Department Aquatic Ecology



Alberti, M., Palkovacs, E. P., Des Roches, S., De Meester, L., Brans, K. I., Govaert, L., … Verrelli, B. C. (2020). The complexity of urban eco-evolutionary dynamics. BioScience, 70(9), 772-793. doi:10.1093/biosci/biaa079, Institutional Repository
Altermatt, F., Little, C. J., Mächler, E., Wang, S., Zhang, X., & Blackman, R. C. (2020). Uncovering the complete biodiversity structure in spatial networks: the example of riverine systems. Oikos, 129(5), 607-618. doi:10.1111/oik.06806, Institutional Repository
Alther, R., & Weber, R. (2020). "Wir rechnen mit weiteren Entdeckungen". Pro Natura Magazine (1), 7-8. , Institutional Repository
Alther, R., Bongni, N., Borko, Š., Fišer, C., & Altermatt, F. (2020). Reiche Grundwasserfauna. Pilotstudie fördert Artenvielfalt zutage. Aqua & Gas, 100(7/8), 36-42. , Institutional Repository
Archambeault, S. L., Durston, D. J., Wan, A., El‐Sabaawi, R. W., Matthews, B., & Peichel, C. L. (2020). Phosphorus limitation does not drive loss of bony lateral plates in freshwater stickleback (Gasterosteus aculeatus). Evolution, International Journal of Organic Evolution, 74(9), 2088-2104. doi:10.1111/evo.14044, Institutional Repository
Baggio, M., Chavas, J. ‐P., Di Falco, S., Hertig, A., & Pomati, F. (2020). The effect of anthropogenic and environmental factors in coupled human‐natural systems: evidence from Lake Zürich. Natural Resource Modeling, 33, e12245 (28 pp.). doi:10.1111/nrm.12245, Institutional Repository
Beck, S. V., Räsänen, K., Leblanc, C. A., Skúlason, S., Jónsson, Z. O., & Kristjánsson, B. K. (2020). Differences among families in craniofacial shape at early life-stages of Arctic charr (Salvelinus alpinus). BMC Developmental Biology, 20(1), 21 (15 pp.). doi:10.1186/s12861-020-00226-0, Institutional Repository
Bergström, A. K., Jonsson, A., Isles, P. D. F., Creed, I. F., & Lau, D. C. P. (2020). Changes in nutritional quality and nutrient limitation regimes of phytoplankton in response to declining N deposition in mountain lakes. Aquatic Sciences, 82(2), 31 (16 pp.). doi:10.1007/s00027-020-0697-1, Institutional Repository
Bernhard, G. H., Neale, R. E., Barnes, P. W., Neale, P. J., Zepp, R. G., Wilson, S. R., … White, C. C. (2020). Environmental effects of stratospheric ozone depletion, UV radiation and interactions with climate change: UNEP Environmental Effects Assessment Panel, update 2019. Photochemical and Photobiological Sciences, 19(5), 542-584. doi:10.1039/d0pp90011g, Institutional Repository
Bernhardt, J. R., O'Connor, M. I., Sunday, J. M., & Gonzalez, A. (2020). Life in fluctuating environments. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1814), 20190454 (22 pp.). doi:10.1098/rstb.2019.0454, Institutional Repository
Bernhardt, J. R., Kratina, P., Pereira, A. L., Tamminen, M., Thomas, M. K., & Narwani, A. (2020). The evolution of competitive ability for essential resources. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1798), 20190247 (10 pp.). doi:10.1098/rstb.2019.0247, Institutional Repository
Blackman, R. C., Bruder, A., Burdon, F. J., Convey, P., Funk, W. C., Jähnig, S. C., … Altermatt, F. (2020). A meeting framework for inclusive and sustainable science. Nature Ecology & Evolution, 4, 668-671. doi:10.1038/s41559-020-1190-x, Institutional Repository
Blackman, R. C., Benucci, M., Donnelly, R. C., Hänfling, B., Harper, L. R., Sellers, G. S., & Lawson Handley, L. (2020). Simple, sensitive and species-specific assays for detecting quagga and zebra mussels (Dreissena rostriformis bugensis and D. polymorpha) using environmental DNA. Management of Biological Invasions, 11(2), 218-236. doi:10.3391/mbi.2020.11.2.04, Institutional Repository
Blackman, R. C., Ling, K. K. S., Harper, L. R., Shum, P., Hänfling, B., & Lawson-Handley, L. (2020). Targeted and passive environmental DNA approaches outperform established methods for detection of quagga mussels, Dreissena rostriformis bugensis in flowing water. Ecology and Evolution, 10(23), 13248-13259. doi:10.1002/ece3.6921, Institutional Repository
Blasco-Costa, I., Seppälä, K., Feijen, F., Zajac, N., Klappert, K., & Jokela, J. (2020). A new species of Atriophallophorus Deblock & Rosé, 1964 (Trematoda: Microphallidae) described from in vitro-grown adults and metacercariae from Potamopyrgus antipodarum (Gray, 1843) (Mollusca: Tateidae). Journal of Helminthology, 94, e108 (15 pp.). doi:10.1017/S0022149X19000993, Institutional Repository
Brantschen, J., Gygax, S., Mestrot, A., & Frossard, A. (2020). Soil Hg contamination impact on earthworms' gut microbiome. Applied Sciences, 10(7), 2565 (19 pp.). doi:10.3390/app10072565, Institutional Repository
Burdon, F. J., McIntosh, A. R., & Harding, J. S. (2020). Mechanisms of trophic niche compression: evidence from landscape disturbance. Journal of Animal Ecology, 89, 730-744. doi:10.1111/1365-2656.13142, Institutional Repository
Burdon, F. J., Bai, Y., Reyes, M., Tamminen, M., Staudacher, P., Mangold, S., … Stamm, C. (2020). Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater. Global Change Biology, 26(11), 6363-6382. doi:10.1111/gcb.15302, Institutional Repository
Cairns, J., Moerman, F., Fronhofer, E. A., Altermatt, F., & Hiltunen, T. (2020). Evolution in interacting species alters predator life-history traits, behaviour and morphology in experimental microbial communities. Proceedings of the Royal Society B: Biological Sciences, 287(1928), 20200652 (10 pp.). doi:10.1098/rspb.2020.0652, Institutional Repository
Carraro, L., Mächler, E., Wüthrich, R., & Altermatt, F. (2020). Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems. Nature Communications, 11, 3585 (12 pp.). doi:10.1038/s41467-020-17337-8, Institutional Repository
Carraro, L., Bertuzzo, E., Fronhofer, E. A., Furrer, R., Gounand, I., Rinaldo, A., & Altermatt, F. (2020). Generation and application of river network analogues for use in ecology and evolution. Ecology and Evolution, 10(14), 7537-7550. doi:10.1002/ece3.6479, Institutional Repository
Carraro, L., Toffolon, M., Rinaldo, A., & Bertuzzo, E. (2020). SESTET: a spatially‐explicit stream temperature model based on equilibrium temperature. Hydrological Processes, 34, 355-369. doi:10.1002/hyp.13591, Institutional Repository
Chanut, P. C. M., Siebers, A. R., & Robinson, C. T. (2020). Flood disturbance affects macroinvertebrate food chain length in an alluvial river floodplain. Freshwater Biology, 65(3), 490-501. doi:10.1111/fwb.13445, Institutional Repository
Coats, D. W., Choi, J., Jung, J. H., Kim, Y. O., Lu, Y., & Nielsen, L. T. (2020). Mixotrophic scrippsielloid dinoflagellates prey on tintinnid ciliates. Aquatic Ecosystem Health and Management, 23(1), 69-78. doi:10.1080/14634988.2020.1727275, Institutional Repository
Dennis, A. B., Ballesteros, G. I., Robin, S., Schrader, L., Bast, J., Berghöfer, J., … Gadau, J. (2020). Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum. BMC Genomics, 21(1), 376 (27 pp.). doi:10.1186/s12864-020-6764-0, Institutional Repository
Dünner, R. P. (2020). Parasite ping pong - host-parasite coevolution, metapopulation structure and genetic diversity (Doctoral dissertation). doi:10.3929/ethz-b-000443380, Institutional Repository
Erős, T., Comte, L., Filipe, A. F., Ruhi, A., Tedesco, P. A., Brose, U., … Olden, J. D. (2020). Effects of nonnative species on the stability of riverine fish communities. Ecography, 43(8), 1156-1166. doi:10.1111/ecog.04985, Institutional Repository
Felmy, A., Weissert, N., Travis, J., & Jokela, J. (2020). Mate availability determines use of alternative reproductive phenotypes in hermaphrodites. Behavioral Ecology, 31(4), 1003-1016. doi:10.1093/beheco/araa046, Institutional Repository
Gatto, M., Bertuzzo, E., Mari, L., Miccoli, S., Carraro, L., Casagrandi, R., & Rinaldo, A. (2020). Spread and dynamics of the COVID-19 epidemic in Italy: effects of emergency containment measures. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(19), 10484-10491. doi:10.1073/pnas.2004978117, Institutional Repository
Gilarranz, L. J. (2020). Generic emergence of modularity in spatial networks. Scientific Reports, 10(1), 8708 (8 pp.). doi:10.1038/s41598-020-65669-8, Institutional Repository
Gounand, I., Little, C. J., Harvey, E., & Altermatt, F. (2020). Global quantitative synthesis of ecosystem functioning across climatic zones and ecosystem types. Global Ecology and Biogeography, 29(7), 1139-1176. doi:10.1111/geb.13093, Institutional Repository
Guntern, J., Eichler, A., Hagedorn, F., Pellissier, L., Schwikowski, M., Seehausen, O., … Altermatt, F. (2020). Übermässige Stickstoff- und Phosphoreinträge schädigen Biodiversität, Wald und Gewässer. Swiss Academies factsheets: Vol. 15/8. doi:10.5281/zenodo.4269631, Institutional Repository
Hafer-Hahmann, N., & Vorburger, C. (2020). Parasitoids as drivers of symbiont diversity in an insect host. Ecology Letters, 23(8), 1232-1241. doi:10.1111/ele.13526, Institutional Repository
Haltiner, L., Hänggi, C., Spaak, P., & Dennis, S. R. (2020). Sex in crowded places: population density regulates reproductive strategy. Hydrobiologia, 847, 1727-1738. doi:10.1007/s10750-019-04143-7, Institutional Repository
Harper, L. R., Lawson Handley, L., Sayer, C. D., Read, D. S., Benucci, M., Blackman, R. C., … Hänfling, B. (2020). Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools. Molecular Ecology. doi:10.1111/mec.15670, Institutional Repository
Harvey, E., Gounand, I., Fronhofer, E. A., & Altermatt, F. (2020). Metaecosystem dynamics drive community composition in experimental, multi-layered spatial networks. Oikos, 129(3), 402-412. doi:10.1111/oik.07037, Institutional Repository
Held, J., Lorimer, T., Pomati, F., Stoop, R., & Albert, C. (2020). Second-order phase transition in phytoplankton trait dynamics. Chaos: An Interdisciplinary Journal of Nonlinear Science, 30(5), 053109 (9 pp.). doi:10.1063/1.5141755, Institutional Repository
Henry, Y., Overgaard, J., & Colinet, H. (2020). Dietary nutrient balance shapes phenotypic traits of Drosophila melanogaster in interaction with gut microbiota. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 241, 110626 (10 pp.). doi:10.1016/j.cbpa.2019.110626, Institutional Repository
Henry, Y., Tarapacki, P., & Colinet, H. (2020). Larval density affects phenotype and surrounding bacterial community without altering gut microbiota in Drosophila melanogaster. FEMS Microbiology Ecology, 96(4), fiaa055 (11 pp.). doi:10.1093/femsec/fiaa055, Institutional Repository
Isles, P. D. F., Jonsson, A., Creed, I. F., & Bergström, A. K. (2020). Does browning affect the identity of limiting nutrients in lakes?. Aquatic Sciences, 82(2), 45 (14 pp.). doi:10.1007/s00027-020-00718-y, Institutional Repository
Isles, P. D. F. (2020). The misuse of ratios in ecological stoichiometry. Ecology, 101(11), e03153 (7 pp.). doi:10.1002/ecy.3153, Institutional Repository
Jacquet, C., Gounand, I., & Altermatt, F. (2020). How pulse disturbances shape size-abundance pyramids. Ecology Letters, 23(6), 1014-1023. doi:10.1111/ele.13508, Institutional Repository
Jacquet, C., & Altermatt, F. (2020). The ghost of disturbance past: long-term effects of pulse disturbances on community biomass and composition. Proceedings of the Royal Society B: Biological Sciences, 287(1930), 20200678 (8 pp.). doi:10.1098/rspb.2020.0678, Institutional Repository
Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., … Chase, J. M. (2020). A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data, 7(1), 6 (15 pp.). doi:10.1038/s41597-019-0344-7, Institutional Repository
Johnson, D. R., & Pomati, F. (2020). A brief guide for the measurement and interpretation of microbial functional diversity. Environmental Microbiology, 22(8), 3039-3048. doi:10.1111/1462-2920.15147, Institutional Repository
Leal, M. C., Anaya-Rojas, J. M., Munro, M. H. G., Blunt, J. W., Melian, C. J., Calado, R., & Lürig, M. D. (2020). Fifty years of capacity building in the search for new marine natural products. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(39), 24165-24172. doi:10.1073/pnas.2007610117, Institutional Repository
Lewington-Pearce, L., Parker, B., Narwani, A., Nielsen, J. M., & Kratina, P. (2020). Diversity and temperature indirectly reduce CO2 concentrations in experimental freshwater communities. Oecologia, 192, 515-527. doi:10.1007/s00442-020-04593-0, Institutional Repository
Li, F., Altermatt, F., Yang, J., An, S., Li, A., & Zhang, X. (2020). Human activities' fingerprint on multitrophic biodiversity and ecosystem functions across a major river catchment in China. Global Change Biology, 26(12), 6867-6879. doi:10.1111/gcb.15357, Institutional Repository
Little, C. J., Fronhofer, E. A., & Altermatt, F. (2020). Nonlinear effects of intraspecific competition alter landscape-wide scaling up of ecosystem function. American Naturalist, 195(3), 432-444. doi:10.1086/707018, Institutional Repository
Lu, Y., Ocaña-Pallarès, E., López-Escardó, D., Dennis, S. R., Monaghan, M. T., Ruiz-Trillo, I., … Wolinska, J. (2020). Revisiting the phylogenetic position of Caullerya mesnili (Ichthyosporea), a common Daphnia parasite, based on 22 protein-coding genes. Molecular Phylogenetics and Evolution, 151, 106891 (8 pp.). doi:10.1016/j.ympev.2020.106891, Institutional Repository
Lüthi, M. N., Vorburger, C., & Dennis, A. B. (2020). A novel RNA virus in the parasitoid wasp Lysiphlebus fabarum: genomic structure, prevalence, and transmission. Viruses, 12(1), 59 (19 pp.). doi:10.3390/v12010059, Institutional Repository
Mansfeldt, C., Deiner, K., Mächler, E., Fenner, K., Eggen, R. I. L., Stamm, C., … Altermatt, F. (2020). Microbial community shifts in streams receiving treated wastewater effluent. Science of the Total Environment, 709, 135727 (12 pp.). doi:10.1016/j.scitotenv.2019.135727, Institutional Repository
Manzi, F., Agha, R., Lu, Y., Ben-Ami, F., & Wolinska, J. (2020). Temperature and host diet jointly influence the outcome of infection in a Daphnia-fungal parasite system. Freshwater Biology, 65(4), 757-767. doi:10.1111/fwb.13464, Institutional Repository
Matthews, B., Jokela, J., Narwani, A., Räsänen, K., Pomati, F., Altermatt, F., … Vorburger, C. (2020). On biological evolution and environmental solutions. Science of the Total Environment, 724, 138194 (7 pp.). doi:10.1016/j.scitotenv.2020.138194, Institutional Repository
McLean, A. H. C., Hrček, J., Parker, B. J., Mathé-Hubert, H., Kaech, H., Paine, C., & Godfray, H. C. J. (2020). Multiple phenotypes conferred by a single insect symbiont are independent. Proceedings of the Royal Society B: Biological Sciences, 287(1929), 20200562 (9 pp.). doi:10.1098/rspb.2020.0562, Institutional Repository
Moerman, F., Arquint, A., Merkli, S., Wagner, A., Altermatt, F., & Fronhofer, E. A. (2020). Evolution under pH stress and high population densities leads to increased density-dependent fitness in the protist Tetrahymena thermophila. Evolution, International Journal of Organic Evolution, 74(3), 573-586. doi:10.1111/evo.13921, Institutional Repository
Moerman, F., Fronhofer, E. A., Wagner, A., & Altermatt, F. (2020). Gene swamping alters evolution during range expansions in the protist Tetrahymena thermophila. Biology Letters, 16(6), 20200244 (7 pp.). doi:10.1098/rsbl.2020.0244, Institutional Repository
Mächler, E., Walser, J. C., & Altermatt, F. (2020). Decision-making and best practices for taxonomy-free environmental DNA metabarcoding in biomonitoring using Hill numbers. Molecular Ecology. doi:10.1111/mec.15725, Institutional Repository
Mächler, E. (2020). Environmental DNA for rivers: from degradation processes to diversity analysis and monitoring (Doctoral dissertation). Universität Zürich, Zürich, 272 p. , Institutional Repository
Niggli, U., Altermatt, F., Finger, R., Lehmann, B., Schindler, M., Studer, B., … Waibel, P. (2020). Food for people and planet. In P. Edwards & G. Wuelser (Eds.), Swiss Academies reports: Vol. 15(5). Priority themes for Swiss sustainability research (pp. 20-23). Bern: Swiss Academies of Alerts and Sciences (a+). , Institutional Repository
Paillex, A., Siebers, A. R., Ebi, C., Mesman, J., & Robinson, C. T. (2020). High stream intermittency in an alpine fluvial network: Val Roseg, Switzerland. Limnology and Oceanography, 65, 557-568. doi:10.1002/lno.11324, Institutional Repository
Pastor, A., Hernández-del Amo, E., Giménez-Grau, P., Fillol, M., Pereda, O., Flores, L., … Catalán, N. (2020). Early-career coordinated distributed experiments: empowerment through collaboration. Frontiers in Education, 5, 13 (7 pp.). doi:10.3389/feduc.2020.00013, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Anwendung von eDNA-Methoden in biologischen Untersuchungen und bei der biologischen Bewertung von aquatischen Ökosystemen. Richtlinien. Umwelt-Wissen: Vol. 2010. Retrieved from, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Environmental DNA applications in biomonitoring and bio-assessment of aquatic ecosystems. Guidelines. Environmental studies: Vol. 2010. Retrieved from, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., & Altermatt, F. (2020). Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology, 29(22), 4258-4264. doi:10.1111/mec.15643, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Utilisations de l'ADN environnemental pour la surveil-lance et l'évaluation biologiques des écosystèmes aquatiques. Directives. Connais-sance de l'environnement: Vol. 2010. Retrieved from, Institutional Repository
Piano, E., Souffreau, C., Merckx, T., Baardsen, L. F., Backeljau, T., Bonte, D., … Hendrickx, F. (2020). Urbanization drives cross-taxon declines in abundance and diversity at multiple spatial scales. Global Change Biology, 26(3), 1196-1211. doi:10.1111/gcb.14934, Institutional Repository
Pilla, R. M., Williamson, C. E., Adamovich, B. V., Adrian, R., Anneville, O., Chandra, S., … Zadereev, E. (2020). Deeper waters are changing less consistently than surface waters in a global analysis of 102 lakes. Scientific Reports, 10, 20514 (15 pp.). doi:10.1038/s41598-020-76873-x, Institutional Repository
Pomati, F., Shurin, J. B., Andersen, K. H., Tellenbach, C., & Barton, A. D. (2020). Interacting temperature, nutrients and zooplankton grazing control phytoplankton size-abundance relationships in eight Swiss Lakes. Frontiers in Microbiology, 10, 3155 (17 pp.). doi:10.3389/fmicb.2019.03155, Institutional Repository
Rat, M., Mathe-Hubert, H., McKechnie, A. E., Sueur, C., & Cunningham, S. J. (2020). Extreme and variable environmental temperatures are linked to reduction of social network cohesiveness in a highly social passerine. Oikos, 129(11), 1597-1610. doi:10.1111/oik.07463, Institutional Repository
Robinson, C. T., Schweizer, P., Larsen, A., Schubert, C. J., & Siebers, A. R. (2020). Beaver effects on macroinvertebrate assemblages in two streams with contrasting morphology. Science of the Total Environment, 722, 137899 (9 pp.). doi:10.1016/j.scitotenv.2020.137899, Institutional Repository
Robinson, C. T., Hediger, I., Li, J., & Rosenthal, A. (2020). Towards integrating art and freshwater science. Freshwater Science, 39(2), 347-348. doi:10.1086/708948, Institutional Repository
Rossbacher, S., & Vorburger, C. (2020). Prior adaptation of parasitoids improves biological control of symbiont-protected pests. Evolutionary Applications, 13(8), 1868-1876. doi:10.1111/eva.12934, Institutional Repository
Russo, S., Lürig, M., Hao, W., Matthews, B., & Villez, K. (2020). Active learning for anomaly detection in environmental data. Environmental Modelling and Software, 134, 104869 (11 pp.). doi:10.1016/j.envsoft.2020.104869, Institutional Repository
Sarremejane, R., Cid, N., Stubbington, R., Datry, T., Alp, M., Cañedo-Argüelles, M., … Bonada, N. (2020). DISPERSE, a trait database to assess the dispersal potential of European aquatic macroinvertebrates. Scientific Data, 7(1), 386 (9 pp.). doi:10.1038/s41597-020-00732-7, Institutional Repository
Seppälä, O., Lively, C. M., & Jokela, J. (2020). Coinfecting parasites can modify fluctuating selection dynamics in host-parasite coevolution. Ecology and Evolution, 10(18), 9600-9612. doi:10.1002/ece3.6373, Institutional Repository
Sieber, N. M. (2020). Detection of aquatic wildlife pathogens from eDNA in water samples. Validation and application in Switzerland (Doctoral dissertation). ETH Zurich, Zurich, 176 p. , Institutional Repository
Sieber, N., Hartikainen, H., & Vorburger, C. (2020). Validation of an eDNA-based method for the detection of wildlife pathogens in water. Diseases of Aquatic Organisms, 141, 171-184. doi:10.3354/dao03524, Institutional Repository
Siebers, A. R., Paillex, A., Misteli, B., & Robinson, C. T. (2020). Effects of an experimental increase in flow intermittency on an alpine stream. Hydrobiologia, 847, 3453-3470. doi:10.1007/s10750-020-04350-7, Institutional Repository
Stephenson, J. F., Stevens, M., Troscianko, J., & Jokela, J. (2020). The size, symmetry, and color saturation of a male guppy's ornaments forecast his resistance to parasites. American Naturalist, 196(5), 597-608. doi:10.1086/711033, Institutional Repository
Stockwell, J. D., Doubek, J. P., Adrian, R., Anneville, O., Carey, C. C., Carvalho, L., … Wilson, H. L. (2020). Storm impacts on phytoplankton community dynamics in lakes. Global Change Biology, 26(5), 2756-2784. doi:10.1111/gcb.15033, Institutional Repository
Strepparava, N., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., Wahli, T., Segner, H., & Bailey, C. (2020). Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout (Salmo trutta). Transboundary and Emerging Diseases, 67(6), 2642-2652. doi:10.1111/tbed.13615, Institutional Repository
Stähly, S., Franca, M. J., Robinson, C. T., & Schleiss, A. J. (2020). Erosion, transport and deposition of a sediment replenishment under flood conditions. Earth Surface Processes and Landforms, 45(13), 3354-3367. doi:10.1002/esp.4970, Institutional Repository
Tabi, A., Pennekamp, F., Altermatt, F., Alther, R., Fronhofer, E. A., Horgan, K., … Saavedra, S. (2020). Species multidimensional effects explain idiosyncratic responses of communities to environmental change. Nature Ecology & Evolution, 4, 1036-1043. doi:10.1038/s41559-020-1206-6, Institutional Repository
Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., … de Vries, F. T. (2020). Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications, 11, 1351 (12 pp.). doi:10.1038/s41467-020-15014-4, Institutional Repository
Vanvelk, H., Govaert, L., van den Berg, E. M., Brans, K. I., & De Meester, L. (2020). Interspecific differences, plastic, and evolutionary responses to a heat wave in three co-occurring Daphnia species. Limnology and Oceanography. doi:10.1002/lno.11675, Institutional Repository
Weber, C., Sprecher, L., Åberg, U., Thomas, G., Baumgartner, S., & Haertel-Borer, S. (2020). Wirkungskontrollen mit Wirkung: Gemeinsam lernen für Revitalisierungen. Wasser, Energie, Luft, 112(1), 41-47. , Institutional Repository


Altermatt, F., Alther, R., Fišer, C., & Švara, V. (2019). Amphipoda (Flohkrebse) der Schweiz. Checkliste, Bestimmung und Atlas. Fauna Helvetica: Vol. 32. Neuchâtel: info fauna. , Institutional Repository
Alther, R., Thompson, C., Lods-Crozet, B., & Robinson, C. T. (2019). Macroinvertebrate diversity and rarity in non-glacial Alpine streams. Aquatic Sciences, 81(3), 42 (14 pp.). doi:10.1007/s00027-019-0642-3, Institutional Repository
Anaya-Rojas, J. M., Best, R. J., Brunner, F. S., Eizaguirre, C., Leal, M. C., Melián, C. J., … Matthews, B. (2019). An experimental test of how parasites of predators can influence trophic cascades and ecosystem functioning. Ecology, 100(8), e02744 (12 pp.). doi:10.1002/ecy.2744, Institutional Repository
Arce, M. I., Mendoza-Lera, C., Almagro, M., Catalán, N., Romaní, A. M., Martí, E., … von Schiller, D. (2019). A conceptual framework for understanding the biogeochemistry of dry riverbeds through the lens of soil science. Earth-Science Reviews, 188, 441-453. doi:10.1016/j.earscirev.2018.12.001, Institutional Repository
Baho, D. L., Pomati, F., Leu, E., Hessen, D. O., Moe, S. J., Norberg, J., & Nizzetto, L. (2019). A single pulse of diffuse contaminants alters the size distribution of natural phytoplankton communities. Science of the Total Environment, 683, 578-588. doi:10.1016/j.scitotenv.2019.05.229, Institutional Repository
Baho, D. L., Leu, E., Pomati, F., Hessen, D. O., Norberg, J., Moe, S. J., … Nizzetto, L. (2019). Resilience of natural phytoplankton communities to pulse disturbances from micropollutant exposure and vertical mixing. Environmental Toxicology and Chemistry, 38(10), 2197-2208. doi:10.1002/etc.4536, Institutional Repository
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Gounand, I., Harvey, E., Little, C. J., & Altermatt, F. (2018). Meta-Ecosystems 2.0: rooting the theory into the field. Trends in Ecology and Evolution, 33(1), 36-46. doi:10.1016/j.tree.2017.10.006, Institutional Repository
Gounand, I., Harvey, E., Little, C. J., & Altermatt, F. (2018). On embedding meta-ecosystems into a socioecological framework: a reply to Renaud et al.. Trends in Ecology and Evolution, 33(7), 484-486. doi:10.1016/j.tree.2018.04.004, Institutional Repository
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Lange, K., Meier, P., Trautwein, C., Schmid, M., Robinson, C. T., Weber, C., & Brodersen, J. (2018). Basin-scale effects of small hydropower on biodiversity dynamics. Frontiers in Ecology and the Environment, 16(7), 397-404. doi:10.1002/fee.1823, Institutional Repository
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Li, F., Peng, Y., Fang, W., Altermatt, F., Xie, Y., Yang, J., & Zhang, X. (2018). Application of environmental DNA metabarcoding for predicting anthropogenic pollution in rivers. Environmental Science and Technology, 52(20), 11708-11719. doi:10.1021/acs.est.8b03869, Institutional Repository
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Little, C. J., & Altermatt, F. (2018). Landscape configuration alters spatial arrangement of terrestrial-aquatic subsidies in headwater streams. Landscape Ecology, 33(9), 1519-1531. doi:10.1007/s10980-018-0678-0, Institutional Repository
Little, C. J., & Altermatt, F. (2018). Species turnover and invasion of dominant freshwater invertebrates alter biodiversity-ecosystem-function relationship. Ecological Monographs, 88(3), 461-480. doi:10.1002/ecm.1299, Institutional Repository
Lu, Y., Johnston, P. R., Dennis, S. R., Monaghan, M. T., John, U., Spaak, P., & Wolinska, J. (2018). Daphnia galeata responds to the exposure to an ichthyosporean gut parasite by down-regulation of immunity and lipid metabolism. BMC Genomics, 19, 932 (10 pp.). doi:10.1186/s12864-018-5312-7, Institutional Repository
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Milani, G., Volpi, M., Tonolla, D., Doering, M., Robinson, C., Kneubühler, M., & Schaepman, M. (2018). Robust quantification of riverine land cover dynamics by high-resolution remote sensing. Remote Sensing of Environment, 217, 491-505. doi:10.1016/j.rse.2018.08.035, Institutional Repository
Monchamp, M. E., Spaak, P., Domaizon, I., Dubois, N., Bouffard, D., & Pomati, F. (2018). Homogenization of lake cyanobacterial communities over a century of climate change and eutrophication. Nature Ecology & Evolution, 2, 317-324. doi:10.1038/s41559-017-0407-0, Institutional Repository
Mächler, E., Osathanunkul, M., & Altermatt, F. (2018). Shedding light on eDNA: neither natural levels of UV radiation nor the presence of a filter feeder affect eDNA-based detection of aquatic organisms. PLoS One, 13(4), e0195529 (15 pp.). doi:10.1371/journal.pone.0195529, Institutional Repository
Pawlowski, J., Kelly-Quinn, M., Altermatt, F., Apothéloz-Perret-Gentil, L., Beja, P., Boggero, A., … Kahlert, M. (2018). The future of biotic indices in the ecogenomic era: integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems. Science of the Total Environment, 637-638, 1295-1310. doi:10.1016/j.scitotenv.2018.05.002, Institutional Repository
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Piccolroaz, S., Toffolon, M., Robinson, C. T., & Siviglia, A. (2018). Exploring and quantifying river thermal response to heatwaves. Water, 10(8), 1098 (18 pp.). doi:10.3390/w10081098, Institutional Repository
Robinson, C. T., Siebers, A. R., & Ortlepp, J. (2018). Long-term ecological responses of the River Spöl to experimental floods. Freshwater Science, 37(3), 433-447. doi:10.1086/699481, Institutional Repository
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Serrana, J. M., Yaegashi, S., Kondoh, S., Li, B., Robinson, C. T., & Watanabe, K. (2018). Ecological influence of sediment bypass tunnels on macroinvertebrates in dam-fragmented rivers by DNA metabarcoding. Scientific Reports, 8, 10185 (10 pp.). doi:10.1038/s41598-018-28624-2, Institutional Repository
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Siqueira, A., Ricaurte, L. F., Borges, G. A., Nunes, G. M., & Wantzen, K. M. (2018). The role of private rural properties for conserving native vegetation in Brazilian Southern Amazonia. Regional Environmental Change, 18(1), 21-32. doi:10.1007/s10113-015-0824-z, Institutional Repository
Soliveres, S., Lehmann, A., Boch, S., Altermatt, F., Carrara, F., Crowther, T. W., … Allan, E. (2018). Intransitive competition is common across five major taxonomic groups and is driven by productivity, competitive rank and functional traits. Journal of Ecology, 106(3), 852-864. doi:10.1111/1365-2745.12959, Institutional Repository
Song, C., Altermatt, F., Pearse, I., & Saavedra, S. (2018). Structural changes within trophic levels are constrained by within-family assembly rules at lower trophic levels. Ecology Letters, 21(8), 1221-1228. doi:10.1111/ele.13091, Institutional Repository
Stephenson, J. F., Perkins, S. E., & Cable, J. (2018). Transmission risk predicts avoidance of infected conspecifics in Trinidadian guppies. Journal of Animal Ecology, 87(6), 1525-1533. doi:10.1111/1365-2656.12885, Institutional Repository
Strepparava, N., Segner, H., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., & Wahli, T. (2018). Temperature-related parasite infection dynamics: the case of proliferative kidney disease of brown trout. Parasitology, 145(3), 281-291. doi:10.1017/S0031182017001482, Institutional Repository
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Thomas, M. K., Fontana, S., Reyes, M., Kehoe, M., & Pomati, F. (2018). The predictability of a lake phytoplankton community, over time-scales of hours to years. Ecology Letters, 21(5), 619-628. doi:10.1111/ele.12927, Institutional Repository
Tomanović, Ž., Mitrović, M., Petrović, A., Kavallieratos, N. G., Žikić, V., Ivanović, A., … Vorburger, C. (2018). Revision of the European Lysiphlebus species (Hymenoptera: Braconidae: Aphidiinae) on the basis of COI and 28SD2 molecular markers and morphology. Arthropod Systematics & Phylogeny, 76(2), 179-213. Retrieved from, Institutional Repository
Tonkin, J. D., Heino, J., & Altermatt, F. (2018). Metacommunities in river networks: the importance of network structure and connectivity on patterns and processes. Freshwater Biology, 63(1), 1-5. doi:10.1111/fwb.13045, Institutional Repository
Tonkin, J. D., Altermatt, F., Finn, D. S., Heino, J., Olden, J. D., Pauls, S. U., & Lytle, D. A. (2018). The role of dispersal in river network metacommunities: patterns, processes, and pathways. Freshwater Biology, 63(1), 141-163. doi:10.1111/fwb.13037, Institutional Repository
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Van Petegem, K., Moerman, F., Dahirel, M., Fronhofer, E. A., Vandegehuchte, M. L., Van Leeuwen, T., … Bonte, D. (2018). Kin competition accelerates experimental range expansion in an arthropod herbivore. Ecology Letters, 21(2), 225-234. doi:10.1111/ele.12887, Institutional Repository
Vetsch, D., Allen, J., Belser, A., Boes, R., Brodersen, J., Fink, S., … Weitbrecht, V. (2018). Lebensraum Gewässer – Sedimentdynamik und Vernetzung. Forschungsprogramm «Wasserbau und Ökologie». Wasser, Energie, Luft, 110(1), 19-24. Retrieved from, Institutional Repository
Vogler, H. (2018). Long-term trends in the ecohydrology of the Macun lakes system (Master thesis). 39 p. , Institutional Repository
Vorburger, C. (2018). Symbiont-conferred resistance to parasitoids in aphids - challenges for biological control. Biological Control, 116, 17-26. doi:10.1016/j.biocontrol.2017.02.004, Institutional Repository
Vorburger, C., & Perlman, S. J. (2018). The role of defensive symbionts in host-parasite coevolution. Biological Reviews, 93(4), 1747-1764. doi:10.1111/brv.12417, Institutional Repository
Wüthrich, R. (2018). Analysis of macroinvertebrate diversity in relation to riverine processes (Master thesis). 93 p. , Institutional Repository
von Babo, M., Chmiel, C., Müggler, S. A., Rakusa, J., Schuppli, C., Meier, P., … Urner, M. (2018). Transfusion practice in anemic, non-bleeding patients: cross-sectional survey of physicians working in general internal medicine teaching hospitals in Switzerland. PLoS One, 13(1), e0191752 (18pp.). doi:10.1371/journal.pone.0191752, Institutional Repository


Abiven, S., Altermatt, F., Backhaus, N., Deplazes-Zemp, A., Furrer, R., Korf, B., … Schaepman, M. E. (2017). Integrative research efforts at the boundary of biodiversity and global change research. Current Opinion in Environmental Sustainability, 29, 215-222. doi:10.1016/j.cosust.2018.04.016, Institutional Repository
Alther, R., Fišer, C., Konec, M., Švara, V., & Altermatt, F. (2017). Das Hölloch: ein Flohkrebs-Hotspot in der Schweiz. Le Hölloch: un hot spot des amphipodes en Suisse. Stalactite, 67(1), 18-24. , Institutional Repository
Alther, R., Fišer, C., & Altermatt, F. (2017). Description of a widely distributed but overlooked amphipod species in the European Alps. Zoological Journal of the Linnean Society, 179(4), 751-766. doi:10.1111/zoj.12477, Institutional Repository
Astegiano, J., Altermatt, F., & Massol, F. (2017). Disentangling the co-structure of multilayer interaction networks: degree distribution and module composition in two-layer bipartite networks. Scientific Reports, 7, 15465 (11 pp.). doi:10.1038/s41598-017-15811-w, Institutional Repository
Baumgartner, S. D., & Robinson, C. T. (2017). Changes in macroinvertebrate trophic structure along a land-use gradient within a lowland stream network. Aquatic Sciences, 79(2), 407-418. doi:10.1007/s00027-016-0506-z, Institutional Repository
Baumgartner, S. D., & Robinson, C. T. (2017). Short-term colonization dynamics of macroinvertebrates in restored channelized streams. Hydrobiologia, 784(1), 321-335. doi:10.1007/s10750-016-2886-4, Institutional Repository
Best, R. J., Anaya-Rojas, J. M., Leal, M. C., Schmid, D. W., Seehausen, O., & Matthews, B. (2017). Transgenerational selection driven by divergent ecological impacts of hybridizing lineages. Nature Ecology & Evolution, 1, 1757-1765. doi:10.1038/s41559-017-0308-2, Institutional Repository
Brosed, M., Jabiol, J., & Gessner, M. O. (2017). Nutrient stoichiometry of aquatic hyphomycetes: Interstrain variation and ergosterol conversion factors. Fungal Ecology, 29, 96-102. doi:10.1016/j.funeco.2017.04.008, Institutional Repository
Brunner, F. S., Anaya-Rojas, J. M., Matthews, B., & Eizaguirre, C. (2017). Experimental evidence that parasites drive eco-evolutionary feedbacks. Proceedings of the National Academy of Sciences of the United States of America PNAS, 114(14), 3678-3683. doi:10.1073/pnas.1619147114, Institutional Repository
Bürkli, A., Sieber, N., Seppälä, K., & Jokela, J. (2017). Comparing direct and indirect selfing rate estimates: when are population-structure estimates reliable?. Heredity, 118, 525-533. doi:10.1038/hdy.2017.1, Institutional Repository
Bürkli, A., & Wilson, A. B. (2017). Explaining high-diversity death assemblages: undersampling of the living community, out-of-habitat transport, time-averaging of rare taxa, and local extinction. Palaeogeography, Palaeoclimatology, Palaeoecology, 466, 174-183. doi:10.1016/j.palaeo.2016.11.022, Institutional Repository
Bürkli, A., & Jokela, J. (2017). Increase in multiple paternity across the reproductive lifespan in a sperm-storing, hermaphroditic freshwater snail. Molecular Ecology, 26(19), 5264-5278. doi:10.1111/mec.14200, Institutional Repository
Carraro, L., Bertuzzo, E., Mari, L., Fontes, I., Hartikainen, H., Strepparava, N., … Rinaldo, A. (2017). Integrated field, laboratory, and theoretical study of PKD spread in a Swiss prealpine river. Proceedings of the National Academy of Sciences of the United States of America PNAS, 114(45), 11992-11997. doi:10.1073/pnas.1713691114, Institutional Repository
Carter, M. J., Lind, M. I., Dennis, S. R., Hentley, W., & Beckerman, A. P. (2017). Evolution of a predator-induced, nonlinear reaction norm. Proceedings of the Royal Society B: Biological Sciences, 284(1861), 20170859 (10 pp.). doi:10.1098/rspb.2017.0859, Institutional Repository
Costa Leal, M., Best, R. J., Durston, D., El-Sabaawi, R. W., & Matthews, B. (2017). Stoichiometric traits of stickleback: effects of genetic background, rearing environment, and ontogeny. Ecology and Evolution, 7(8), 2617-2625. doi:10.1002/ece3.2802, Institutional Repository
De Ventura, L., Weissert, N., Tobias, R., Kopp, K., & Jokela, J. (2017). Identifying target factors for interventions to increase boat cleaning in order to prevent spread of invasive species. Management of Biological Invasions, 8(1), 71-84. doi:10.3391/mbi.2017.8.1.07, Institutional Repository
De Ventura, L., Kopp, K., Seppälä, K., & Jokela, J. (2017). Tracing the quagga mussel invasion along the Rhine river system using eDNA markers: early detection and surveillance of invasive zebra and quagga mussels. Management of Biological Invasions, 8(1), 101-112. doi:10.3391/mbi.2017.8.1.10, Institutional Repository
Deiner, K., Bik, H. M., Mächler, E., Seymour, M., Lacoursière-Roussel, A., Altermatt, F., … Bernatchez, L. (2017). Environmental DNA metabarcoding: transforming how we survey animal and plant communities. Molecular Ecology, 26(21), 5872-5895. doi:10.1111/mec.14350, Institutional Repository
Dennis, A. B., Patel, V., Oliver, K. M., & Vorburger, C. (2017). Parasitoid gene expression changes after adaptation to symbiont-protected hosts. Evolution, International Journal of Organic Evolution, 71(11), 2599-2617. doi:10.1111/evo.13333, Institutional Repository
Di Cugno, N., & Robinson, C. T. (2017). Trophic structure of macroinvertebrates in alpine non-glacial streams. Fundamental and Applied Limnology, 190(4), 319-330. doi:10.1127/fal/2017/1045, Institutional Repository
Döring, M., Facchini, M., Fink, S., Franca, M. J., Martín Sanz, E., Robinson, C., … Weber, C. (2017). Dinamica dei sedimenti e misurazione dei suoi effetti. In M. Di Giulio (Ed.), Studi sull'ambiente: Vol. UW-1708-I. Dinamica dei sedimenti e degli habitat. Schede tematiche sulla sistemazione e l’ecologia dei corsi d’acqua (p. (12 pp.). Retrieved from, Institutional Repository
Döring, M., Facchini, M., Fink, S., Franca, M. J., Martín Sanz, E., Robinson, C., … Weber, C. (2017). Mesurer la dynamique des sédiments et ses effets. In M. Di Giulio (Ed.), Connaissance de l'environnement: Vol. UW-1708-F. Dynamique du charriage et des habitats. Recueil de fiches sur l’aménagement et l’écologie des cours d’eau (p. (12 pp.). Retrieved from, Institutional Repository
Döring, M., Facchini, M., Fink, S., Franca, M. J., Martín Sanz, E., Robinson, C., … Weber, C. (2017). Sedimentdynamik und ihre Auswirkungen messen. In M. Di Giulio (Ed.), Umwelt-Wissen: Vol. UW-1708-D. Geschiebe- und Habitatsdynamik. Merkblatt-Sammlung Wasserbau und Ökologie (p. (12 pp.). Retrieved from, Institutional Repository
Facchini, M., Martín Sanz, E., Fink, S., Vetsch, D., Robinson, C., Döring, M., … Boes, R. (2017). Galeries de déviation et crues artificielles. In M. Di Giulio (Ed.), Connaissance de l'environnement: Vol. UW-1708-F. Dynamique du charriage et des habitats. Recueil de fiches sur l’aménagement et l’écologie des cours d’eau (p. (8 pp.). Retrieved from, Institutional Repository
Facchini, M., Martín Sanz, E., Fink, S., Vetsch, D., Robinson, C., Döring, M., … Boes, R. (2017). Gallerie di bypass dei sedimenti e piene artificiali. In M. Di Giulio (Ed.), Studi sull'ambiente: Vol. UW-1708-I. Dinamica dei sedimenti e degli habitat. Schede tematiche sulla sistemazione e l’ecologia dei corsi d’acqua (p. (8 pp.). Retrieved from, Institutional Repository
Facchini, M., Martín Sanz, E., Fink, S., Vetsch, D., Robinson, C., Döring, M., … Boes, R. (2017). Sedimentumleitstollen und künstliche Hochwasser. In M. Di Giulio (Ed.), Umwelt-Wissen: Vol. UW-1708-D. Geschiebe- und Habitatsdynamik. Merkblatt-Sammlung Wasserbau und Ökologie (p. (8 pp.). Retrieved from, Institutional Repository
Fink, S., Döring, M., Franca, M. J., Martín Sanz, E., Nadyeina, O., Robinson, C., … Scheidegger, C. (2017). Dinamica e biodiversità nelle golene. In M. Di Giulio (Ed.), Studi sull'ambiente: Vol. UW-1708-I. Dinamica dei sedimenti e degli habitat. Schede tematiche sulla sistemazione e l’ecologia dei corsi d’acqua (p. (12 pp.). Retrieved from, Institutional Repository
Fink, S., Döring, M., Franca, M. J., Martín Sanz, E., Nadyeina, O., Robinson, C., … Scheidegger, C. (2017). Dynamik und Biodiversität in Auen. In M. Di Giulio (Ed.), Umwelt-Wissen: Vol. UW-1708-D. Geschiebe- und Habitatsdynamik. Merkblatt-Sammlung Wasserbau und Ökologie (p. (12 pp.). Retrieved from, Institutional Repository
Fink, S., Döring, M., Franca, M. J., Martín Sanz, E., Nadyeina, O., Robinson, C., … Scheidegger, C. (2017). Dynamique et biodiversité des zones alluviales. In M. Di Giulio (Ed.), Connaissance de l'environnement: Vol. UW-1708-F. Dynamique du charriage et des habitats. Recueil de fiches sur l’aménagement et l’écologie des cours d’eau (p. (12 pp.). Retrieved from, Institutional Repository
Fišer, C., Konec, M., Alther, R., Švara, V., & Altermatt, F. (2017). Taxonomic, phylogenetic and ecological diversity of Niphargus (Amphipoda: Crustacea) in the Hölloch cave system (Switzerland). Systematics and Biodiversity, 15(3), 218-237. doi:10.1080/14772000.2016.1249112, Institutional Repository
Fontes, I., Hartikainen, H., Taylor, N. G. H., & Okamura, B. (2017). Conditional persistence and tolerance characterize endoparasite–colonial host interactions. Parasitology, 144(8), 1052-1063. doi:10.1017/S0031182017000269, Institutional Repository
Fontes, I., Hartikainen, H., Williams, C., & Okamura, B. (2017). Persistence, impacts and environmental drivers of covert infections in invertebrate hosts. Parasites and Vectors, 10(1), 542 (15 pp.). doi:10.1186/s13071-017-2495-8, Institutional Repository
Fontes, I., Hartikainen, H., Holland, J. W., Secombes, C. J., & Okamura, B. (2017). Tetracapsuloides bryosalmonae abundance in river water. Diseases of Aquatic Organisms, 124(2), 145-157. doi:10.3354/dao03116, Institutional Repository
Fronhofer, E. A., & Altermatt, F. (2017). Classical metapopulation dynamics and eco-evolutionary feedbacks in dendritic networks. Ecography, 40(12), 1455-1466. doi:10.1111/ecog.02761, Institutional Repository
Fronhofer, E. A., Gut, S., & Altermatt, F. (2017). Evolution of density-dependent movement during experimental range expansions. Journal of Evolutionary Biology, 30(12), 2165-2176. doi:10.1111/jeb.13182, Institutional Repository
Fronhofer, E. A., Nitsche, N., & Altermatt, F. (2017). Information use shapes the dynamics of range expansions into environmental gradients. Global Ecology and Biogeography, 26(4), 400-411. doi:10.1111/geb.12547, Institutional Repository
Gallien, L., Altermatt, F., Wiemers, M., Schweiger, O., & Zimmermann, N. E. (2017). Invasive plants threaten the least mobile butterflies in Switzerland. Diversity and Distributions, 23(2), 185-195. doi:10.1111/ddi.12513, Institutional Repository
Giometto, A., Altermatt, F., & Rinaldo, A. (2017). Demographic stochasticity and resource autocorrelation control biological invasions in heterogeneous landscapes. Oikos, 126(11), 1554-1563. doi:10.1111/oik.04330, Institutional Repository
Godwin, C. M., Hietala, D. C., Lashaway, A. R., Narwani, A., Savage, P. E., & Cardinale, B. J. (2017). Ecological stoichiometry meets ecological engineering: using polycultures to enhance the multifunctionality of algal biocrude systems. Environmental Science and Technology, 51(19), 11450-11458. doi:10.1021/acs.est.7b02137, Institutional Repository
Gounand, I., Harvey, E., Ganesanandamoorthy, P., & Altermatt, F. (2017). Subsidies mediate interactions between communities across space. Oikos, 126(7), 972-979. doi:10.1111/oik.03922, Institutional Repository
Harvey, E., Gounand, I., Ward, C. L., & Altermatt, F. (2017). Bridging ecology and conservation: from ecological networks to ecosystem function. Journal of Applied Ecology, 54(2), 371-379. doi:10.1111/1365-2664.12769, Institutional Repository
Harvey, E., Gounand, I., Ward, C. L., & Altermatt, F. (2017). Der Artenschutz am Scheideweg. Nature + Paysage. Natur + Landschaft: Inside (1), 21-25. , Institutional Repository
Harvey, E., Gounand, I., Little, C. J., Fronhofer, E. A., & Altermatt, F. (2017). Upstream trophic structure modulates downstream community dynamics via resource subsidies. Ecology and Evolution, 7, 5724-5731. doi:10.1002/ece3.3144, Institutional Repository
Hietala, D. C., Koss, C. K., Narwani, A., Lashaway, A. R., Godwin, C. M., Cardinale, B. J., & Savage, P. E. (2017). Influence of biodiversity, biochemical composition, and species identity on the quality of biomass and biocrude oil produced via hydrothermal liquefaction. Algal Research, 26, 203-214. doi:10.1016/j.algal.2017.07.020, Institutional Repository
Horvath, Z., Vad, C. F., Preiler, C., Birtel, J., Matthews, B., Ptáčníková, R., & Ptáčník, R. (2017). Zooplankton communities and Bythotrephes longimanus in lakes of the montane region of the northern Alps. Inland Waters, 7(1), 3-13. doi:10.1080/20442041.2017.1294317, Institutional Repository
Hänggi, C. (2017). Population genomics of Daphnia galeata during decades of environmental change (Master thesis). 59 p. , Institutional Repository
Irniger, A., Morari, M. J., Bürkli, A., & Detert, M. (2017). Automatic high-throughput measurement of live aquatic snails from images. Journal of Molluscan Studies, 83(2), 235-239. doi:10.1093/mollus/eyx004, Institutional Repository
Klaiber, J., Altermatt, F., Birrer, S., Chittaro, Y., Dziock, F., Gonseth, Y., … Bergamini, A. (2017). Fauna Indicativa. WSL Berichte: Vol. 54. Retrieved from, Institutional Repository
Kremer, C. T., Thomas, M. K., & Litchman, E. (2017). Temperature- and size-scaling of phytoplankton population growth rates: reconciling the Eppley curve and the metabolic theory of ecology. Limnology and Oceanography, 62(4), 1658-1670. doi:10.1002/lno.10523, Institutional Repository
Krismer, J., Tamminen, M., Fontana, S., Zenobi, R., & Narwani, A. (2017). Single-cell mass spectrometry reveals the importance of genetic diversity and plasticity for phenotypic variation in nitrogen-limited Chlamydomonas. ISME Journal, 11(4), 988-998. doi:10.1038/ismej.2016.167, Institutional Repository
Langeloh, L., Behrmann-Godel, J., & Seppälä, O. (2017). Natural selection on immune defense: a field experiment. Evolution, International Journal of Organic Evolution, 71(2), 227-237. doi:10.1111/evo.13148, Institutional Repository
Leal, M. C., Seehausen, O., & Matthews, B. (2017). The ecology and evolution of stoichiometric phenotypes. Trends in Ecology and Evolution, 32(2), 108-117. doi:10.1016/j.tree.2016.11.006, Institutional Repository
Legrand, D., Cote, J., Fronhofer, E. A., Holt, R. D., Ronce, O., Schtickzelle, N., … Clobert, J. (2017). Eco-evolutionary dynamics in fragmented landscapes. Ecography, 40(1), 9-25. doi:10.1111/ecog.02537, Institutional Repository
Leicht, K., Seppälä, K., & Seppälä, O. (2017). Potential for adaptation to climate change: family-level variation in fitness-related traits and their responses to heat waves in a snail population. BMC Evolutionary Biology, 17, 140 (10 pp.). doi:10.1186/s12862-017-0988-x, Institutional Repository
Leys, M., Keller, I., Robinson, C. T., & Räsänen, K. (2017). Cryptic lineages of a common alpine mayfly show strong life-history divergence. Molecular Ecology, 26(6), 1670-1686. doi:10.1111/mec.14026, Institutional Repository
Limberger, R., Birtel, J., Farias, D. D. S., & Matthews, B. (2017). Ecosystem flux and biotic modification as drivers of metaecosystem dynamics. Ecology, 98(4), 1082-1092. doi:10.1002/ecy.1742, Institutional Repository
Lindtke, D., Lucek, K., Soria-Carrasco, V., Villoutreix, R., Farkas, T. E., Riesch, R., … Nosil, P. (2017). Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect. Molecular Ecology, 26(22), 6189-6205. doi:10.1111/mec.14280, Institutional Repository
Little, C. J., Chapuis, M. P., Blondin, L., Chapuis, E., & Jourdan-Pineau, H. (2017). Exploring the relationship between tychoparthenogenesis and inbreeding depression in the Desert Locust, Schistocerca gregaria. Ecology and Evolution, 7, 6003-6011. doi:10.1002/ece3.3103, Institutional Repository
Little, C. J., Cutting, H., Alatalo, J., & Cooper, E. (2017). Short-term herbivory has long-term consequences in warmed and ambient high Arctic tundra. Environmental Research Letters, 12(2), 1-13. doi:10.1088/1748-9326/aa579d, Institutional Repository
Loxdale, H. D., Edwards, O., Tagu, D., & Vorburger, C. (2017). Population genetic issues: new insights using conventional molecular markers and genomics tools. In H. F. van Emden & R. Harrington (Eds.), Aphids as crop pests (pp. 50-80). Wallingford: CABI. , Institutional Repository
Lundsgaard-Hansen, B., Matthews, B., Aebischer, T., & Seehausen, O. (2017). The legacy of ecosystem effects caused by adaptive radiation. Copeia, 105(3), 550-557. doi:10.1643/CE-16-514, Institutional Repository
Lüthi, M. (2017). Detection and characterization of a novel RNA virus associated with the parasitoid wasp Lysiphlebus fabarum (Master thesis). 99 p. , Institutional Repository
Martín, E. J., Doering, M., & Robinson, C. T. (2017). Ecological assessment of a sediment by-pass tunnel on a receiving stream in Switzerland. River Research and Applications, 33(6), 925-936. doi:10.1002/rra.3145, Institutional Repository
Martín Sanz, E. J. (2017). Flow sediment interactions in managed rivers: influence on ecosystem structure and function (Doctoral dissertation). doi:10.3929/ethz-b-000000140, Institutional Repository
Massol, F., Altermatt, F., Gounand, I., Gravel, D., Leibold, M. A., & Mouquet, N. (2017). How life-history traits affect ecosystem properties: effects of dispersal in meta-ecosystems. Oikos, 126(4), 532-546. doi:10.1111/oik.03893, Institutional Repository
Milner, A. M., Khamis, K., Battin, T. J., Brittain, J. E., Barrand, N. E., Füreder, L., … Brown, L. E. (2017). Glacier shrinkage driving global changes in downstream systems. Proceedings of the National Academy of Sciences of the United States of America PNAS, 114(37), 9770-9778. doi:10.1073/pnas.1619807114, Institutional Repository
Monchamp, M. E. (2017). Sedimentary DNA reveals centuries of hidden diversity in lake cyanobacterial communities (Doctoral dissertation). doi:10.3929/ethz-b-000166606, Institutional Repository
Monchamp, M. E., Enache, I., Turko, P., Pomati, F., Rîşnnoveanu, G., & Spaak, P. (2017). Sedimentary and egg-bank DNA from 3 European lakes reveal concurrent changes in the composition and diversity of cyanobacterial and Daphnia communities. Hydrobiologia, 800, 155-172. doi:10.1007/s10750-017-3247-7, Institutional Repository
Moretti, M., Dias, A. T. C., de Bello, F., Altermatt, F., Chown, S. L., Azcárate, F. M., … Berg, M. P. (2017). Handbook of protocols for standardized measurement of terrestrial invertebrate functional traits. Functional Ecology, 31(3), 558-567. doi:10.1111/1365-2435.12776, Institutional Repository
Mori, N., Simčič, T., Brancelj, A., Robinson, C. T., & Doering, M. (2017). Spatiotemporal heterogeneity of actual and potential respiration in two contrasting floodplains. Hydrological Processes, 31(14), 2622-2636. doi:10.1002/hyp.11211, Institutional Repository
Munz, N. A., Burdon, F. J., de Zwart, D., Junghans, M., Melo, L., Reyes, M., … Stamm, C. (2017). Pesticides drive risk of micropollutants in wastewater-impacted streams during low flow conditions. Water Research, 110, 366-377. doi:10.1016/j.watres.2016.11.001, Institutional Repository
Naisbett-Jones, L. C., Putman, N. F., Stephenson, J. F., Ladak, S., & Young, K. A. (2017). A magnetic map leads juvenile European eels to the gulf stream. Current Biology, 27(8), 1236-1240. doi:10.1016/j.cub.2017.03.015, Institutional Repository
Narwani, A., Bentlage, B., Alexandrou, M. A., Fritschie, K. J., Delwiche, C., Oakley, T. H., & Cardinale, B. J. (2017). Ecological interactions and coexistence are predicted by gene expression similarity in freshwater green algae. Journal of Ecology, 105(3), 580-591. doi:10.1111/1365-2745.12759, Institutional Repository
Paillex, A., Castella, E., zu Ermgassen, P., Gallardo, B., & Aldridge, D. C. (2017). Large river floodplain as a natural laboratory: non-native macroinvertebrates benefit from elevated temperatures. Ecosphere, 8(10), e01972 (16 pp.). doi:10.1002/ecs2.1972, Institutional Repository
Parreño, M. A., Ivanović, A., Petrović, A., Žikić, V., Tomanović, Ž., & Vorburger, C. (2017). Wing shape as a taxonomic trait: separating genetic variation from host-induced plasticity in aphid parasitoids. Zoological Journal of the Linnean Society, 180, 288-297. doi:10.1111/zoj.12490, Institutional Repository
Pastor, A., Lupon, A., Gómez-Gener, L., Rodríguez-Castillo, T., Abril, M., Arce, M. I., … Catalán, N. (2017). Local and regional drivers of headwater streams metabolism: insights from the first AIL collaborative project. Limnetica, 36(1), 67-85. doi:10.23818/limn.36.06, Institutional Repository
Pennekamp, F., Griffiths, J. I., Fronhofer, E. A., Garnier, A., Seymour, M., Altermatt, F., & Petchey, O. L. (2017). Dynamic species classification of microorganisms across time, abiotic and biotic environments - a sliding window approach. PLoS One, 12(5), e0176682 (22 pp.). doi:10.1371/journal.pone.0176682, Institutional Repository
Pomati, F., Matthews, B., Seehausen, O., & Ibelings, B. W. (2017). Eutrophication and climate warming alter spatial (depth) co-occurrence patterns of lake phytoplankton assemblages. Hydrobiologia, 787(1), 375-385. doi:10.1007/s10750-016-2981-6, Institutional Repository
Pomati, F., Jokela, J., Castiglioni, S., Thomas, M. K., & Nizzetto, L. (2017). Water-borne pharmaceuticals reduce phenotypic diversity and response capacity of natural phytoplankton communities. PLoS One, 12(3), e0174207 (18 pp.). doi:10.1371/journal.pone.0174207, Institutional Repository
Putman, N. F., Naisbett- Jones, L. C., Stephenson, J. F., Ladak, S., & Young, K. A. (2017). Response to Durif et al.. Current Biology, 27(18), R979-R1001. doi:10.1016/j.cub.2017.08.046, Institutional Repository
Reyes, M., Spaak, P., & Pomati, F. (2017). Test of in situ (underwater) automated imaging, as provided by the Scripps Plankton Camera, for monitoring and analysis of lake phytoplankton. Dübendorf: Eawag. , Institutional Repository
Riesch, R., Muschick, M., Lindtke, D., Villoutreix, R., Comeault, A. A., Farkas, T. E., … Nosil, P. (2017). Transitions between phases of genomic differentiation during stick-insect speciation. Nature Ecology & Evolution, 1(4), 0082 (13 pp.). doi:10.1038/s41559-017-0082, Institutional Repository
Rossbacher, S. (2017). Influence of wastewater treatment plants on Tetracapsuloides bryosalmonae presence and concentration in water samples (Bachelor thesis). Switzerland, 7 p. , Institutional Repository
Ryan, C. N., Thomas, M. K., & Litchman, E. (2017). The effects of phosphorus and temperature on the competitive success of an invasive cyanobacterium. Aquatic Ecology, 51(3), 463-472. doi:10.1007/s10452-017-9629-0, Institutional Repository
Salo, T., Stamm, C., Burdon, F. J., Räsänen, K., & Seppälä, O. (2017). Resilience to heat waves in the aquatic snail Lymnaea stagnalis: additive and interactive effects with micropollutants. Freshwater Biology, 62(11), 1831-1846. doi:10.1111/fwb.12999, Institutional Repository
Schaller, J., Hines, J., & Brackhage, C. (2017). Is initial Si concentration determining the influence of warming and N-supply on stoichiometric changes during litter decomposition?. Aquatic Botany, 138, 1-8. doi:10.1016/j.aquabot.2016.11.013, Institutional Repository
Schiff, H. (2017). Development of a massively multiplexed ligation-dependent assay for antibiotic resistance gene detection (Master thesis). 70 p. , Institutional Repository
Schillewaert, S., Parmentier, T., Vantaux, A., Van den Ende, W., Vorburger, C., & Wenseleers, T. (2017). The influence of facultative endosymbionts on honeydew carbohydrate and amino acid composition of the black bean aphid Aphis fabae. Physiological Entomology, 42(2), 125-133. doi:10.1111/phen.12181, Institutional Repository
Spaak, J. W., Baert, J. M., Baird, D. J., Eisenhauer, N., Maltby, L., Pomati, F., … De Laender, F. (2017). Shifts of community composition and population density substantially affect ecosystem function despite invariant richness. Ecology Letters, 20(10), 1315-1324. doi:10.1111/ele.12828, Institutional Repository
Stamm, C., Burdon, F., Fischer, S., Kienle, C., Munz, N., Tlili, A., … Eggen, R. (2017). Einfluss von Mikroverunreinigungen. Aqua & Gas, 97(6), 90-95. , Institutional Repository
Stephenson, J. F., Young, K. A., Fox, J., Jokela, J., Cable, J., & Perkins, S. E. (2017). Host heterogeneity affects both parasite transmission to and fitness on s