. E.; Willis, T. J.; Alexander, T. J.; Stuart-Smith, R. D. (2015) Reef fishes at all trophic levels respond positively to effective marine protected areas, PLoS One, 10(10), e0140270 (12 pp.), doi:10.1371/journal.pone.0140270, Institutional Repository
van Rijssel, J. C.; Hoogwater, E. S.; Kishe-Machumu, M. A.; van Reenen, E.; Spits, K. V.; van der Stelt, R. C.; Wanink, J. H.; Witte, F. (2015) Fast adaptive responses in the oral jaw of Lake Victoria cichlids, Evolution, International Journal of Organic Evolution, 69(1), 179-189, doi:10.1111/evo.12561, Institutional Repository

Publications 2014

peer reviewed journals

Ahrens, D.; Schwarzer, J.; Vogler, A. P. (2014) The evolution of scarab beetles tracks the sequential rise of angiosperms and mammals, Proceedings of the Royal Society B: Biological Sciences, 281(1791), 20141470 (10 pp.), doi:10.1098/rspb.2014.1470, Institutional Repository
Alexander, T. J.; Johnson, C. R.; Haddon, M.; Barrett, N. S.; Edgar, G. J. (2014) Long-term trends in invertebrate-habitat relationships under protected and fished conditions, Marine Biology, 161(8), 1799-1808, doi:10.1007/s00227-014-2462-2, Institutional Repository
Alexander, T. J.; Vonlanthen, P.; Périat, G.; Degiorgi, F.; Raymond, J.-C.; Seehausen, O. (2015) Evaluating gillnetting protocols to characterize lacustrine fish communities, Fisheries Research, 161, 320-329, doi:10.1016/j.fishres.2014.08.009, Institutional Repository
Brawand, D.; Wagner, C. E.; Li, Y. I.; Malinsky, M.; Keller, I.; Fan, S.; Simakov, O.; Ng, A. Y.; Lim, Z. W.; Bezault, E.; Greuter, L.; Mwaiko, S.; Seehausen, O.; Di Palma, F. (2014) The genomic substrate for adaptive radiation in African cichlid fish, Nature, 513(7518), 375-381, doi:10.1038/nature13726, Institutional Repository
Brodersen, J.; Seehausen, O. (2014) Why evolutionary biologists should get seriously involved in ecological monitoring and applied biodiversity assessment programs, Evolutionary Applications, 7(9), 968-983, doi:10.1111/eva.12215, Institutional Repository
Brodersen, J.; Chapman, B. B.; Nilsson, P. A.; Skov, C.; Hansson, L.-A.; Brönmark, C. (2014) Fixed and flexible: coexistence of obligate and facultative migratory strategies in a freshwater fish, PLoS One, 9(3), e90294 (7 pp.), doi:10.1371/journal.pone.0090294, Institutional Repository
Brönmark, C.; Hulthén, K.; Nilsson, P. A.; Skov, C.; Hansson, L. A.; Brodersen, J.; Chapman, B. B. (2014) There and back again: migration in freshwater fishes, Canadian Journal of Zoology, 92(6), 467-479, doi:10.1139/cjz-2012-0277, Institutional Repository
Chain, F. J. J.; Feulner, P. G. D.; Panchal, M.; Eizaguirre, C.; Samonte, I. E.; Kalbe, M.; Lenz, T. L.; Stoll, M.; Bornberg-Bauer, E.; Milinski, M.; Reusch, T. B. H. (2014) Extensive copy-number variation of young genes across stickleback populations, PLoS Genetics, 10(12), 1-18, doi:10.1371/journal.pgen.1004830, Institutional Repository
Chain, F. J. J.; Feulner, P. G. D. (2014) Ecological and evolutionary implications of genomic structural variations, Frontiers in Genetics, 5, 326 (2 pp.), doi:10.3389/fgene.2014.00326, Institutional Repository
Cohen, P.; Tapala, S.; Rikio, A.; Kukiti, E.; Sori, F.; Hilly, Z.; Alexander, T. J.; Foale, S. (2014) Developing a common understanding of taxonomy for fisheries management in north Vella Lavella, Solomon Islands, Traditional Marine Resource Management and Knowledge Information Bulletin, 33, 3-12, Institutional Repository
Downing, A. S.; van Nes, E. H.; Balirwa, J. S.; Beuving, J.; Bwathondi, P. O. J.; Chapman, L. J.; Cornelissen, I. J. M.; Cowx, I. G.; Goudswaard, K. P. C.; Hecky, R. E.; Janse, J. H.; Janssen, A. B. G.; Kaufman, L.; Kishe-Machumu, M. A.; Kolding, J.; Ligtvoet, W.; Mbabazi, D.; Medard, M.; Mkumbo, O. C.; Mlaponi, E.; Munyaho, A. T.; Nagelkerke, L. A. J.; Ogutu-Ohwayo, R.; Ojwang, W. O.; Peter, H. K.; Schindler, D. E.; Seehausen, O.; Sharpe, D.; Silsbe, G. M.; Sitoki, L.; Tumwebaze, R.; Tweddle, D.; van de Wolfshaar, K. E.; van Dijk, H.; van Donk, E.; van Rijssel, J. C.; van Zwieten, P. A. M.; Wanink, J.; Witte, F.; Mooij, W. M. (2014) Coupled human and natural system dynamics as key to the sustainability of Lake Victoria’s ecosystem services, Ecology and Society, 19(4), 31 (18 pp.), doi:10.5751/ES-06965-190431, Institutional Repository
Hudson, A. G.; Vonlanthen, P.; Seehausen, O. (2014) Population structure, inbreeding and local adaptation within an endangered riverine specialist: the nase (Chondrostoma nasus), Conservation Genetics, 15(4), 933-951, doi:10.1007/s10592-014-0590-3, Institutional Repository
Hulthén, K.; Chapman, B. B.; Nilsson, P. A.; Hansson, L. A.; Skov, C.; Baktoft, H.; Brodersen, J.; Brönmark, C. (2014) Sex identification and PIT-tagging: tools and prospects for studying intersexual differences in freshwater fishes, Journal of Fish Biology, 84(2), 503-512, doi:10.1111/jfb.12300, Institutional Repository
Junker, J.; Heimann, F. U. M.; Hauer, C.; Turowski, J. M.; Rickenmann, D.; Zappa, M.; Peter, A. (2015) Assessing the impact of climate change on brown trout (Salmo trutta fario) recruitment, Hydrobiologia, 751(1), 1-21, doi:10.1007/s10750-014-2073-4, Institutional Repository
Klecka, J. (2014) Modelling size structured food webs using a modified niche model with two predator traits, PLoS One, 9(8), e99355 (11 pp.), doi:10.1371/journal.pone.0099355, Institutional Repository
Klecka, J.; Boukal, D. S. (2014) The effect of habitat structure on prey mortality depends on predator and prey microhabitat use, Oecologia, 176(1), 183-191, doi:10.1007/s00442-014-3007-6, Institutional Repository
Klecka, J. (2014) The role of a water bug, Sigara striata, in freshwater food webs, PeerJ, 2, e389 (16 pp.), doi:10.7717/peerj.389, Institutional Repository
Kleckova, I.; Konvicka, M.; Klecka, J. (2014) Thermoregulation and microhabitat use in mountain butterflies of the genus Erebia: importance of fine-scale habitat heterogeneity, Journal of Thermal Biology, 41(1), 50-58, doi:10.1016/j.jtherbio.2014.02.002, Institutional Repository
Lundsgaard-Hansen, B.; Matthews, B.; Seehausen, O. (2014) Ecological speciation and phenotypic plasticity affect ecosystems, Ecology, 95(10), 2723-2735, doi:10.1890/13-2338.1, Institutional Repository
Lucek, K.; Lemoine, M.; Seehausen, O. (2014) Contemporary ecotypic divergence during a recent range expansion was facilitated by adaptive introgression, Journal of Evolutionary Biology, 27(10), 2233-2248, doi:10.1111/jeb.12475, Institutional Repository
Lucek, K.; Sivasundar, A.; Kristjánsson, B. K.; Skúlason, S.; Seehausen, O. (2014) Quick divergence but slow convergence during ecotype formation in lake and stream stickleback pairs of variable age, Journal of Evolutionary Biology, 27(9), 1878-1892, doi:10.1111/jeb.12439, Institutional Repository
Lucek, K.; Sivasundar, A.; Seehausen, O. (2014) Disentangling the role of phenotypic plasticity and genetic divergence in contemporary ecotype formation during a biological invasion, Evolution, International Journal of Organic Evolution, 68(9), 2619-2632, doi:10.1111/evo.12443, Institutional Repository
Melián, C. J.; Baldó, F.; Matthews, B.; Vilas, C.; González-Ortegón, E.; Drake, P.; Williams, R. J. (2014) Individual trait variation and diversity in food webs, In: Moya-Laraño, J.; Rowntree, J.; Woodward, G. (Eds.), Eco-evolutionary dynamics, 207-241, doi:10.1016/B978-0-12-801374-8.00006-2, Institutional Repository
Moya-Laraño, J.; Bilbao-Castro, J. R.; Barrionuevo, G.; Ruiz-Lupión, D.; Casado, L. G.; Montserrat, M.; Melián, C. J.; Magalhães, S. (2014) Eco-evolutionary spatial dynamics: rapid evolution and isolation explain food web persistence, In: Moya-Laraño, J.; Rowntree, J.; Woodward, G. (Eds.), Eco-evolutionary dynamics, 75-143, doi:10.1016/B978-0-12-801374-8.00003-7, Institutional Repository
Person, E.; Bieri, M.; Peter, A.; Schleiss, A. J. (2014) Mitigation measures for fish habitat improvement in Alpine rivers affected by hydropower operations, Ecohydrology, 7(2), 580-599, doi:10.1002/eco.1380, Institutional Repository
Seehausen, O.; Butlin, R. K.; Keller, I.; Wagner, C. E.; Boughman, J. W.; Hohenlohe, P. A.; Peichel, C. L.; Saetre, G.-P.; Bank, C.; Brännström, Å.; Brelsford, A.; Clarkson, C. S.; Eroukhmanoff, F.; Feder, J. L.; Fischer, M. C.; Foote, A. D.; Franchini, P.; Jiggins, C. D.; Jones, F. C.; Lindholm, A. K.; Lucek, K.; Maan, M. E.; Marques, D. A.; Martin, S. H.; Matthews, B.; Meier, J. I.; Möst, M.; Nachman, M. W.; Nonaka, E.; Rennison, D. J.; Schwarzer, J.; Watson, E. T.; Westram, A. M.; Widmer, A. (2014) Genomics and the origin of species, Nature Reviews Genetics, 15, 176-192, doi:10.1038/nrg3644, Institutional Repository
Seehausen, O.; Wagner, C. E. (2014) Speciation in freshwater fishes, Annual Review of Ecology, Evolution, and Systematics, 45, 621-651, doi:10.1146/annurev-ecolsys-120213-091818, Institutional Repository
Selz, O. M.; Pierotti, M. E. R.; Maan, M. E.; Schmid, C.; Seehausen, O. (2014) Female preference for male color is necessary and sufficient for assortative mating in 2 cichlid sister species, Behavioral Ecology, 25(3), 612-626, doi:10.1093/beheco/aru024, Institutional Repository
Selz, O. M.; Thommen, R.; Maan, M. E.; Seehausen, O. (2014) Behavioural isolation may facilitate homoploid hybrid speciation in cichlid fish, Journal of Evolutionary Biology, 27(2), 275-289, doi:10.1111/jeb.12287, Institutional Repository
Schweizer, M.; Hertwig, S. T.; Seehausen, O. (2014) Diversity versus disparity and the role of ecological opportunity in a continental bird radiation, Journal of Biogeography, 41(7), 1301-1312, doi:10.1111/jbi.12293, Institutional Repository
Schweizer, M.; Güntert, M.; Seehausen, O.; Leuenberger, C.; Hertwig, S. T. (2014) Parallel adaptations to nectarivory in parrots, key innovations and the diversification of the Loriinae, Ecology and Evolution, 4(14), 2867-2883, doi:10.1002/ece3.1131, Institutional Repository
Thomas, G. (2014) Improving restoration practice by deriving appropriate techniques from analysing the spatial organization of river networks, Limnologica, 45, 50-60, doi:10.1016/j.limno.2013.10.003, Institutional Repository
Wagner, C. E.; Harmon, L. J.; Seehausen, O. (2014) Cichlid species-area relationships are shaped by adaptive radiations that scale with area, Ecology Letters, 17(1), 583-592, doi:10.1111/ele.12260, Institutional Repository

Publications 2013

peer reviewed journals

Alexander, T. J. (2013) Cryptic invertebrates on subtidal rocky reefs vary with microhabitat structure and protection from fishing, Marine Ecology Progress Series, 481, 93-104, doi:10.3354/meps10263, Institutional Repository
Alexander, T. J.; Gladstone, W. (2013) Assessing the effectiveness of a long-standing rocky intertidal protected area and its contribution to the regional conservation of species, habitats and assemblages, Aquatic Conservation, 23(1), 111-123, doi:10.1002/aqc.2284, Institutional Repository
Chapman, B. B.; Eriksen, A.; Baktoft, H.; Brodersen, J.; Nilsson, P. A.; Hulthen, K.; Brönmark, C.; Hansson, L.-A.; Grønkjær, P.; Skov, C. (2013) A foraging cost of migration for a partially migratory cyprinid fish, PLoS One, 8(5), e61223 (6 pp.), doi:10.1371/journal.pone.0061223, Institutional Repository
Cohen, P. J.; Alexander, T. J. (2013) Catch Rates, composition and fish size from reefs managed with periodically-harvested closures, PLoS One, 8(9), e73383 (12 pp.), doi:10.1371/journal.pone.0073383, Institutional Repository
De Laender, F.; Melian, C. J.; Bindler, R.; Van den Brink, P. J.; Daam, M.; Roussel, H.; Juselius, J.; Verschuren, D.; Janssen, C. R. (2014) The contribution of intra- and interspecific tolerance variability to biodiversity changes along toxicity gradients, Ecology Letters, 17(1), 72-81, doi:10.1111/ele.12210, Institutional Repository
Dijkstra, P. D.; Seehausen, O.; Metcalfe, N. B. (2013) Metabolic divergence between sibling species of cichlids Pundamilia nyererei and Pundamilia pundamilia, Journal of Fish Biology, 82(6), 1975-1989, doi:10.1111/jfb.12125, Institutional Repository
Hansson, L.-A.; Brodersen, J.; Chapman, B. B.; Ekvall, M. K.; Hargeby, A.; Hulthén, K.; Nicolle, A.; Nilsson, P. A.; Skov, C.; Brönmark, C. (2013) A lake as a microcosm: reflections on developments in aquatic ecology, Aquatic Ecology, 47(2), 125-135, doi:10.1007/s10452-013-9435-2, Institutional Repository
Howeth, J. G.; Weis, J. J.; Brodersen, J.; Hatton, E. C.; Post, D. M. (2013) Intraspecific phenotypic variation in a fish predator affects multitrophic lake metacommunity structure, Ecology and Evolution, 3(15), 5031-5044, doi:10.1002/ece3.878, Institutional Repository
Hudson, A. G.; Vonlanthen, P.; Bezault, E.; Seehausen, O. (2013) Genomic signatures of relaxed disruptive selection associated with speciation reversal in whitefish, BMC Evolutionary Biology, 13, 108 (18 pp.), doi:10.1186/1471-2148-13-108, Institutional Repository
Keller, I.; Alexander, J. M.; Holderegger, R.; Edwards, P. J. (2013) Widespread phenotypic and genetic divergence along altitudinal gradients in animals, Journal of Evolutionary Biology, 26(12), 2527-2543, doi:10.1111/jeb.12255, Institutional Repository
Loh, Y.-H. E.; Bezault, E.; Muenzel, F. M.; Roberts, R. B.; Swofford, R.; Barluenga, M.; Kidd, C. E.; Howe, A. E.; Di Palma, F.; Lindblad-Toh, K.; Hey, J.; Seehausen, O.; Salzburger, W.; Kocher, T. D.; Streelman, J. T. (2013) Origins of shared genetic variation in African cichlids, Molecular Biology and Evolution, 30(4), 906-917, doi:10.1093/molbev/mss326, Institutional Repository
Lucek, K.; Sivasundar, A.; Roy, D.; Seehausen, O. (2013) Repeated and predictable patterns of ecotypic differentiation during a biological invasion: lake–stream divergence in parapatric Swiss stickleback, Journal of Evolutionary Biology, 26(12), 2691-2709, doi:10.1111/jeb.12267, Institutional Repository
Lucek, K.; Lemoine, M. (2012) First record of freshwater fish on the Cape Verdean archipelago, African Zoology, 47(2), 341-344, doi:10.3377/004.047.0214, Institutional Repository
Lundsgaard-Hansen, B.; Matthews, B.; Vonlanthen, P.; Taverna, A.; Seehausen, O. (2013) Adaptive plasticity and genetic divergence in feeding efficiency during parallel adaptive radiation of whitefish (Coregonus spp.), Journal of Evolutionary Biology, 26(3), 483-498, doi:10.1111/jeb.12063, Institutional Repository
Riedl, C.; Peter, A. (2013) Timing of brown trout spawning in Alpine rivers with special consideration of egg burial depth, Ecology of Freshwater Fish, 22(3), 384-397, doi:10.1111/eff.12033, Institutional Repository
Rodríguez, R. A.; Delgado, J. D.; Herrera, A. M.; Riera, R.; Navarro, R. M.; Melián, C.; Dieguez, L.; Quirós, Á. (2013) Effects of two traits of the ecological state equation on our understanding of species coexistence and ecosystem services, Ecological Modelling, 265, 1-13, doi:10.1016/j.ecolmodel.2013.06.001, Institutional Repository
Roesch, C.; Lundsgaard-Hansen, B.; Vonlanthen, P.; Taverna, A.; Seehausen, O. (2013) Experimental evidence for trait utility of gill raker number in adaptive radiation of a north temperate fish, Journal of Evolutionary Biology, 26(7), 1578-1587, doi:10.1111/jeb.12166, Institutional Repository
Roy, D.; Seehausen, O.; Nosil, P. (2013) Sexual dimorphism dominates divergent host plant use in stick insect trophic morphology, BMC Evolutionary Biology, 13, 135 (14 pp.), doi:10.1186/1471-2148-13-135, Institutional Repository
Selz, O. M.; Lucek, K.; Young, K. A.; Seehausen, O. (2014) Relaxed trait covariance in interspecific cichlid hybrids predicts morphological diversity in adaptive radiations, Journal of Evolutionary Biology, 27(1), 11-24, doi:10.1111/jeb.12283, Institutional Repository
Siesing, P. C.; Alva-Jørgensen, J. P.; Brodersen, J.; Arpi, M.; Jensen, P. E. (2013) Rising incidence of Enterococcus species in microbiological specimens from orthopedic patients correlates to increased use of cefuroxime. A study concentrating on tissue samples, Acta Orthopaedica, 84(3), 319-322, doi:10.3109/17453674.2013.792028, Institutional Repository
Skov, C.; Chapman, B. B.; Baktoft, H.; Brodersen, J.; Brönmark, C.; Hansson, L.-A.; Hulthén, K.; Nilsson, P. A. (2013) Migration confers survival benefits against avian predators for partially migratory freshwater fish, Biology Letters, 9(2), 20121178 (4 pp.), doi:10.1098/rsbl.2012.1178, Institutional Repository
van der Sluijs, I.; Dijkstra, P. D.; Lindeyer, C. M.; Visser, B.; Smith, A. M.; Groothuis, T. G. G.; van Alphen, J. J. M.; Seehausen, O. (2013) A test of genetic association among male nuptial coloration, female mating preference, and male aggression bias within a polymorphic population of cichlid fish, Current Zoology, 59(2), 221-229, doi:10.1093/czoolo/59.2.221, Institutional Repository
Westram, A. M.; Jokela, J.; Keller, I. (2013) Hidden biodiversity in an ecologically important freshwater amphipod: differences in genetic structure between two cryptic species, PLoS One, 8(8), e69576 (11 pp.), doi:10.1371/journal.pone.0069576, Institutional Repository

Dambach, J, Raupach, MJ, Mayer, C, Schwarzer, J, Leese, F (2013) Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea), BMC Research Notes 6:75, doi:10.1186/1756-0500-6-75

Publications 2012

peer reviewed journals

Alp, M.; Keller, I.; Westram, A. M.; Robinson, C. T. (2012) How river structure and biological traits influence gene flow: a population genetic study of two stream invertebrates with differing dispersal abilities, Freshwater Biology, 57(5), 969-981, doi:10.1111/j.1365-2427.2012.02758.x, Institutional Repository
Blank, N.; Hudson, A. G.; Vonlanthen, P.; Seehausen, O.; Hammerschmidt, C. R.; Senn, D. B. (2013) Speciation leads to divergent methylmercury accumulation in sympatric whitefish, Aquatic Sciences, 75(2), 261-273, doi:10.1007/s00027-012-0271-6, Institutional Repository
Brodersen, J.; Nicolle, A.; Nilsson, P. A.; Skov, C.; Brönmark, C.; Hansson, L.-A. (2011) Interplay between temperature, fish partial migration and trophic dynamics, Oikos, 120(12), 1838-1846, doi:10.1111/j.1600-0706.2011.19433.x, Institutional Repository
Brodersen, J.; Nilsson, P. A.; Chapman, B. B.; Skov, C.; Hansson, L.-A.; Brönmark, C. (2012) Variable individual consistency in timing and destination of winter migrating fish, Biology Letters, 8(1), 21-23, doi:10.1098/rsbl.2011.0634, Institutional Repository
Brodersen, J.; Malmquist, H. J.; Landkildehus, F.; Lauridsen, T. L.; Amsinck, S. L.; Bjerring, R.; Søndergaard, M.; Johansson, L. S.; Christoffersen, K. S.; Jeppesen, E. (2012) Short-and long term niche segregation and individual specialization of brown trout (Salmo trutta) in species poor Faroese lakes, Environmental Biology of Fishes, 93(3), 305-318, doi:10.1007/s10641-011-9914-z, Institutional Repository
Castillo Cajas, R. F.; Selz, O. M.; Ripmeester, E. A. P.; Seehausen, O.; Maan, M. E. (2012) Species-specific relationships between water transparency and male coloration within and between two closely related lake Victoria cichlid species, International Journal of Evolutionary Biology, 2012, 161306 (12 pp.), doi:10.1155/2012/161306, Institutional Repository
Chapman, B. B.; Skov, C.; Hulthén, K.; Brodersen, J.; Nilsson, P. A.; Hansson, L. A.; Brönmark, C. (2012) Partial migration in fishes: definitions, methodologies and taxonomic distribution, Journal of Fish Biology, 81(2), 479-499, doi:10.1111/j.1095-8649.2012.03349.x, Institutional Repository
Chapman, B. B.; Hulthén, K.; Brodersen, J.; Nilsson, P. A.; Skov, C.; Hansson, L. A.; Brönmark, C. (2012) Partial migration in fishes: causes and consequences, Journal of Fish Biology, 81(2), 456-478, doi:10.1111/j.1095-8649.2012.03342.x, Institutional Repository
Hering, J. G.; Hoffmann, S.; Meierhofer, R.; Schmid, M.; Peter, A. J. (2012) Assessing the societal benefits of applied research and expert consulting in water science and technology, GAIA: Ecological Perspectives for Science and Society, 21(2), 95-101, doi:10.14512/gaia.21.2.6, Institutional Repository
Junker, J.; Peter, A.; Wagner, C. E.; Mwaiko, S.; Germann, B.; Seehausen, O.; Keller, I. (2012) River fragmentation increases localized population genetic structure and enhances asymmetry of dispersal in bullhead (Cottus gobio), Conservation Genetics, 13(2), 545-556, doi:10.1007/s10592-011-0306-x, Institutional Repository
Joost, S.; Kalbermatten, M.; Bezault, E.; Seehausen, O. (2012) Use of qualitative environmental and phenotypic variables in the context of allele distribution models: detecting signatures of selection in the genome of Lake Victoria cichlids, In: Pompanon, F.; Bonin, A. (Eds.), Data production and analysis in population genomics. Methods and protocols, 295-314, doi:10.1007/978-1-61779-870-2_17, Institutional Repository
Karvonen, A.; Seehausen, O. (2012) The role of parasitism in adaptive radiations - when might parasites promote and when might they constrain ecological speciation?, International Journal of Ecology, 2012, 1-20, doi:10.1155/2012/280169, Institutional Repository
Karvonen, A.; Lundsgaard-Hansen, B.; Jokela, J.; Seehausen, O. (2013) Differentiation in parasitism among ecotypes of whitefish segregating along depth gradients, Oikos, 122(1), 122-128, doi:10.1111/j.1600-0706.2012.20555.x, Institutional Repository
Keller, I.; Wagner, C. E.; Greuter, L.; Mwaiko, S.; Selz, O. M.; Sivasundar, A.; Wittwer, S.; Seehausen, O. (2013) Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes, Molecular Ecology, 22(11), 2848-2863, doi:10.1111/mec.12083, Institutional Repository
Keller, I.; Schuler, J.; Bezault, E.; Seehausen, O. (2012) Parallel divergent adaptation along replicated altitudinal gradients in Alpine trout, BMC Evolutionary Biology, 12, 210 (16 pp.), doi:10.1186/1471-2148-12-210, Institutional Repository
Liu, Y.; Keller, I.; Heckel, G. (2012) Breeding site fidelity and winter admixture in a long-distance migrant, the tufted duck (Aythya fuligula), Heredity, 109(2), 108-116, doi:10.1038/hdy.2012.19, Institutional Repository
Lucek, K.; Sivasundar, A.; Seehausen, O. (2012) Evidence of adaptive evolutionary divergence during biological invasion, PLoS One, 7(11), e49377 (6 pp.), doi:10.1371/journal.pone.0049377, Institutional Repository
Lucek, K.; Haesler, M. P.; Sivasundar, A. (2012) When phenotypes do not match genotypes - unexpected phenotypic diversity and potential environmental constraints in icelandic stickleback, Journal of Heredity, 103(4), 579-584, doi:10.1093/jhered/ess021, Institutional Repository
Maan, M. E.; Seehausen, O. (2012) Magic cues versus magic preferences in speciation, Evolutionary Ecology Research, 14, 779-785, Institutional Repository
Magalhaes, I. S.; Lundsgaard-Hansen, B.; Mwaiko, S.; Seehausen, O. (2012) Evolutionary divergence in replicate pairs of ecotypes of Lake Victoria cichlid fish, Evolutionary Ecology Research, 14(4), 381-401, Institutional Repository
Melián, C. J.; Alonso, D.; Allesina, S.; Condit, R. S.; Etienne, R. S. (2012) Does sex speed up evolutionary rate and increase biodiversity?, PLoS Computational Biology, 8(3), 1-9, doi:10.1371/journal.pcbi.1002414, Institutional Repository
Seehausen, O. (2013) Integrating ecology and genetics in speciation research. Ecological Speciation by Patrik Nosil, Trends in Ecology and Evolution, 28(1), 12-13, doi:10.1016/j.tree.2012.10.005, Institutional Repository
Taborsky, B.; Arnold, C.; Junker, J.; Tschopp, A. (2012) The early social environment affects social competence in a cooperative breeder, Animal Behaviour, 83(4), 1067-1074, doi:10.1016/j.anbehav.2012.01.037, Institutional Repository
Vonlanthen, P.; Bittner, D.; Hudson, A. G.; Young, K. A.; Müller, R.; Lundsgaard-Hansen, B.; Roy, D.; Di Piazza, S.; Largiader, C. R.; Seehausen, O. (2012) Eutrophication causes speciation reversal in whitefish adaptive radiations, Nature, 482(7385), 357-362, doi:10.1038/nature10824, Institutional Repository
Wang, L.; Si, W.; Yao, Y.; Tian, D.; Araki, H.; Yang, S. (2012) Genome-wide survey of pseudogenes in 80 fully re-sequenced Arabidopsis thaliana accessions, PLoS One, 7(12), e51769 (13 pp.), doi:10.1371/journal.pone.0051769, Institutional Repository
Wagner, C. E.; McCune, A. R.; Lovette, I. J. (2012) Recent speciation between sympatric Tanganyikan cichlid colour morphs, Molecular Ecology, 21(13), 3283-3292, doi:10.1111/j.1365-294X.2012.05607.x, Institutional Repository
Wagner, C. E.; Keller, I.; Wittwer, S.; Selz, O. M.; Mwaiko, S.; Greuter, L.; Sivasundar, A.; Seehausen, O. (2013) Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation, Molecular Ecology, 22(3), 787-798, doi:10.1111/mec.12023, Institutional Repository
Wagner, C. E.; Harmon, L. J.; Seehausen, O. (2012) Ecological opportunity and sexual selection together predict adaptive radiation, Nature, 487(7407), 366-369, doi:10.1038/nature11144, Institutional Repository
Witte, F.; Seehausen, O.; Wanink, J. H.; Kishe-Machumu, M. A.; Rensing, M.; Goldschmidt, T. (2013) Cichlid species diversity in naturally and anthropogenically turbid habitats of Lake Victoria, East Africa, Aquatic Sciences, 75(2), 169-183, doi:10.1007/s00027-012-0265-4, Institutional Repository
Weibel, D.; Peter, A. (2013) Effectiveness of different types of block ramps for fish upstream movement, Aquatic Sciences, 75(2), 251-260, doi:10.1007/s00027-012-0270-7, Institutional Repository
Zeller, M.; Lucek, K.; Haesler, M. P.; Seehausen, O.; Sivasundar, A. (2012) Signals of predation-induced directional and disruptive selection in the threespined stickleback, Evolutionary Ecology Research, 14, 193-205, Institutional Repository
Zeller, M.; Lucek, K.; Haesler, M.; Seehausen, O.; Sivasundar, A. (2012) Little evidence for a selective advantage of armour-reduced threespined stickleback individuals in an invertebrate predation experiment, Evolutionary Ecology, 26(6), 1293-1309, doi:10.1007/s10682-012-9566-2, Institutional Repository

Hering, JG, Hoehn, E, Klinke, A, Maurer, M, Peter, A, Reichert, P, Robinson, C, Schirmer, K, Schirmer, M, Stamm, C, Wehrli, B (2012) Long-Lived Infrastructure, and Increasing Needs for Integration and Adaptation in Water Management: An Illustration from Switzerland, Environ. Sci. Technol., 2012, 46 (1), pp 112–118 DOI: 10.1021/es202189s


Seehausen, O. Der Ursprung der Arten 150 Jahre nach Darwin. Pp 45-66 in Leutwyler, S. (ed) Evolution wohin? Darwins Theorie und ihre Folgen. Forum für Universität und Gesellschaft, Universität Bern  

Publications 2011

peer reviewed journals

Angelone, S.; Kienast, F.; Holderegger, R. (2011) Where movement happens: scale-dependent landscape effects on genetic differentiation in the European tree frog, Ecography, 34(5), 714-722, doi:10.1111/j.1600-0587.2010.06494.x, Institutional Repository
Bezault, E.; Mwaiko, S.; Seehausen, O. (2011) Population genomic tests of models of adaptive radiation in Lake Victoria region cichlid fish, Evolution, International Journal of Organic Evolution, 65(12), 3381-3397, doi:10.1111/j.1558-5646.2011.01417.x, Institutional Repository
Bezault, E.; Balaresque, P.; Toguyeni, A.; Fermon, Y.; Araki, H.; Baroiller, J. F.; Rognon, X. (2011) Spatial and temporal variation in population genetic structure of wild Nile tilapia (Oreochromis niloticus) across Africa, BMC Genetics, 12, 102 (16 pp.), doi:10.1186/1471-2156-12-102, Institutional Repository
Brodersen, J.; Rodriguez-Gil, J. L.; Jönsson, M.; Hansson, L.-A.; Brönmark, C.; Nilsson, P. A.; Nicolle, A.; Berglund, O. (2011) Temperature and resource availability may interactively affect over-wintering success of juvenile fish in a changing climate, PLoS One, 6(10), e24022 (9 pp.), doi:10.1371/journal.pone.0024022, Institutional Repository
Brodersen, J.; Nilsson, P. A.; Chapman, B. B.; Skov, C.; Hansson, L.-A.; Brönmark, C. (2012) Variable individual consistency in timing and destination of winter migrating fish, Biology Letters, 8(1), 21-23, doi:10.1098/rsbl.2011.0634, Institutional Repository
Davies, T. J.; Allen, A. P.; Borda-de-Água, L.; Regetz, J.; Melián, C. J. (2011) Neutral biodiversity theory can explain the imbalance of phylogenetic trees but not the tempo of their diversification, Evolution, International Journal of Organic Evolution, 65(7), 1841-1850, doi:10.1111/j.1558-5646.2011.01265.x, Institutional Repository
Haesler, M. P.; Lindeyer, C. M.; Otti, O.; Bonfils, D.; Heg, D.; Taborsky, M. (2011) Female mouthbrooders in control of pre-and postmating sexual selection, Behavioral Ecology, 22(5), 1033-1041, doi:10.1093/beheco/arr087, Institutional Repository
Joyce, D. A.; Lunt, D. H.; Genner, M. J.; Turner, G. F.; Bills, R.; Seehausen, O. (2011) Repeated colonization and hybridization in Lake Malawi cichlids, Current Biology, 21(Suppl. 3), R108-R109, doi:10.1016/j.cub.2010.11.029, Institutional Repository
Keller, I.; Seehausen, O. (2012) Thermal adaptation and ecological speciation, Molecular Ecology, 21(4), 782-799, doi:10.1111/j.1365-294X.2011.05397.x, Institutional Repository
Keller, I.; Taverna, A.; Seehausen, O. (2011) Evidence of neutral and adaptive genetic divergence between European trout populations sampled along altitudinal gradients, Molecular Ecology, 20(9), 1888-1904, doi:10.1111/j.1365-294X.2011.05067.x, Institutional Repository
Kraaijeveld, K.; Kraaijeveld-Smit, F. J. L.; Maan, M. E. (2011) Sexual selection and speciation: the comparative evidence revisited, Biological Reviews, 86(2), 367-377, doi:10.1111/j.1469-185X.2010.00150.x, Institutional Repository
Konijnendijk, N.; Joyce, D. A.; Mrosso, H. D. J.; Egas, M.; Seehausen, O. (2011) Community genetics reveal elevated levels of sympatric gene flow among morphologically similar but not among morphologically dissimilar species of Lake Victoria Cichlid Fish, International Journal of Evolutionary Biology, 1-12, doi:10.4061/2011/616320, Institutional Repository
Maan, M. E.; Seehausen, O. (2011) Ecology, sexual selection and speciation, Ecology Letters, 14(6), 591-602, doi:10.1111/j.1461-0248.2011.01606.x, Institutional Repository
Melián, C. J.; Vilas, C.; Baldó, F.; González-Ortegón, E.; Drake, P.; Williams, R. J. (2011) Eco-evolutionary dynamics of individual-based food webs, In: Belgrano, A.; Reiss, J. (Eds.), The role of body size in multispecies systems, 225-268, doi:10.1016/B978-0-12-386475-8.00006-X, Institutional Repository
Nicolle, A.; Hansson, L.-A.; Brodersen, J.; Nilsson, P. A.; Brönmark, C. (2011) Interactions between predation and resources shape zooplankton population dynamics, PLoS One, 6(1), e16534 (9 pp.), doi:10.1371/journal.pone.0016534, Institutional Repository
Satake, A.; Araki, H. (2012) Stocking of captive-bred fish can cause long-term population decline and gene pool replacement: predictions from a population dynamics model incorporating density-dependent mortality, Theoretical Ecology, 5(2), 283-296, doi:10.1007/s12080-011-0128-y, Institutional Repository
Schweizer, M.; Seehausen, O.; Hertwig, S. T. (2011) Macroevolutionary patterns in the diversification of parrots: effects of climate change, geological events and key innovations, Journal of Biogeography, 38(11), 2176-2194, doi:10.1111/j.1365-2699.2011.02555.x, Institutional Repository
Skov, C.; Baktoft, H.; Brodersen, J.; Brönmark, C.; Chapman, B. B.; Hansson, L.-A.; Anders Nilsson, P. A. (2011) Sizing up your enemy: individual predation vulnerability predicts migratory probability, Proceedings of the Royal Society B: Biological Sciences, 278(1710), 1414-1418, doi:10.1098/rspb.2010.2035, Institutional Repository
Svensson, O.; Egger, B.; Gricar, B.; Woodhouse, K.; van Oosterhout, C.; Salzburger, W.; Seehausen, O.; Turner, G. F. (2011) Segregation of species-specific male attractiveness in F2 hybrid Lake Malawi cichlid fish, International Journal of Evolutionary Biology, 1-7, doi:10.4061/2011/426179, Institutional Repository
Weber, C.; Peter, A. (2011) Success or failure? Do indicator selection and reference setting influence river rehabilitation outcome?, North American Journal of Fisheries Management, 31(3), 535-547, doi:10.1080/02755947.2011.595277, Institutional Repository
Westram, A. M.; Jokela, J.; Baumgartner, C.; Keller, I. (2011) Spatial distribution of cryptic species diversity in European freshwater amphipods (Gammarus fossarum) as revealed by pyrosequencing, PLoS One, 6(8), e23879 (6 pp.), doi:10.1371/journal.pone.0023879, Institutional Repository
Westram, A. M.; Baumgartner, C.; Keller, I.; Jokela, J. (2011) Are cryptic host species also cryptic to parasites? Host specificity and geographical distribution of acanthocephalan parasites infecting freshwater Gammarus, Infection, Genetics and Evolution, 11(5), 1083-1090, doi:10.1016/j.meegid.2011.03.024, Institutional Repository
van der Sluijs, I.; Gray, S. M.; Amorim, M. C. P.; Barber, I.; Candolin, U.; Hendry, A. P.; Krahe, R.; Maan, M. E.; Utne-Palm, A. C.; Wagner, H.-J.; Wong, B. B. M. (2011) Communication in troubled waters: responses of fish communication systems to changing environments, Evolutionary Ecology, 25(3), 623-640, doi:10.1007/s10682-010-9450-x, Institutional Repository
van Poorten, B. T.; Arlinghaus, R.; Daedlow, K.; Haertel-Borer, S. S. (2011) Social-ecological interactions, management panaceas, and the future of wild fish populations, Proceedings of the National Academy of Sciences of the United States of America PNAS, 108(30), 12554-12559, doi:10.1073/pnas.1013919108, Institutional Repository

Chapman BB, Hulthén K, Blomqvist DR, Hansson LA, Nilsson JÅ, Brodersen J, Anders Nilsson P, Skov C, Brönmark C. (2011) To boldly go: individual differences in boldness influence migratory tendency. Ecol Lett 14(9): 871-6, doi:10.1111/j.1461-0248.2011.01648.x


Liu, Y., Keller, I., Heckel, G (2011) Phylogeography of common pochard (Aythya ferina), a potentially important vector of highly pathogenic avian influenza viruses. Ecology and Evolution 1(4): 529-545. DOI: 10.1002/ece3.46

Publications 2010

peer reviewed journals

Araki, H.; Schmid, C. (2010) Is hatchery stocking a help or harm? Evidence, limitations and future directions in ecological and genetic surveys, Aquaculture, 308(Suppl. 1), S2-S11, doi:10.1016/j.aquaculture.2010.05.036, Institutional Repository
Bittner, D.; Excoffier, L.; Largiadèr, C. R. (2010) Patterns of morphological changes and hybridization between sympatric whitefish morphs (Coregonus spp.) in a Swiss lake: a role for eutrophication?, Molecular Ecology, 19(10), 2152-2167, doi:10.1111/j.1365-294X.2010.04623.x, Institutional Repository
Brown, J. L.; Maan, M. E.; Cummings, M. E.; Summers, K. (2010) Evidence for selection on coloration in a Panamanian poison frog: a coalescent-based approach, Journal of Biogeography, 37(5), 891-901, doi:10.1111/j.1365-2699.2009.02260.x, Institutional Repository
Blouin, M. S.; Thuillier, V.; Cooper, B.; Amarasinghe, V.; Cluzel, L.; Araki, H.; Grunau, C. (2010) No evidence for large differences in genomic methylation between wild and hatchery steelhead (Oncorhynchus mykiss), Canadian Journal of Fisheries and Aquatic Sciences, 67(2), 217-224, doi:10.1139/F09-174, Institutional Repository
Dijkstra, P. D.; Lindström, J.; Metcalfe, N. B.; Hemelrijk, C. K.; Brendel, M.; Seehausen, O.; Groothuis, T. G. G. (2010) Frequency-dependent social dominance in a color polymorphic cichlid fish, Evolution, International Journal of Organic Evolution, 64(10), 2797-2807, doi:10.1111/j.1558-5646.2010.01046.x, Institutional Repository
Gu, T.; Tan, S.; Gou, X.; Araki, H.; Tian, D. (2010) Avoidance of long mononucleotide repeats in codon pair usage, Genetics, 186(3), 1077-1084, doi:10.1534/genetics.110.121137, Institutional Repository
Harmon, L. J.; Losos, J. B.; Davies, T. J.; Gillespie, R. G.; Gittleman, J. L.; Jennings, W. B.; Kozak, K. H.; McPeek, M. A.; Moreno-Roark, F.; Near, T. J.; Purvis, A.; Ricklefs, R. E.; Schluter, D.; Schulte II, J. A.; Seehausen, O.; Sidlauskas, B. L.; Torres-Carvajal, O.; Weir, J. T.; Mooers, A. Ø. (2010) Early bursts of body size and shape evolution are rare in comparative data, Evolution, International Journal of Organic Evolution, 64(8), 2385-2396, doi:10.1111/j.1558-5646.2010.01025.x, Institutional Repository
Hudson, A. G.; Vonlanthen, P.; Seehausen, O. (2011) Rapid parallel adaptive radiations from a single hybridogenic ancestral population, Proceedings of the Royal Society B: Biological Sciences, 278(1702), 58-66, doi:10.1098/rspb.2010.0925, Institutional Repository
Kelly, R. P.; Oliver, T. A.; Sivasundar, A.; Palumbi, S. R. (2010) A method for detecting population genetic structure in diverse, high gene-flow species, Journal of Heredity, 101(4), 423-436, doi:10.1093/jhered/esq022, Institutional Repository
Keller, I.; Taverna, A.; Seehausen, O. (2011) A pyrosequencing assay for the rapid discrimination of mitochondrial lineages in the Salmo trutta species complex, Molecular Ecology Resources, 11(1), 196-199, doi:10.1111/j.1755-0998.2010.02897.x, Institutional Repository
Lucek, K.; Roy, D.; Bezault, E.; Sivasundar, A.; Seehausen, O. (2010) Hybridization between distant lineages increases adaptive variation during a biological invasion: stickleback in Switzerland, Molecular Ecology, 19(18), 3995-4011, doi:10.1111/j.1365-294X.2010.04781.x, Institutional Repository
Maan, M. E.; Seehausen, O. (2010) Mechanisms of species divergence through visual adaptation and sexual selection: perspectives from a cichlid model system, Current Zoology, 56(3), 285-299, doi:10.1093/czoolo/56.3.285, Institutional Repository
Maan, M. E.; Seehausen, O.; van Alphen, J. J. M. (2010) Female mating preferences and male coloration covary with water transparency in a Lake Victoria cichlid fish, Biological Journal of the Linnean Society, 99(2), 398-406, doi:10.1111/j.1095-8312.2009.01368.x, Institutional Repository
Magalhaes, I. S.; Mwaiko, S.; Seehausen, O. (2010) Sympatric colour polymorphisms associated with nonrandom gene flow in cichlid fish of Lake Victoria, Molecular Ecology, 19(16), 3285-3300, doi:10.1111/j.1365-294X.2010.04751.x, Institutional Repository
Magalhaes, I. S.; Seehausen, O. (2010) Genetics of male nuptial colour divergence between sympatric sister species of a Lake Victoria cichlid fish, Journal of Evolutionary Biology, 23(5), 914-924, doi:10.1111/j.1420-9101.2010.01960.x, Institutional Repository
Melián, C. J.; Alonso, D.; Vázquez, D. P.; Regetz, J.; Allesina, S. (2010) Frequency-dependent selection predicts patterns of radiations and biodiversity, PLoS Computational Biology, 6(8), 1-8, doi:10.1371/journal.pcbi.1000892, Institutional Repository
Melian, C. J. (2010) Community ecology: stasis, evolution or revolution? Community ecology, processes, models and applications edited by Herman A. Verhoef and Peter J. Morin, Trends in Ecology and Evolution, 25(12), 684-685, doi:10.1016/j.tree.2010.09.005, Institutional Repository
Mzighani, S. I.; Nikaido, M.; Takeda, M.; Seehausen, O.; Budeba, Y. L.; Ngatunga, B. P.; Katunzi, E. F. B.; Aibara, M.; Mizoiri, S.; Sato, T.; Tachida, H.; Okada, N. (2010) Genetic variation and demographic history of the Haplochromis laparogramma group of Lake Victoria—an analysis based on SINEs and mitochondrial DNA, Gene, 450(1–2), 39-47, doi:10.1016/j.gene.2009.10.002, Institutional Repository
Olesen, J. M.; Dupont, Y. L.; O'Gorman, E.; Ings, T. C.; Layer, K.; Melián, C. J.; Trøjelsgaard, K.; Pichler, D. E.; Rasmussen, C.; Woodward, G. (2010) From Broadstone to Zackenberg: space, time and hierarchies in ecological networks, In: Woodward, G. (Eds.), Ecological networks, 1-69, doi:10.1016/B978-0-12-381363-3.00001-0, Institutional Repository
Roy, D.; Lucek, K.; Bühler, E.; Seehausen, O. (2010) Correlating shape variation with feeding performance to test for adaptive divergence in recently invading stickleback populations from Swiss peri-alpine environments, In: Elewa, A. M. T. (Eds.), Morphometrics for nonmorphometricians, 233-257, doi:10.1007/978-3-540-95853-6_10, Institutional Repository
Robinson, C. T.; Kawecka, B.; Füreder, L.; Peter, A. (2010) Biodiversity of flora and fauna in alpine waters, In: Bundi, U. (Eds.), Alpine waters, 193-223, doi:10.1007/978-3-540-88275-6_10, Institutional Repository
Seehausen, O.; Magalhaes, I. S. (2010) Geographical mode and evolutionary mechanism of ecological speciation in cichlid fish, In: Grant, P. R.; Grant, B. R. (Eds.), In search of the causes of evolution : from field observations to mechanisms, 282-308, Institutional Repository
Sivasundar, A.; Palumbi, S. R. (2010) Life history, ecology and the biogeography of strong genetic breaks among 15 species of Pacific rockfish, Sebastes, Marine Biology, 157(7), 1433-1452, doi:10.1007/s00227-010-1419-3, Institutional Repository
Sivasundar, A.; Palumbi, S. R. (2010) Parallel amino acid replacements in the rhodopsins of the rockfishes (Sebastes spp.) associated with shifts in habitat depth, Journal of Evolutionary Biology, 23(6), 1159-1169, doi:10.1111/j.1420-9101.2010.01977.x, Institutional Repository
van der Sluijs, I.; Seehausen, O.; Van Dooren, T. J. M.; van Alphen, J. J. M. (2010) No evidence for a genetic association between female mating preference and male secondary sexual trait in a Lake Victoria cichlid fish, Current Zoology, 56(1), 57-64, doi:10.1093/czoolo/56.1.57, Institutional Repository
Westram, A. M.; Jokela, J.; Keller, I. (2010) Isolation and characterization of ten polymorphic microsatellite markers for three cryptic Gammarus fossarum (Amphipoda) species, Conservation Genetics Resources, 2(S1), 401-404, doi:10.1007/s12686-010-9287-1, Institutional Repository
Wang, W.-K.; Ho, C.-W.; Hung, K.-H.; Wang, K.-H.; Huang, C.-C.; Araki, H.; Hwang, C.-C.; Hsu, T.-W.; Osada, N.; Chiang, T.-Y. (2010) Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: evidence of genome-wide admixture, New Phytologist, 188(2), 488-500, doi:10.1111/j.1469-8137.2010.03383.x, Institutional Repository
Young, K. A.; Genner, M. J.; Haesler, M. P.; Joyce, D. A. (2010) Sequential female assessment drives complex sexual selection on bower shape in a cichlid fish, Evolution, International Journal of Organic Evolution, 64(8), 2246-2253, doi:10.1111/j.1558-5646.2010.00984.x, Institutional Repository
Yue, J.-X.; Li, J.; Wang, D.; Araki, H.; Tian, D.; Yang, S. (2010) Genome-wide investigation reveals high evolutionary rates in annual model plants, BMC Plant Biology, 10, 242 (12 pp.), doi:10.1186/1471-2229-10-242, Institutional Repository

Publications 2009

peer reviewed journals

Araki, H.; Cooper, B.; Blouin, M. S. (2009) Carry-over effect of captive breeding reduces reproductive fitness of wild-born descendants in the wild, Biology Letters, 5(5), 621-624, doi:10.1098/rsbl.2009.0315, Institutional Repository
Baroiller, J. F.; D'Cotta, H.; Bezault, E.; Wessels, S.; Hoerstgen-Schwark, G. (2009) Tilapia sex determination: where temperature and genetics meet, Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 153(1), 30-38, doi:10.1016/j.cbpa.2008.11.018, Institutional Repository
Blais, J.; Plenderleith, M.; Rico, C.; Taylor, M. I.; Seehausen, O.; van Oosterhout, C.; Turner, G. F. (2009) Assortative mating among Lake Malawi cichlid fish populations is not simply predictable from male nuptial colour, BMC Evolutionary Biology, 9, 53 (12 pp.), doi:10.1186/1471-2148-9-53, Institutional Repository
Dijkstra, P. D.; Van Dijk, S.; Groothuis, T. G. G.; Pierotti, M. E. R.; Seehausen, O. (2009) Behavioral dominance between female color morphs of a Lake Victoria cichlid fish, Behavioral Ecology, 20(3), 593-600, doi:10.1093/beheco/arp036, Institutional Repository
Genner, M. J.; Knight, M. E.; Haesler, M. P.; Turner, G. F. (2010) Establishment and expansion of Lake Malawi rock fish populations after a dramatic Late Pleistocene lake level rise, Molecular Ecology, 19(1), 170-182, doi:10.1111/j.1365-294X.2009.04434.x, Institutional Repository
Hofmann, C. M.; O’Quin, K. E.; Marshall, N. J.; Cronin, T. W.; Seehausen, O.; Carleton, K. L. (2009) The eyes have it: regulatory and structural changes both underlie cichlid visual pigment diversity, PLoS Biology, 7(12), 1-13, doi:10.1371/journal.pbio.1000266, Institutional Repository
Keller, I.; Korner-Nievergelt, F.; Jenni, L. (2009) Within-winter movements: a common phenomenon in the Common Pochard Aythya ferina, Journal für Ornithologie, 150(2), 483-494, doi:10.1007/s10336-008-0367-x, Institutional Repository
Magalhaes, I. S.; Mwaiko, S.; Schneider, M. V.; Seehausen, O. (2009) Divergent selection and phenotypic plasticity during incipient speciation in Lake Victoria cichlid fish, Journal of Evolutionary Biology, 22(2), 260-274, doi:10.1111/j.1420-9101.2008.01637.x, Institutional Repository
Nosil, P.; Harmon, L. J.; Seehausen, O. (2009) Ecological explanations for (incomplete) speciation, Trends in Ecology and Evolution, 24(3), 145-156, doi:10.1016/j.tree.2008.10.011, Institutional Repository
Pierotti, M. E. R.; Martín-Fernández, J. A.; Seehausen, O. (2009) Mapping individual variation in male mating preference space: multiple choice in a color polymorphic cichlid fish, Evolution, International Journal of Organic Evolution, 63(9), 2372-2388, doi:10.1111/j.1558-5646.2009.00716.x, Institutional Repository
Schweizer, M.; Seehausen, O.; Güntert, M.; Hertwig, S. T. (2010) The evolutionary diversification of parrots supports a taxon pulse model with multiple trans-oceanic dispersal events and local radiations, Molecular Phylogenetics and Evolution, 54(3), 984-994, doi:10.1016/j.ympev.2009.08.021, Institutional Repository
Seehausen, O. (2009) Progressive levels of trait divergence along a ‘speciation transect’ in the Lake Victoria cichlid fish Pundamilia, In: Butlin, R. K.; Bridle, J. R.; Schluter, D. (Eds.), Speciation and Patterns of Diversity, 155-176, Institutional Repository
Seehausen, O. (2009) Ecology: Speciation affects ecosystems, Nature, 458(7242), 1122-1123, doi:10.1038/4581122a, Institutional Repository
Stelkens, R. B.; Schmid, C.; Selz, O.; Seehausen, O. (2009) Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish, BMC Evolutionary Biology, 9, 283 (13 pp.), doi:10.1186/1471-2148-9-283, Institutional Repository
Stelkens, R. B.; Young, K. A.; Seehausen, O. (2010) The accumulation of reproductive incompatibilities in African ciclid fish, Evolution, International Journal of Organic Evolution, 64(3), 617-633, doi:10.1111/j.1558-5646.2009.00849.x, Institutional Repository
Stelkens, R.; Seehausen, O. (2009) Genetic distance between species predicts novel trait expression in their hybrids, Evolution, International Journal of Organic Evolution, 63(4), 884-897, doi:10.1111/j.1558-5646.2008.00599.x, Institutional Repository
Stelkens, R. B.; Seehausen, O. (2009) Phenotypic divergence but not genetic distance predicts assortative mating among species of a cichlid fish radiation, Journal of Evolutionary Biology, 22(8), 1679-1694, doi:10.1111/j.1420-9101.2009.01777.x, Institutional Repository
Vonlanthen, P.; Roy, D.; Hudson, A. G.; Largiadèr, C. R.; Bittner, D.; Seehausen, O. (2009) Divergence along a steep ecological gradient in Lake whitefish (Coregonus sp.), Journal of Evolutionary Biology, 22(3), 498-514, doi:10.1111/j.1420-9101.2008.01670.x, Institutional Repository
Weber, C.; Schager, E.; Peter, A. (2009) Habitat diversity and fish assemblage structure in local river widenings: a case study on a swiss river, River Research and Applications, 25(6), 687-701, doi:10.1002/rra.1176, Institutional Repository
Woods, P. J.; Müller, R.; Seehausen, O. (2009) Intergenomic epistasis causes asynchronous hatch times in whitefish hybrids, but only when parental ecotypes differ, Journal of Evolutionary Biology, 22(11), 2305-2319, doi:10.1111/j.1420-9101.2009.01846.x, Institutional Repository
Zhu, L.; Wang, Q.; Tang, P.; Araki, H.; Tian, D. (2009) Genomewide association between insertions/deletions and the nucleotide diversity in bacteria, Molecular Biology and Evolution, 26(10), 2353-2361, doi:10.1093/molbev/msp144, Institutional Repository
Young, K. A.; Snoeks, J.; Seehausen, O. (2009) Morphological diversity and the roles of contingency, chance and determinism in African cichlid radiations, PLoS One, 4(3), 1-8, doi:10.1371/journal.pone.0004740, Institutional Repository

Dijkstra P., Hemelrijk C., Seehausen O., Groothuis T. (2009) Colour polymorphism and intrasexual competition in assemblages of cichlid fish. Behav Ecol 20(1), 138-144 doi:10.1093/beheco/arn125


Haesler MP, Lindeijer CM, Taborksy M (2009). Reproductive parasitism: male and female responses to conspecific and heterospecific intrusions at spawning in a mouthbrooding cichlid. J Fish Biol doi:10.1111/j.1095-8649.2009.02442.x


Maan M.E., Cummings M.E. (2009) Sexual dimorphism and directional sexual selection on aposematic signals in a poison frog. P Natl Acad Sci 106: 19072-19077


Peter A. (2009) A plea for the restoration of alpine rivers: Basic principles derived from “Rhone-Thur” case study. In: Alpine Waters, Editor U. Bundi. Springer-Verlag, Berlin


Seehausen O. (2009). Cichlid Fish. In Gillespie, R. and Clague, D. Encyclopedia of Islands. University of California Press 


Young KA, Genner MJ, Joyce DA, Haesler MP (2009) Hotshots, hot spots, and female preference: exploring lek formation models with a bower-building cichlid fish. Behav Ecol  20, 609-615

Publications 2008

peer reviewed journals

Araki, H.; Berejikian, B. A.; Ford, M. J.; Blouin, M. S. (2008) Fitness of hatchery-reared salmonids in the wild, Evolutionary Applications, 1(2), 342-355, doi:10.1111/j.1752-4571.2008.00026.x, Institutional Repository
Zhang, W.; Sun, X.; Yuan, H.; Araki, H.; Wang, J.; Tian, D. (2008) The pattern of insertion/deletion polymorphism in Arabidopsis thaliana, Molecular Genetics and Genomics, 280(4), 351-361, doi:10.1007/s00438-008-0370-1, Institutional Repository
Du, J.; Gu, T.; Tian, H.; Araki, H.; Yang, Y.-H.; Tian, D. (2008) Grouped nucleotide polymorphism: a major contributor to genetic variation in Arabidopsis, Gene, 426(1–2), 1-6, doi:10.1016/j.gene.2008.09.003, Institutional Repository
Tian, D.; Wang, Q.; Zhang, P.; Araki, H.; Yang, S.; Kreitman, M.; Nagylaki, T.; Hudson, R.; Bergelson, J.; Chen, J.-Q. (2008) Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes, Nature, 455(7175), 105-108, doi:10.1038/nature07175, Institutional Repository
Veltsos, P.; Keller, I.; Nichols, R. A. (2008) The inexorable spread of a newly arisen neo-Y chromosome, PLoS Genetics, 4(5), 1-9, doi:10.1371/journal.pgen.1000082, Institutional Repository
Wedekind, C.; Jacob, A.; Evanno, G.; Nusslé, S.; Müller, R. (2008) Viability of brown trout embryos positively linked to melanin-based but negatively to carotenoid-based colours of their fathers, Proceedings of the Royal Society B: Biological Sciences, 275(1644), 1737-1744, doi:10.1098/rspb.2008.0072, Institutional Repository
Rudolfsen, G.; Müller, R.; Urbach, D.; Wedekind, C. (2008) Predicting the mating system from phenotypic correlations between life-history and sperm quality traits in the Alpine whitefish Coregonus zugensis, Behavioral Ecology and Sociobiology, 62(4), 561-567, doi:10.1007/s00265-007-0480-5, Institutional Repository
Mouton, A. M.; Schneider, M.; Peter, A.; Holzer, G.; Müller, R.; Goethals, P. L. M.; De Pauw, N. (2008) Optimisation of a fuzzy physical habitat model for spawning European grayling (Thymallus thymallus L.) in the Aare river (Thun, Switzerland), Ecological Modelling, 215(1–3), 122-132, doi:10.1016/j.ecolmodel.2008.02.028, Institutional Repository
Burkhardt-Holm, P.; Segner, H.; Burki, R.; Peter, A.; Schubert, S.; Suter, M. J. -F.; Borsuk, M. E. (2008) Estrogenic endocrine disruption in Switzerland: assessment of fish exposure and effects, Chimia, 62(5), 376-382, doi:10.2533/chimia.2008.376, Institutional Repository
Peter, A.; Schager, E.; Weber, C. (2008) Fischökologische Anforderungen an den Wasserbau, In: Minor, H.-E. (Eds.), Neue Anforderungen an den Wasserbau, 811-822, Institutional Repository
Pierotti, M. E. R.; Knight, M. E.; Immler, S.; Barson, N. J.; Turner, G. F.; Seehausen, O. (2008) Individual variation in male mating preferences for female coloration in a polymorphic cichlid fish, Behavioral Ecology, 19(3), 483-488, doi:10.1093/beheco/arm154, Institutional Repository
Schubert, S.; Peter, A.; Burki, R.; Schönenberger, R.; Suter, M. J. -F.; Segner, H.; Burkhardt-Holm, P. (2008) Sensitivity of brown trout reproduction to long-term estrogenic exposure, Aquatic Toxicology, 90(1), 65-72, doi:10.1016/j.aquatox.2008.08.002, Institutional Repository
Dijkstra, P. D.; Seehausen, O.; Fraterman, R. E.; Groothuis, T. G. G. (2008) Learned aggression biases in males of Lake Victoria cichlid fish, Animal Behaviour, 76(3), 649-655, doi:10.1016/j.anbehav.2008.03.013, Institutional Repository
Maan, M. E.; Eshuis, B.; Haesler, M. P.; Schneider, M. V.; van Alphen, J. J. M.; Seehausen, O. (2008) Color polymorphism and predation in a Lake Victoria cichlid fish, Copeia, 2008(3), 621-629, doi:10.1643/CE-07-114, Institutional Repository
Maan, M. E.; van Rooijen, A. M. C.; van Alphen, J. J. M.; Seehausen, O. (2008) Parasite-mediated sexual selection and species divergence in Lake Victoria cichlid fish, Biological Journal of the Linnean Society, 94(1), 53-60, doi:10.1111/j.1095-8312.2008.00989.x, Institutional Repository
Seehausen, O.; Terai, Y.; Magalhaes, I. S.; Carleton, K. L.; Mrosso, H. D. J.; Miyagi, R.; van der Sluijs, I.; Schneider, M. V.; Maan, M. E.; Tachida, H.; Imai, H.; Okada, N. (2008) Speciation through sensory drive in cichlid fish, Nature, 455(7285), 620-626, doi:10.1038/nature07285, Institutional Repository
Stelkens, R. B.; Pierotti, M. E. R.; Joyce, D. A.; Smith, A. M.; van der Sluijs, I.; Seehausen, O. (2008) Disruptive sexual selection on male nuptial coloration in an experimental hybrid population of cichlid fish, Philosophical Transactions of the Royal Society B: Biological Sciences, 363(1505), 2861-2870, doi:10.1098/rstb.2008.0049, Institutional Repository
van der Sluijs, I.; Van Dooren, T. J. M.; Hofker, K. D.; van Alphen, J. J. M.; Stelkens, R. B.; Seehausen, O. (2008) Female mating preference functions predict sexual selection against hybrids between sibling species of cichlid fish, Philosophical Transactions of the Royal Society B: Biological Sciences, 363(1505), 2871-2877, doi:10.1098/rstb.2008.0045, Institutional Repository
Neuenschwander, S.; Largiadèr, C. R.; Ray, N.; Currat, M.; Vonlanthen, P.; Excoffier, L. (2008) Colonization history of the Swiss Rhine basin by the bullhead (Cottus gobio): inference under a Bayesian spatially explicit framework, Molecular Ecology, 17(3), 757-772, doi:10.1111/j.1365-294X.2007.03621.x, Institutional Repository
van der Sluijs, I.; Van Dooren, T. J. M.; Seehausen, O.; van Alphen, J. J. M. (2008) A test of fitness consequences of hybridization in sibling species of Lake Victoria cichlid fish, Journal of Evolutionary Biology, 21(2), 480-491, doi:10.1111/j.1420-9101.2007.01495.x, Institutional Repository

Araki, H. (2008) Hatchery Stocking for Restoring Wild Populations: A Genetic Evaluation of the Reproductive Success of Hatchery Fish vs. Wild Fish. In Fisheries for Global Welfare and Environment. pp. 153-167. Tsukamoto, Kawamura, Takeuchi, Beard, and Kaiser Eds., TERRAPUB, Tokyo, Japan


Keller I., Veltsos P., Nichols R.A. (2008) The Frequency of rDNA variants within individuals provides evidence of population history and gene flow across a grasshopper hybrid zone. Evolution 62 (4), 833–844  doi:10.1111/j.1558-5646.2008.00320.x


Roy, D., Bühler, E., Lucek, K., Seehausen, O., (2008) Is there evidence of resource-based adaptive divergence in recently invading stickleback (Gasterosteus aculeatus) populations from Swiss peri-alpine environments? In Morphometrics for nonmorphometricians Ed. Ashraf M. T. Elewa (Springer Verlag)

Publications 2007

peer reviewed journals

Bezault, E.; Clota, F.; Derivaz, M.; Chevassus, B.; Baroiller, J.-F. (2007) Sex determination and temperature-induced sex differentiation in three natural populations of Nile tilapia (Oreochromis niloticus) adapted to extreme temperature conditions, Aquaculture, 272(Suppl. 1), S3-S16, doi:10.1016/j.aquaculture.2007.07.227, Institutional Repository
Hölker, F.; Dörner, H.; Schulze, T.; Haertel-Borer, S. S.; Peacor, S. D.; Mehner, T. (2007) Species-specific responses of planktivorous fish to the introduction of a new piscivore: implications for prey fitness, Freshwater Biology, 52(9), 1793-1806, doi:10.1111/j.1365-2427.2007.01810.x, Institutional Repository
Schleuter, D.; Haertel-Borer, S.; Fischer, P.; Eckmann, R. (2007) Respiration rates of Eurasian perch Perca fluviatilis and ruffe: lower energy costs in groups, Transactions of the American Fisheries Society, 136(1), 43-55, doi:10.1577/T06-123.1, Institutional Repository
Allen, D. M.; Haertel-Borer, S. S.; Milan, B. J.; Bushek, D.; Dame, R. F. (2007) Geomorphological determinants of nekton use of intertidal salt marsh creeks, Marine Ecology Progress Series, 329, 57-71, doi:10.3354/meps329057, Institutional Repository
Hudson, A. G.; Vonlanthen, P.; Müller, R.; Seehausen, O. (2007) Review: the geography of speciation and adaptive radiation in coregonines, In: Jankun, M.; Brzuzan, P.; Hliwa, P.; Luczynski, M. (Eds.), Biology and management of coregonid fishes - 2005. Proceedings of the ninth international symposium on the biology and management of coregonid fishes held in Olsztyn, Poland, 111-146, Institutional Repository
Jacob, A.; Nusslé, S.; Britschgi, A.; Evanno, G.; Müller, R.; Wedekind, C. (2007) Male dominance linked to size and age, but not to 'good genes' in brown trout (Salmo trutta), BMC Evolutionary Biology, 7, 207 (9 pp.), doi:10.1186/1471-2148-7-207, Institutional Repository
Eckmann, R.; Gerdeaux, D.; Müller, R.; Rösch, R. (2007) Re-oligotrophication and whitefish fisheries management – a workshop summary, In: Jankun, M.; Brzuzan, P.; Hliwa, P.; Luczynski, M. (Eds.), Biology and management of coregonid fishes - 2005. Proceedings of the ninth international symposium on the biology and management of coregonid fishes held in Olsztyn, Poland, 353-360, Institutional Repository
Rudolfsen, G.; Müller, R.; Urbach, D.; Wedekind, C. (2008) Predicting the mating system from phenotypic correlations between life-history and sperm quality traits in the Alpine whitefish Coregonus zugensis, Behavioral Ecology and Sociobiology, 62(4), 561-567, doi:10.1007/s00265-007-0480-5, Institutional Repository
Wedekind, C.; Rudolfsen, G.; Jacob, A.; Urbach, D.; Müller, R. (2007) The genetic consequences of hatchery-induced sperm competition in a salmonid, Biological Conservation, 137(2), 180-188, doi:10.1016/j.biocon.2007.01.025, Institutional Repository
Wedekind, C.; Evanno, G.; Urbach, D.; Jacob, A.; Müller, R. (2007) 'Good-genes' and 'compatible-genes' effects in an Alpine whitefish and the information content of breeding tubercles over the course of the spawning season, Genetica, 132(2), 199-208, doi:10.1007/s10709-007-9164-3, Institutional Repository
Müller, R. (2007) The re-discovery of the vanished "Edelfisch" Coregonus nobilis Haack, 1882, in Lake Lucerne, Switzerland, In: Jankun, M.; Brzuzan, P.; Hliwa, P.; Luczynski, M. (Eds.), Biology and management of coregonid fishes - 2005. Proceedings of the ninth international symposium on the biology and management of coregonid fishes held in Olsztyn, Poland, 419-430, Institutional Repository
Müller, R.; Breitenstein, M.; Mbuenemo Bia, M.; Rellstab, C.; Kirchhofer, A. (2007) Bottom-up control of whitefish populations in ultra-oligotrophic Lake Brienz, Aquatic Sciences, 69(2), 271-288, doi:10.1007/s00027-007-0874-5, Institutional Repository
Roy, D.; Docker, M. F.; Haffner, G. D.; Heath, D. D. (2007) Body shape vs. colour associated initial divergence in the Telmatherina radiation in Lake Matano, Sulawesi, Indonesia, Journal of Evolutionary Biology, 20(3), 1126-1137, doi:10.1111/j.1420-9101.2006.01289.x, Institutional Repository
Finger, D.; Bossard, P.; Schmid, M.; Jaun, L.; Müller, B.; Steiner, D.; Schäffer, E.; Zeh, M.; Wüest, A. (2007) Effects of alpine hydropower operations on primary production in a downstream lake, Aquatic Sciences, 69(2), 240-256, doi:10.1007/s00027-007-0873-6, Institutional Repository
Schager, E.; Peter, A.; Burkhardt-Holm, P. (2007) Status of young-of-the-year brown trout (Salmo trutta fario) in Swiss streams: factors influencing YOY trout recruitment, Aquatic Sciences, 69(1), 41-50, doi:10.1007/s00027-007-0845-x, Institutional Repository
Dijkstra, P. D.; Seehausen, O.; Groothuis, T. G. G. (2008) Intrasexual competition among females and the stabilization of a conspicuous colour polymorphism in a Lake Victoria cichlid fish, Proceedings of the Royal Society B: Biological Sciences, 275(1634), 519-526, doi:10.1098/rspb.2007.1441, Institutional Repository
Seehausen, O.; Takimoto, G.; Roy, D.; Jokela, J. (2008) Speciation reversal and biodiversity dynamics with hybridization in changing environments, Molecular Ecology, 17(1), 30-44, doi:10.1111/j.1365-294X.2007.03529.x, Institutional Repository
Kawata, M.; Shoji, A.; Kawamura, S.; Seehausen, O. (2007) A genetically explicit model of speciation by sensory drive within a continuous population in aquatic environments, BMC Evolutionary Biology, 7, 99 (22 pp.), doi:10.1186/1471-2148-7-99, Institutional Repository
Witte, F.; Wanink, J. H.; Kishe-Machumu, M.; Mkumbo, O. C.; Goudswaard, P. C.; Seehausen, O. (2007) Differential decline and recovery of haplochromine trophic groups in the Mwanza Gulf of Lake Victoria, Aquatic Ecosystem Health and Management, 10(4), 416-433, doi:10.1080/14634980701709410, Institutional Repository
Genner, M. J.; Seehausen, O.; Lunt, D. H.; Joyce, D. A.; Shaw, P. W.; Carvalho, G. R.; Turner, G. F. (2007) Age of cichlids: new dates for ancient lake fish radiations, Molecular Biology and Evolution, 24(5), 1269-1282, doi:10.1093/molbev/msm050, Institutional Repository
van der Sluijs, I.; van Alphen, J. J. M.; Seehausen, O. (2008) Preference polymorphism for coloration but no speciation in a population of Lake Victoria cichlids, Behavioral Ecology, 19(1), 177-183, doi:10.1093/beheco/arm120, Institutional Repository
Vonlanthen, P.; Excoffier, L.; Bittner, D.; Persat, H.; Neuenschwander, S.; Largiadèr, C. R. (2007) Genetic analysis of potential postglacial watershed crossings in Central Europe by the bullhead (Cottus gobio L.), Molecular Ecology, 16(21), 4572-4584, doi:10.1111/j.1365-294X.2007.03531.x, Institutional Repository
Zimmerli, S.; Bernet, D.; Burkhardt-Holm, P.; Schmidt-Posthaus, H.; Vonlanthen, P.; Wahli, T.; Segner, H. (2007) Assessment of fish health status in four Swiss rivers showing a decline of brown trout catches, Aquatic Sciences, 69(1), 11-25, doi:10.1007/s00027-006-0844-3, Institutional Repository
Vuilleumier, S.; Lande, R.; van Alphen, J. J. M.; Seehausen, O. (2007) Invasion and fixation of sex-reversal genes, Journal of Evolutionary Biology, 20(3), 913-920, doi:10.1111/j.1420-9101.2007.01311.x, Institutional Repository
Weber, C.; Peter, A.; Zanini, F. (2007) Spatio-temporal analysis of fish and their habitat: a case study on a highly degraded Swiss river system prior to extensive rehabilitation, Aquatic Sciences, 69(1), 162-172, doi:10.1007/s00027-007-0912-3, Institutional Repository
Fette, M.; Weber, C.; Peter, A.; Wehrli, B. (2007) Hydropower production and river rehabilitation: a case study on an alpine river, Environmental Modeling and Assessment, 12(4), 257-267, doi:10.1007/s10666-006-9061-7, Institutional Repository
Woods, P. J. (2007) Habitat-dependent geographical variation in ontogenetic allometry of the shiner perch Cymatogaster aggregata Gibbons (Teleostei: Embiotocidae), Journal of Evolutionary Biology, 20(5), 1783-1798, doi:10.1111/j.1420-9101.2007.01386.x, Institutional Repository
Woolsey, S.; Capelli, F.; Gonser, T.; Hoehn, E.; Hostmann, M.; Junker, B.; Paetzold, A.; Roulier, C.; Schweizer, S.; Tiegs, S. D.; Tockner, K.; Weber, C.; Peter, A. (2007) A strategy to assess river restoration success, Freshwater Biology, 52(4), 752-769, doi:10.1111/j.1365-2427.2007.01740.x, Institutional Repository

Roy D., Paterson G., Hamilton PB., Heath DD., Haffner GD (2007) Resource based adaptive divergence of Telmatherina in Lake Matano IndonesiaMol Ecol 16 (1), 35 - 48 doi: 10.1111/j.1365-294X.2006.03106.x


Seehausen O. (2007) Chance, historical contingency and ecological determinism interact in adaptive radiation. Heredity 99 (4), 361 - 363 doi:10.1038/sj.hdy.6801047

 

Publications 2006

peer reviewed journals

Borsuk, M. E.; Reichert, P.; Peter, A.; Schager, E.; Burkhardt-Holm, P. (2006) Assessing the decline of brown trout (Salmo trutta) in Swiss rivers using a Bayesian probability network, Ecological Modelling, 192(1-2), 224-244, doi:10.1016/j.ecolmodel.2005.07.006, Institutional Repository
Pierotti, M. E. R.; Seehausen, O. (2007) Male mating preferences pre-date the origin of a female trait polymorphism in an incipient species complex of Lake Victoria cichlids, Journal of Evolutionary Biology, 20(1), 240-248, doi:10.1111/j.1420-9101.2006.01206.x, Institutional Repository
Terai, Y.; Seehausen, O.; Sasaki, T.; Takahashi, K.; Mizoiri, S.; Sugawara, T.; Sato, T.; Watanabe, M.; Konijnendijk, N.; Mrosso, H. D. J.; Tachida, H.; Imai, H.; Shichida, Y.; Okada, N. (2006) Divergent selection on opsins drives incipient speciation in Lake Victoria cichlids, PLoS Biology, 4(12), 2244-2251, doi:10.1371/journal.pbio.0040433, Institutional Repository
Maan, M. E.; van der Spoel, M.; Quesada Jimenez, P.; van Alphen, J. J. M.; Seehausen, O. (2006) Fitness correlates of male coloration in a Lake Victoria cichlid fish, Behavioral Ecology, 17(5), 691-699, doi:10.1093/beheco/ark020, Institutional Repository
Maan, M. E.; Hofker, K. D.; van Alphen, J. J. M.; Seehausen, O. (2006) Sensory drive in cichlid speciation, American Naturalist, 167(6), 947-954, doi:10.1086/503532, Institutional Repository
Maan, M. E.; Haesler, M. P.; Seehausen, O.; van Alphen, J. J. M. (2006) Heritability and heterochrony of polychromatism in a Lake Victoria cichlid fish: stepping stones for speciation?, Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution, 306(2), 168-176, doi:10.1002/jez.b.21083, Institutional Repository
Dijkstra, P. D.; Seehausen, O.; Gricar, B. L. A.; Maan, M. E.; Groothuis, T. G. G. (2006) Can male-male competition stabilize speciation? A test in Lake Victoria haplochromine cichlid fish, Behavioral Ecology and Sociobiology, 59(5), 704-713, doi:10.1007/s00265-005-0100-1, Institutional Repository
Seehausen, O. (2006) African cichlid fish: a model system in adaptive radiation research, Proceedings of the Royal Society B: Biological Sciences, 273(1597), 1987-1998, doi:10.1098/rspb.2006.3539, Institutional Repository
Seehausen, O. (2006) Conservation: losing biodiversity by reverse speciation, Current Biology, 16(9), R334-R337, doi:10.1016/j.cub.2006.03.080, Institutional Repository
Weber, C. (2006) River rehabilitation and fish: the challenge of initiating ecological recovery, 139 p, doi:10.3929/ethz-a-005359629, Institutional Repository
Blanckenhorn, W. U.; Stillwell, R. C.; Young, K. A.; Fox, C. W.; Ashton, K. G. (2006) When Rensch meets Bergmann: does sexual size dimorphism change systematically with latitude?, Evolution, International Journal of Organic Evolution, 60(10), 2004-2011, doi:10.1554/06-110.1, Institutional Repository

Schulze T., Baade U., Dörner H., Eckmann R., Haertel-Borer S.S., Hölker F. Mehner T.  (2006) Interactions of residential piscivores with an introduced new predator type in a mesotrophic lake. Can J Fish Aquat Sci 63 (10), 2202 - 2212 doi:10.1139/F06-099


Rohdea S., Hostmann M., Peter A., Ewald K.C. (2006) Room for rivers: An integrative search strategy for floodplain restoration. Landscape and Urban Planning 78, (1-2), 50 - 70 doi:10.1016/j.landurbplan.2005.05.006


Roy D., Kelly DW., Fransen CHJM., Heath DD., Haffner GD. (2006) Evidence of smallscale vicariance in Caridina lanceolata (Decapoda: Atyidae) in the Malili Lakes, Sulawesi Island, Indonesia. Evol  Ecol Research 8: 1087-1099


Heath DD., Haffner GD., Roy D., Walter R.  (2006) Adaptive radiation and population genetics of the Telmathrinidae in Lake Matano. The Ecology & Limnology of the Malili Lakes p138- LIPI press, Bogor.


Dijkstra P.D., Seehausen O., Gricar B.L.A., Maan M.E., Groothuis T.G.G. (2006) Can male-male competition stabilize speciation? a test in Lake Victoria haplochromine cichlid fish. Behav Ecol Sociobio 59 (5), 704 - 713 doi:10.1007/s00265-005-0100-1


Schliewen U.K., Kocher T.D., McKaye,K.R., Seehausen O., Tautz D. (2006) No evidence for sympatric speciation. Nature 444 (7120), E12 - E13 doi:10.1038/nature05419

 


Vuilleumier S. (2006) Possingham, H.P. Does colonisation asymmetry matter in metapopulations? P Roy Soc Lond B 273(1594):1637-1642   


Vuilleumier, S., Wilcox , C., Cairns, B., Possingham, H.P. (2006) How patch configuration affects the impact of disturbances on metapopulation persistence. Theoretical Population Biology 72 (1), 77 - 85


Vuilleumier, S., P. Fontanillas. (2006) Landscape structure affects dispersal in the greater white-toothed shrew: inference between genetic and simulated ecological distances. Ecological Modelling 201 (3-4), 369-376


Vuilleumier, S., Metzger, R. (2006) Animal dispersal modelling: handling landscape features and related animal choices. Ecological Modelling 190(1-2):159-170 doi:10.1016/j.ecolmodel.2005.04.017


Vuilleumier, S., Perrin , N. (2006) Effects of cognitives abilities on metapopulation connectivity. Oikos 113(1), 139-147 

 

Publications 2005

peer reviewed journals

Joyce, D. A.; Lunt, D. H.; Bills, R.; Turner, G. F.; Katongo, C.; Duftner, N.; Sturmbauer, C.; Seehausen, O. (2005) An extant cichlid fish radiation emerged in an extinct Pleistocene lake, Nature, 435(7038), 90-95, doi:10.1038/nature03489, Institutional Repository
Wedekind, C.; Müller, R. (2005) Risk-induced early hatching in salmonids, Ecology, 86(9), 2525-2529, doi:10.1890/04-1738, Institutional Repository
Dijkstra, P. D.; Seehausen, O.; Groothuis, T. G. G. (2005) Direct male-male competition can facilitate invasion of new colour types in Lake Victoria cichlids, Behavioral Ecology and Sociobiology, 58(2), 136-143, doi:10.1007/s00265-005-0919-5, Institutional Repository
Seehausen, O. (2005) The cichlid fish radiations of East Africa: a model for understanding origin and loss of biodiversity, In: Thieme, M. L.; Abell, R.; Burgess, N.; World Wildlife Fund; Lehner, B.; Dinerstein, E.; Olson, D.; Teugels, G.; Kamdem-Toham, A.; Stiassny, M. L. J. S.; Skelton, P. (Eds.), Freshwat, 48-51, Institutional Repository
Spady, T. C.; Seehausen, O.; Loew, E. R.; Jordan, R. C.; Kocher, T. D.; Carleton, K. L. (2005) Adaptive molecular evolution in the opsin genes of rapidly speciating cichlid species, Molecular Biology and Evolution, 22(6), 1412-1422, doi:10.1093/molbev/msi137, Institutional Repository
Young, K. A. (2005) Life-history variation and allometry for sexual size dimorphism in Pacific salmon and trout, Proceedings of the Royal Society B: Biological Sciences, 272(1559), 167-172, doi:10.1098/rspb.2004.2931, Institutional Repository

Haertel-Borer S., Zak D., Eckmann R., Baade U., Hölker F. (2005) Population density of the crayfish, Orconectes limosus, in relation to fish and macroinvertebrate densities in a small mesotrophic lake - implications for the lake's food web. 523-533 doi:10.1002/iroh.200510819 


Haesler M. Seehausen O. (2005) The inheritance of female mating preference in a sympatric sibling species pair of Lake Victoria cichlids: implications for speciation. Proc. R. Soc. B 272 (1560), 237–245 doi:10.1098/rspb.2004.2946


Carleton K.L., Parry J.W.L., Bowmaker J.K., Hunt D.M., Seehausen O. (2005) Color vision and speciation in Lake Victoria cichlids of the genus Pundamilia. Mol Ecol 14 (14), 4341 - 4353 doi:10.1111/j.1365-294X.2005.02735.x

Publications 2004

peer reviewed journals

Wedekind, C.; Müller, R. (2004) The experimental rearing of large salmonid eggs in Petri dishes, Functional Ecology, 18(1), 138-140, doi:10.1111/j.1365-2435.2004.00822.x, Institutional Repository
Wedekind, C.; Walker, M.; Portmann, J.; Cenni, B.; Müller, R.; Binz, T. (2004) MHC-linked susceptibility to a bacterial infection, but no MHC-linked cryptic female choice in whitefish, Journal of Evolutionary Biology, 17(1), 11-18, doi:10.1046/j.1420-9101.2004.00669.x, Institutional Repository
Müller, R.; Stadelmann, P. (2004) Fish habitat requirements as the basis for rehabilitation of eutrophic lakes by oxygenation, Fisheries Management and Ecology, 11(3-4), 251-260, doi:10.1111/j.1365-2400.2004.00393.x, Institutional Repository
Rellstab, C.; Bürgi, H. R.; Müller, R. (2004) Population regulation in coregonids: the significance of zooplankton concentration for larval mortality, Annales Zoologici Fennici, 41(1), 281-290, Institutional Repository
Maan, M. E.; Seehausen, O.; Söderberg, L.; Johnson, L.; Ripmeester, E. A. P.; Mrosso, H. D. J.; Taylor, M. I.; van Dooren, T. J. M.; van Alphen, J. J. M. (2004) Intraspecific sexual selection on a speciation trait, male coloration, in the Lake Victoria cichlid Pundamilia nyererei, Proceedings of the Royal Society B: Biological Sciences, 271(1556), 2445-2452, doi:10.1098/rspb.2004.2911, Institutional Repository
Genner, M. J.; Seehausen, O.; Cleary, D. F. R.; Knight, M. E.; Michel, E.; Turner, G. F. (2004) How does the taxonomic status of allopatric populations influence species richness within African cichlid fish assemblages?, Journal of Biogeography, 31(1), 93-102, doi:10.1046/j.0305-0270.2003.00986.x, Institutional Repository
Seehausen, O. (2004) Hybridization and adaptive radiation, Trends in Ecology and Evolution, 19(4), 198-207, doi:10.1016/j.tree.2004.01.003, Institutional Repository
Seehausen, O.; Schluter, D. (2004) Male-male competition and nuptial-colour displacement as a diversifying force in Lake Victoria cichlid fishes, Proceedings of the Royal Society B: Biological Sciences, 271(1546), 1345-1353, doi:10.1098/rspb.2004.2737, Institutional Repository

Joyce, D.A, Pullin, A.S. (2004) Using genetics to inform reintroduction strategies for the chequered skipper. Journal of Insect Conservation 69-74


Haertel-Borer S.S., Allen, D.M. & Dame, R.F. (2004) Fishes and shrimps are significant sources of dissolved inorganic nutrients in intertidal salt marsh creeks. Journal of Experimental Marine Biology and Ecology 79-99 doi:10.1016/j.jembe.2004.05.002


Hölker, F. Haertel, S.S. (2004) Application of a bioenergetics model to roach. Journal of Applied Ichthyology 548-550


Mrosso H.D.J., Msuku B.S., Seehausen O. (2004) Relationship between water transparency and species richness of surviving haplochromines in selected habitats of Mwanza Gulf - Lake Victoria. Tanzania Journal of Science 30 (1) 101-108  


Seehausen, O. (2004) Hybridization, rare alleles and adaptive radiation. Trends Ecol. Evol. 19, 405 - 406


Young K. (2004) Asymmetric competition, habitat selection, and niche overlap in juvenile salmonids. Ecology 134-149


Young K.  (2004) Toward Evolutionary Management, Lessons from Salmonids. Evolution Illuminated: Salmon and Their Relatives, pp 358-376


Day T., Young K. (2004) Competitve and Facilitative Evolutionary Diversification. Bioscience 101-109


Fischer A., Young K., DeLellis R. (2004) Incorporating Pathologists' Criteria of Malignancy Into the Evolutionary Model for Cancer Development. Journal of Cellular  Biochemistry 28-36 doi:10.1002/jcb.20105

 

Publications 2003

peer reviewed journals

Allender, C.J., Seehausen, O., Knight, M.E., Turner, G.F. & Maclean, N. (2003) Divergent selection during speciation of Lake Malawi cichlid fishes inferred from parallel radiations in nuptial coloration. Proc. Natl. Acad. Sci. USA 14074-14079


Alphen van, J.J.M., Seehausen, O., Galis, F. (2003) Speciation and species richness in African haplochromine cichlids. In: Dieckmann, U., Metz, J.A.J., Doebeli, M., Tautz, D. (eds) Adaptive Speciation. Cambridge University Press


Balirwa, J., Chapman, C.A., Chapman, L.J., Geheb, K., Lowe-McConnell, R., Seehausen, O., Wanink, J., Welcomme, R., Witte, F. (2003) Biodiversity and Fisheries sustainability in the Lake Victoria basin: an unexpected marriage. Bioscience 703-715


Chapman, L.J., Chapman, C.A., Schofield, P.J., Olowo, J.P., Kaufman, L.S., Seehausen, O., Ogutu-Ohwayo, R. Fish (2003) Faunal Resurgence in Lake Nabugabo, East Africa. Conservation Biology 500-511


Joyce, D.A., Pullin, A.S. (2003) Conservation implications of the distribution of genetic diversity at different scales - a case study using the marsh fritillary butterfly. Biological Conservation 453-461 doi:10.1016/S0006-3207(03)00087-9


Seehausen, O., Koetsier, E., Schneider, M.V., Chapman, L.J., Chapman, C.A., Knight, M.E., Turner, G.F., van Alphen, J.J.M., Bill, R. (2003) Nuclear markers reveal unexpected genetic variation and a Congolese/Nilotic origin of the Lake Victoria cichlid species flock. Proc. R. Soc. Lond. B 129-137 doi:10.1098/rspb.2002.2153


Seehausen, O., van Alphen, J.J.M, Witte, F. Implications of eutrophication for fish vision, behavioral ecology and species coexistence. In: In Chrisman, T. Chapman, L., Chapman, C. (eds) (2003) Aquatic Conservation and Management in Africa. University of Florida Press 266-287 


Young, K. (2003) Evolution of fighting behavior under asymmetric competition: an experimental test with juvenile salmonids. Behavioral Ecology 127-134


Evans JP, Pierotti M, Pilastro A. (2003) Male mating behavior and ejaculate expenditure under sperm competition risk in the eastern mosquitofish. Behavioral Ecology Vol. 14 No. 2: 268–273

Publications 2002

peer reviewed journals

  • Enz, C.A., Müller, R., Mbwenemo Bia, M., Heeb, J. A population dynamics model for evaluating mortality factors in whitefish (coregonus suidteri) larvae in Lake Hallwil. Arch. Hydrobiol. Spec. Issues Advanc. Limnol. 343-358  
  • Haertel, S.S., Baade, U. & Eckmann, R. No general percid dominance at mesotrophic lake conditions: Insights from the quantification of predator-prey interactions. Limnologica 1-13
  • Haertel, S.S. & Eckmann. R. Diel diet shifts of roach and its implications for the estimation of daily rations. Journal of Fish Biology 876.892  doi:10.1006/jfbi.2002.1890
  • Hölker, F., Haertel, S.S., Steiner, S. & Mehner, T. Effects of piscivore-mediated habitat use on growth, diet and zooplankton consumption of roach - An individual-based approach. Freshwater biology 2345-2358
  • Müller, R., Meng, H.J, Enz, C., Mbwenemo Bia, M., Schaeffer, E. Forecasting year-class strength and yield of Lake Hallwil whitefish in an eutrophic lake. Arch. Hydrobiol. Spec. Issues Advanc. Limnol. 615-625  
  • Seehausen, O. Patterns in fish radition are compatible with Pleistocene desiccation of Lake Victoria and 14600 year history for its cichlid species flock. Proc. R. Soc. Lond. B 491-497 doi:10.1098/rspb.2001.1906
  • Taylor, M.I., Meardon, F., Turner, G., Seehausen, O., Mrosso, H.D.J., Rico, C. Characterization of tetranucleotide microsatellite loci in a Lake Victorian, haplochromine cichlid fish: a Pundamilia pundamilia x Pundamilia nyererei hybrid. Mol. Ecol. Notes 443-445 doi:10.1046/j.1471-8278 .2002.00272.x
  • Vuilleumier, S., Prélaz-Droux R.: Map of ecological networks for landscape planning. Landscape and Urban Planning 157-170

Publications 2001

peer reviewed journals

  • Alphen, J.J.M. van, Seehausen, O. Sexual selection, reproductive isolation and the genic view of speciation. J. Evol. Biol. 874-875
  • Enz, E.A., Schäffer, E., Müller, R. Importance of Diet Type, Food Particle Size and Tank Circulation for Culture of Lake Hallwil Whitefish Larvae. North American Journal of Aquaculture 321-327
  • Enz, C.A., Bürgi, H.R., Stössel, F., Müller, R. Food preference of adult whitefish in eutrophic Lake Hallwil (Switzerland), and the question of cannibalism. Arch. Hydrobiol. 81-98
  • Enz, C.A., Heller, C., Müller, R., Bürgi, H.R. Investigations on fecundity of Bythotrephes longimanus in Lake Lucerne (Switzerland) and on Niche Segregation of Leptodora kindti and Bythotrephes longimanus in Swiss lakes. Hydrobiologia 143-151  
  • Gavin, D., McLachlan, J., Brubaker, L., Young, K. Postglacial history of subalpine forests. Olympic Peninsula. Washington, USA. The Holocene 177-188
  • Lande, R., Seehausen, O., van Alphen, J.J.M. Rapid sympatric speciation by sex reversal and sexual selection in cichlid fish. Genetica 435-443
  • Turner, G.F., Seehausen, O., Knight, M.E., Allender, C.J., Robinson, R.L. How many species of cichlid fishes are there in African lakes? Molecular Ecology 793-806
  • Wedekind, C., Müller, R., Spicher, H. Potential genetic benefits of mate selection in whitefish. J. Evol. Biol. 980-986
  • Wedekind, C., Müller, R., Steffen, A., Eggler ,R. A low-cost method of rearing multiple batches of fish. Acquaculture 31-37
  • Young, K. Defining Units of Conservation for Intraspecific Biodiversity: Reply to Dimmick et al. Conservation Biology 784-787
  • Young, K. Habitat diversity and species diversity: testing the competition hypothesis with juvenile salmonids. OIKOS 87-93
  • Young, K. Riparian meta-analysis. North American Journal of Fisheries Management

 

Publications 2000

peer reviewed journals

  • Binz T., Largiader C., Müller R., Wedekind C. Sequence diversity of Mhc genes in lake whitefish. Journal of Fish Biology 58, 359–373 doi:10.1006/jfbi.2000.1449
  • Enz C.A., Schäffer E., Müller R. Growth and survival of Lake Hallwil whitefish (Coregonus sp.) larvae reared on dry and live food. Arch. Hydrobiol. 499-516  
  • Müller, R. & Naeve, H., eds. Water for Sustainable Inland Fisheries and Aquaculture. An International Symposium organised by European Inland Fisheries Advisory Commission, FAO, Rome. Special Issue of Fisheries Management and Ecology 195 p
  • Seehausen, O. Explosive speciation rates and unusual species richness in haplochromine cichlids effects of sexual selection. Advances in Ecological Research 237-274
  • Seehausen, O., van Alphen, J.J.M. Reply: Inferring modes of speciation from distribution patterns. Ecology Letters 169-171
  • Witte, F., Msuku, B.S., Wanink, J.H., Seehausen, O., Katunzi, E.F.B. Goudswaard, P.C., Goldschmidt, T. Recovery of cichlid species in southern Lake Victoria (Tanzania).  Reviews in Fish Biology and Fisheries 10: 233–241
  • Young, K. Riparian Zone Management in the Pacific Northwest: Who's Cutting What? Environmental Management 131-144

 

Publications 1999-1997

peer reviewed journals

1999
  • Bouton, N., Witte, F., van Alphen, J.J.M., Schenk, A., Seehausen, O. Local adaptations in populations of rock-dwelling haplochromines (Pisces: Cichlidae) from southern Lake Victoria. Proc. R. Soc. Lond. B 266, 355-360
  • Frutiger, A., Borner, S., Büsser, T., Eggen, R., Müller, R., Müller, S. & Wasmer, H.R. How to control unwanted populations of Procambarus clarkii in Central Europe? Freshwater Crayfish 12, 714-726
  • Seehausen, O., van Alphen, J.J.M., Lande, R. Colour polymorphism and sex ratio distortion in a cichlid fish as an incipient stage in sympatric speciation by sexual selection.  Ecology Letters 2:367-378
  • Seehausen, O., van Alphen, J.J.M. Can sympatric speciation by disruptive sexual selection explain rapid evolution of cichlid diversity in Lake Victoria? Ecology Letters 2: 262-271
  • Seehausen, O., van Alphen, J.J.M., Witte, F. Can ancient colour polymorphisms explain why some cichlid lineages speciate rapidly under disruptive sexual selection? Belgian Journal of Zoology 43-60 
  • Seehausen, O., Mayhew, P.J., van Alphen, J.J.M. Evolution of colour patterns in East African cichlid fish. J.Evol.Biol. 12, 514-534
  • Seehausen, O. A reconsideration of the ecological composition of the cichlid species flock in Lake Victoria before and after the Nile perch boom. Fish and Fisheries of Lakes and Reservoirs in Southeast Asia and Africa 281-293
  • Witte,F, Goudswaard, PC, Katunzi, EFB, Mkumbo, OC, Seehausen, O, Wanink, JH. Lake Victoria's ecological changes and their relationships with the riparian societies. In; H. Kawanabe, G.W. Coulter & A.C. Roosevelt (eds). Ancient Lakes: Their Cultural and Biological Diversity, Kenobi, Ghent: 189-202
  • Young, K. Managing the decline of Pacific salmon: metapopulation theory and artificial recolonization as ecological mitigation. Can. J. Fish. Aquat. Sci. 56:1700-1706
  • Young, K. Environmental Correlates of Male Life History Variation among Coho Salmon Populations from Two Oregon Coastal Basins. Transactions of the American Fisherires Society 128:1-16
  • Young, K. Status of Resident Coastal Cutthroat Trout and Their Habitat Twenty-Five Years after Riparian Logging. North American Journal of Fisheries Management 19:901-911
1998
  • Mookerji, N., Heller, C., Meng, H.J., Bürgi, H.R. & Müller, R. Diel and seasonal patterns of food intake and prey selection by Coregonus sp. in re-oligotrophicated Lake Lucerne, Switzerland. J. Fish Biol. 443-457
  • Müller, R., Mbwenemo Bia, M. Adaptive management of whitefish stocks in lakes undergoing re-oligotrophication: The Lake Lucerne example.  Arch. Hydrobiol. Spec. Issues Advanc. Limnol. 391-399 
  • Seehausen, O., van Alphen, J.J.M. The effect of male coloration on female mate choice in closely related Lake Victoria cichlids (Haplochromis nyererei complex) Behavioral Ecology and Sociobiology 1-8
  • Seehausen, O., Witte, F., van Alphen, J.J.M., Bouton, N. Direct mate choice maintains diversity among sympatric cichlids in Lake Victoria. Journal of Fish Biology. 37-55
  • Seehausen, O., Bouton, N. The community of rock dwelling cichlids in Lake Victoria. Bonner Zoologische Beiträge
  • Seehausen, O., Lippitsch, E., Bouton, N., Zwennes, H. Mbipi, the rock-dwelling cichlids of Lake Victoria: description of three new genera and fifteen new species (Teleostei) Ichthyological Exploration of Freshwaters
1997
  •  Bouton, N., Seehausen, O., van Alphen, J.J.M. Resource partitioning among rock dwelling haplochromines (Pisces: Cichlidae) from Lake Victoria  Ecology of Freshwater Fish 225-240
  • Seehausen, O., van Alphen, J.J.M, Witte, F.  Cichlid Fish Diversity Threatened by Eutrophication That Curbs Sexual Selection. Science 1808-1811 doi:10.1126/science.277.5333.1808
  • Seehausen, O., Witte, F., Katunzi, E.F., Smits, J., Bouton, N.  Patterns of the remnant cichlid fauna in southern Lake Victoria. Conservation Biology Volume 11, Number 4, 890-904 doi:10.1046/j.1523-1739.1997.95346.x
  • Seehausen, O., Bouton, N.  Microdistribution and fluctuations in niche overlap in a rocky shore cichlid community in Lake Victoria. Ecology of Freshwater Fish 161-173
  • Seehausen, O.  Distribution of and reproductive isolation among color morphs of a rock dwelling Lake Victoria cichlid. Ecology of  Freshwater Fish 59