Department Aquatic Ecology

Publications

2022

Ahmed, S., Soorae, P. S., Hammadi, E. A., Zaabi, R. A., Saji, A., Khan, S. B., … Dhaheri, S. A. (2022). Does habitat heterogeneity influence taxonomic richness and abundance? A case study from a terrestrial protected area in Abu Dhabi, United Arab Emirates. Saudi Journal of Biological Sciences, 29, 1737-1746. doi:10.1016/j.sjbs.2021.10.056, Institutional Repository
Alther, R. (2022). Amphipodes. In Connaissance de l’environnement: Vol. UW-2220-F. Espèces exotiques en Suisse. Aperçu des espèces exotiques et de leurs conséquences. État 2022 (pp. 29-30). Bern: Office fédéral de l’environnement OFEV. , Institutional Repository
Alther, R. (2022). Amphipods. In Environmental studies: Vol. UW-2220-E. Alien species in Switzerland. An inventory of alien species and their impact. Situation as of 2022 (pp. 29-30). Bern: Federal Office for the Environement FOEN. , Institutional Repository
Alther, R. (2022). Flohkrebse. In Umwelt-Wissen: Vol. UW-2220-D. Gebietsfremde Arten in der Schweiz. Übersicht über die gebietsfremden Arten und ihre Auswirkungen. Stand 2022 (pp. 29-30). Bern: Bundesamt für Umwelt (BAFU). , Institutional Repository
Beck, S. V., Räsänen, K., Kristjánsson, B. K., Skúlason, S., Jónsson, Z. O., Tsinganis, M., & Leblanc, C. A. (2022). Variation in egg size and offspring phenotype among and within seven Arctic charr morphs. Ecology and Evolution, 12(10), e9427 (16 pp.). doi:10.1002/ece3.9427, Institutional Repository
Blackman, R. C., Walser, J. ‐C., Rüber, L., Brantschen, J., Villalba, S., Brodersen, J., … Altermatt, F. (2022). General principles for assignments of communities from eDNA: open versus closed taxonomic databases. Environmental DNA. doi:10.1002/edn3.382, Institutional Repository
Blackman, R. C., Brantschen, J., Walser, J. C., Wüthrich, R., & Altermatt, F. (2022). Monitoring invasive alien macroinvertebrate species with environmental DNA. River Research and Applications, 38(8), 1400-1412. doi:10.1002/rra.3947, Institutional Repository
Blackman, R. C., Ho, H. C., Walser, J. C., & Altermatt, F. (2022). Spatio-temporal patterns of multi-trophic biodiversity and food-web characteristics uncovered across a river catchment using environmental DNA. Communications Biology, 5, 259 (11 pp.). doi:10.1038/s42003-022-03216-z, Institutional Repository
Borko, Š., Altermatt, F., Zagmajster, M., & Fišer, C. (2022). A hotspot of groundwater amphipod diversity on a crossroad of evolutionary radiations. Diversity and Distributions, 28(12), 2765-2777. doi:10.1111/ddi.13500, Institutional Repository
Borrero-Santiago, A. R., Dellisanti, W., Sánchez-Quinto, A., Moreno-Andrés, J., Nemoy, P., Richa, K., … Mestre, M. (2022). Using Margalef's vision to understand the current aquatic microbial ecology. Scientia Marina, 86(1), e026 (9 pp.). doi:10.3989/scimar.05199.026, Institutional Repository
Brantschen, J., Pellissier, L., Walser, J. C., & Altermatt, F. (2022). Evaluation of primer pairs for eDNA-based assessment of Ephemeroptera, Plecoptera, and Trichoptera across a biogeographically diverse region. Environmental DNA, 4(6), 1356-1368. doi:10.1002/edn3.342, Institutional Repository
Brosse, M., Benateau, S., Gaudard, A., Stamm, C., & Altermatt, F. (2022). The importance of indirect effects of climate change adaptations on alpine and pre‐alpine freshwater systems. Ecological Solutions and Evidence, 3(1), e12127 (8 pp.). doi:10.1002/2688-8319.12127, Institutional Repository
Bruijning, M., Fossen, E. I. F., Jongejans, E., Vanvelk, H., Raeymaekers, J. A. M., Govaert, L., … De Meester, L. (2022). Host–parasite dynamics shaped by temperature and genotype: quantifying the role of underlying vital rates. Functional Ecology, 36, 485-499. doi:10.1111/1365-2435.13966, Institutional Repository
Bryner, A., & Spaak, P. (2022). Hauslabor für die Eawag-Wasserforschung. In F. Gartmann & F. Auderset (Eds.), Neujahrsblatt der Naturforschenden Gesellschaft in Zürich NGZH: Vol. 224. Der Greifensee. Symbiose von Naherholung und Naturschutz? (pp. 44-56). Fällanden: Verband zum Schutz des Greifensees. , Institutional Repository
Burdon, F. J., Reyes, M., Schönenberger, U., Räsänen, K., Tiegs, S. D., Eggen, R. I. L., & Stamm, C. (2022). Environmental context determines pollution impacts on ecosystem functioning. Oikos. doi:10.1111/oik.09131, Institutional Repository
Carraro, L., & Altermatt, F. (2022). Optimal Channel Networks accurately model ecologically-relevant geomorphological features of branching river networks. Communications Earth & Environment, 3, 125 (10 pp.). doi:10.1038/s43247-022-00454-1, Institutional Repository
Consoli, G., Haller, R. M., Döring, M., Hashemi, S., & Robinson, C. T. (2022). Tributary effects on the ecological responses of a regulated river to experimental floods. Journal of Environmental Management, 303, 114122 (16 pp.). doi:10.1016/j.jenvman.2021.114122, Institutional Repository
Costello, D. M., Tiegs, S. D., Boyero, L., Canhoto, C., Capps, K. A., Danger, M., … Zwart, J. A. (2022). Global patterns and controls of nutrient immobilization on decomposing cellulose in riverine ecosystems. Global Biogeochemical Cycles, 36(3), e2021GB007163 (15 pp.). doi:10.1029/2021GB007163, Institutional Repository
Cote, J., Dahirel, M., Schtickzelle, N., Altermatt, F., Ansart, A., Blanchet, S., … Legrand, D. (2022). Dispersal syndromes in challenging environments: a cross-species experiment. Ecology Letters, 25(12), 2675-2687. doi:10.1111/ele.14124, Institutional Repository
Drost, A. M., Siebers, A. R., Paillex, A., Misteli, B., Peeters, E. T. H. M., & Robinson, C. T. (2022). Long-lasting effects of experimental flow intermittency on alpine stream macroinvertebrates (Val Roseg, Switzerland). Hydrobiologia, 849, 1931-1946. doi:10.1007/s10750-022-04843-7, Institutional Repository
Farinha, A. T., di Tria, J., Reyes, M., Rosas, C., Pang, O., Zufferey, R., … Kovac, M. (2022). Off-shore and underwater sampling of aquatic environments with the aerial-aquatic drone MEDUSA. Frontiers in Environmental Science, 10, 1023269 (12 pp.). doi:10.3389/fenvs.2022.1023269, Institutional Repository
Feijen, F., Zajac, N., Vorburger, C., Blasco-Costa, I., & Jokela, J. (2022). Phylogeography and cryptic species structure of a locally adapted parasite in New Zealand. Molecular Ecology, 31(15), 4112-4126. doi:10.1111/mec.16570, Institutional Repository
Fišer, C., Borko, Š., Delić, T., Kos, A., Premate, E., Zagmajster, M., … Altermatt, F. (2022). The European Green Deal misses Europe's subterranean biodiversity hotspots. Nature Ecology & Evolution, 6, 1403-1404. doi:10.1038/s41559-022-01859-z, Institutional Repository
Gallego, I., & Narwani, A. (2022). Ecology and evolution of competitive trait variation in natural phytoplankton communities under selection. Ecology Letters, 25, 2397-2409. doi:10.1111/ele.14103, Institutional Repository
Gebert, F., Obrist, M. K., Siber, R., Altermatt, F., Bollmann, K., & Schuwirth, N. (2022). Recent trends in stream macroinvertebrates: warm-adapted and pesticide-tolerant taxa increase in richness. Biology Letters, 18(3), 20210513 (7 pp.). doi:10.1098/rsbl.2021.0513, Institutional Repository
Gilarranz, L. J., Narwani, A., Odermatt, D., Siber, R., & Dakos, V. (2022). Regime shifts, trends, and variability of lake productivity at a global scale. Proceedings of the National Academy of Sciences of the United States of America PNAS, 119(35), e2116413119 (6 pp.). doi:10.1073/pnas.2116413119, Institutional Repository
Govaert, L., Pantel, J. H., & De Meester, L. (2022). Quantifying eco-evolutionary contributions to trait divergence in spatially structured systems. Ecological Monographs, 92(4), e1531 (21 pp.). doi:10.1002/ecm.1531, Institutional Repository
Haltiner, L., Zhang, H., Anneville, O., De Ventura, L., DeWeber, J. T., Hesselschwerdt, J., … Dennis, S. R. (2022). The distribution and spread of quagga mussels in perialpine lakes north of the Alps. Aquatic Invasions, 17(2), 153-173. doi:10.3391/ai.2022.17.2.02, Institutional Repository
Hattich, G. S. I., Listmann, L., Govaert, L., Pansch, C., Reusch, T. B. H., & Matthiessen, B. (2022). Experimentally decomposing phytoplankton community change into ecological and evolutionary contributions. Functional Ecology, 36(1), 120-132. doi:10.1111/1365-2435.13923, Institutional Repository
Hauer, F. R., Lorang, M. S., & Gonser, T. (2022). Remote sensing to characterize river floodplain structure and function. Remote Sensing, 14(5), 1132 (22 pp.). doi:10.3390/rs14051132, Institutional Repository
Henry, Y., Brechbühler, E., & Vorburger, C. (2022). Gated communities: inter- and intraspecific diversity of endosymbionts across four sympatric aphid species. Frontiers in Ecology and Evolution, 10, 816184 (7 pp.). doi:10.3389/fevo.2022.816184, Institutional Repository
Ho, H. C., Brodersen, J., Gossner, M. M., Graham, C. H., Kaeser, S., Reji Chacko, M., … Altermatt, F. (2022). Blue and green food webs respond differently to elevation and land use. Nature Communications, 13(1), 6415 (12 pp.). doi:10.1038/s41467-022-34132-9, Institutional Repository
Holenstein, K., Harvey, E., & Altermatt, F. (2022). Patch size distribution affects species invasion dynamics in dendritic networks. Oikos, 2022, e08679 (11 pp.). doi:10.1111/oik.08679, Institutional Repository
Jacquet, C., Carraro, L., & Altermatt, F. (2022). Meta‐ecosystem dynamics drive the spatial distribution of functional groups in river networks. Oikos, 2022(11), e09372 (12 pp.). doi:10.1111/oik.09372, Institutional Repository
Jardim de Queiroz, L., Doenz, C. J., Altermatt, F., Alther, R., Borko, Š., Brodersen, J., … Seehausen, O. (2022). Climate, immigration and speciation shape terrestrial and aquatic biodiversity in the European Alps. Proceedings of the Royal Society B: Biological Sciences, 289(1980), 20221020 (10 pp.). doi:10.1098/rspb.2022.1020, Institutional Repository
Jog, M. G., Sackett, M. E., Kisty, S. D., Hansen, J. A., & Stephenson, J. F. (2022). The behaviour of infected guppies depends on social context, parasite tolerance and host sex. Animal Behaviour, 187, 97-104. doi:10.1016/j.anbehav.2022.03.001, Institutional Repository
Kaech, H., Jud, S., & Vorburger, C. (2022). Similar cost of Hamiltonella defensa in experimental and natural aphid‐endosymbiont associations. Ecology and Evolution, 12(1), e8551 (13 pp.). doi:10.1002/ece3.8551, Institutional Repository
Kahlert, M., Maaria Karjalainen, S., Keck, F., Kelly, M., Ramon, M., Rimet, F., … Zimmermann, J. (2022). Co-occurrence, ecological profiles and geographical distribution based on unique molecular identifiers of the common freshwater diatoms Fragilaria and Ulnaria. Ecological Indicators, 141, 109114 (13 pp.). doi:10.1016/j.ecolind.2022.109114, Institutional Repository
Keck, F., Hürlemann, S., Locher, N., Stamm, C., Deiner, K., & Altermatt, F. (2022). A triad of kicknet sampling, eDNA metabarcoding, and predictive modeling to assess richness of mayflies, stoneflies and caddisflies in rivers. Metabarcoding and Metagenomics, 6, 117-131. doi:10.3897/mbmg.6.79351, Institutional Repository
Keck, F., Blackman, R. C., Bossart, R., Brantschen, J., Couton, M., Hürlemann, S., … Altermatt, F. (2022). Meta-analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment. Molecular Ecology, 31(6), 1820-1835. doi:10.1111/mec.16364, Institutional Repository
Keck, F., Couton, M., & Altermatt, F. (2022). Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses. Molecular Ecology Resources. doi:10.1111/1755-0998.13746, Institutional Repository
Kyathanahally, S. P., Hardeman, T., Reyes, M., Merz, E., Bulas, T., Brun, P., … Baity-Jesi, M. (2022). Ensembles of data-efficient vision transformers as a new paradigm for automated classification in ecology. Scientific Reports, 12, 18590 (11 pp.). doi:10.1038/s41598-022-21910-0, Institutional Repository
Langeloh, L., Jokela, J., Seppälä, K., & Seppälä, O. (2022). Ecological determinants of variation in phenotypic selection on quantitative immune defence traits. Oikos. doi:10.1111/oik.09506, Institutional Repository
Leu, M., Bucher, H., Vennemann, T., Bagherpour, B., Ji, C., Brosse, M., & Goudemand, N. (2022). A Unitary Association-based conodont biozonation of the Smithian-Spathian boundary (Early Triassic) and associated biotic crisis from South China. Swiss Journal of Palaeontology, 141(1), 19 (61 pp.). doi:10.1186/s13358-022-00259-x, Institutional Repository
Li, F., Zhang, Y., Altermatt, F., Zhang, X., Cai, Y., & Yang, Z. (2022). Gap analysis for DNA-based biomonitoring of aquatic ecosystems in China. Ecological Indicators, 137, 108732 (11 pp.). doi:10.1016/j.ecolind.2022.108732, Institutional Repository
Llaberia-Robledillo, M., Balbuena, J. A., Sarabeev, V., & Llopis-Belenguer, C. (2022). Changes in native and introduced host–parasite networks. Biological Invasions, 24, 543-555. doi:10.1007/s10530-021-02657-7, Institutional Repository
Luo, M., Wang, S., Saavedra, S., Ebert, D., & Altermatt, F. (2022). Multispecies coexistence in fragmented landscapes. Proceedings of the National Academy of Sciences of the United States of America PNAS, 119(37), e2201503119 (8 pp.). doi:10.1073/pnas.2201503119, Institutional Repository
Martini, J., Walther, F., Schenekar, T., Birnstiel, E., Wüthrich, R., Oester, R., … Vitecek, S. (2022). The last hideout: abundance patterns of the not-quite-yet extinct mayfly Prosopistoma pennigerum in the Albanian Vjosa River network. Insect Conservation and Diversity (13 pp.). doi:10.1111/icad.12620, Institutional Repository
Mathers, K. L., Robinson, C. T., & Weber, C. (2022). Patchiness in flow refugia use by macroinvertebrates following an artificial flood pulse. River Research and Applications, 38, 696-707. doi:10.1002/rra.3941, Institutional Repository
Mausbach, J., Laurila, A., & Räsänen, K. (2022). Context dependent variation in corticosterone and phenotypic divergence of Rana arvalis populations along an acidification gradient. BMC Ecology and Evolution, 22(1), 11 (19 pp.). doi:10.1186/s12862-022-01967-1, Institutional Repository
McFadden, I. R., Sendek, A., Brosse, M., Bach, P. M., Baity‐Jesi, M., Bolliger, J., … Narwani, A. (2022). Linking human impacts to community processes in terrestrial and freshwater ecosystems. Ecology Letters. doi:10.1111/ele.14153, Institutional Repository
Moerman, F., Fronhofer, E. A., Altermatt, F., & Wagner, A. (2022). Selection on growth rate and local adaptation drive genomic adaptation during experimental range expansions in the protist Tetrahymena thermophila. Journal of Animal Ecology, 91(6), 1088-1103. doi:10.1111/1365-2656.13598, Institutional Repository
Moor, H., Bergamini, A., Vorburger, C., Holderegger, R., Bühler, C., Egger, S., & Schmidt, B. R. (2022). Bending the curve: simple but massive conservation action leads to landscape-scale recovery of amphibians. Proceedings of the National Academy of Sciences of the United States of America PNAS, 119(42), e2123070119 (8 pp.). doi:10.1073/pnas.2123070119, Institutional Repository
Moor, H., Gossner, M. M., Graham, C., Hobi, M. L., Logar, I., Narwani, A., … Altermatt, F. (2022). Besserer Biodiversitätsschutz in Blau-Grünen Ökosystemen. Des écosystèmes bleus-verts pour mieux protéger la biodiversité. Nature et Paysage. Natur und Landschaft: Inside (1), 25-29. , Institutional Repository
Moor, H., Gossner, M. M., Graham, C., Hobi, M. L., Logar, I., Matthews, B., … Altermatt, F. (2022). Blau-grüne Biodiversität ist ein wichtiger Teil des Waldes. Wald und Holz, 103(4), 30-33. , Institutional Repository
Moza, M. I., & Postolache, C. (2022). Optimized protocol for cyanobacterial 16s rrna analysis in Danube Delta lakes. Biointerface Research in Applied Chemistry, 12(2), 1365-1384. doi:10.33263/BRIAC122.13651384, Institutional Repository
Narayan, K. S., Vorburger, C., & Hafer‐Hahmann, N. (2022). Bottom‐up effect of host protective symbionts on parasitoid diversity: limited evidence from two field experiments. Journal of Animal Ecology, 91(3), 643-654. doi:10.1111/1365-2656.13650, Institutional Repository
Oester, R., dos Reis Oliveira, P. C., Moretti, M. S., Altermatt, F., & Bruder, A. (2022). Leaf-associated macroinvertebrate assemblage and leaf litter breakdown in headwater streams depend on local riparian vegetation. Hydrobiologia. doi:10.1007/s10750-022-05049-7, Institutional Repository
Olive, M., Moerman, F., Fernandez-Cassi, X., Altermatt, F., & Kohn, T. (2022). Removal of waterborne viruses by Tetrahymena pyriformis is virus-specific and coincides with changes in protist swimming speed. Environmental Science and Technology, 56(7), 4062-4070. doi:10.1021/acs.est.1c05518, Institutional Repository
Palamara, G. M., Dennis, S. R., Haenggi, C., Schuwirth, N., & Reichert, P. (2022). Investigating the effect of pesticides on Daphnia population dynamics by inferring structure and parameters of a stochastic model. Ecological Modelling, 472, 110076 (13 pp.). doi:10.1016/j.ecolmodel.2022.110076, Institutional Repository
Parreño, M. A., Petchey, S., Chapman, M., Altermatt, F., Backhaus, N., Deplazes-Zemp, A., … Petchey, O. L. (2022). How puzzles are shaping our understanding of biodiversity. A call for more research into biodiversity representation in educational games. GAIA: Ecological Perspectives for Science and Society, 31(3), 139-145. doi:10.14512/gaia.31.3.3, Institutional Repository
Peszek, Ł., Kawecka, B., & Robinson, C. T. (2022). Long-term response of diatoms in high-elevation streams influenced by rock glaciers. Ecological Indicators, 144, 109515 (12 pp.). doi:10.1016/j.ecolind.2022.109515, Institutional Repository
Puccinelli, E., Zeppilli, D., Stefanoudis, P. V., Wittische-Helou, A., Kermorgant, M., Fuchs, S., … Weber, A. A. T. (2022). Hybrid conferences: opportunities, challenges and ways forward. Frontiers in Marine Science, 9, 902772 (13 pp.). doi:10.3389/fmars.2022.902772, Institutional Repository
Rajarajan, A., Wolinska, J., Walser, J. C., Dennis, S. R., & Spaak, P. (2022). Host-associated bacterial communities vary between Daphnia galeata genotypes but not by host genetic distance. Microbial Ecology. doi:10.1007/s00248-022-02011-x, Institutional Repository
Rajarajan, A., Wolinska, J., Walser, J. C., Mäder, M., & Spaak, P. (2022). Infection by a eukaryotic gut parasite in wild Daphnia sp. associates with a distinct bacterial community. FEMS Microbiology Ecology, 98(10), fiac097 (9 pp.). doi:10.1093/femsec/fiac097, Institutional Repository
Robinson, C. T., Jolidon, C., Consoli, G., Bloem, S., & Ebi, C. (2022). Temporal dynamics in the physico-chemistry of a high-alpine stream network in the Swiss National Park. eco.mont, 14(2), 11-23. doi:10.1553/eco.mont-14-2s11, Institutional Repository
Scaramella, N., Mausbach, J., Laurila, A., Stednitz, S., & Räsänen, K. (2022). Short-term responses of Rana arvalis tadpoles to pH and predator stress: adaptive divergence in behavioural and physiological plasticity?. Journal of Comparative Physiology B, 192, 669-682. doi:10.1007/s00360-022-01449-2, Institutional Repository
Sendek, A., Baity-Jesi, M., Altermatt, F., Bader, M. K. F., Liebhold, A. M., Turner, R. M., … Brockerhoff, E. G. (2022). Fewer non-native insects in freshwater than in terrestrial habitats across continents. Diversity and Distributions, 28(11), 2303-2315. doi:10.1111/ddi.13622, Institutional Repository
Seppälä, O., Yohannes, E., & Salo, T. (2022). Condition-dependent immune function in a freshwater snail revealed by stable isotopes. Freshwater Biology, 67(7), 1287-1297. doi:10.1111/fwb.13917, Institutional Repository
Shaw, K., Vogel, M., Andriessen, N., Hardeman, T., Dorea, C. C., & Strande, L. (2022). Towards globally relevant, small-footprint dewatering solutions: Optimal conditioner dose for highly variable blackwater from non-sewered sanitation. Journal of Environmental Management, 321, 115961 (11 pp.). doi:10.1016/j.jenvman.2022.115961, Institutional Repository
Sieber, N., Hartikainen, H., Krieg, R., Zenker, A., & Vorburger, C. (2022). Parasite DNA detection in water samples enhances crayfish plague monitoring in asymptomatic invasive populations. Biological Invasions, 24, 281-297. doi:10.1007/s10530-021-02644-y, Institutional Repository
Siebers, A. R., Paillex, A., & Robinson, C. T. (2022). Seasonal and functional variation in the trophic base of intermittent Alpine streams. Limnology and Oceanography, 67(5), 1098-1110. doi:10.1002/lno.12059, Institutional Repository
Smolander, O. P., Blande, D., Ahola, V., Rastas, P., Tanskanen, J., Kammonen, J. I., … Saastamoinen, M. (2022). Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map. GigaScience, 11, giab097 (12 pp.). doi:10.1093/gigascience/giab097, Institutional Repository
Sommerwerk, N., Bloesch, J., Baumgartner, C., Bittl, T., Čerba, D., Csányi, B., … Ungureanu, L. (2022). The Danube River Basin. In K. Tockner, C. Zarfl, & C. T. Robinson (Eds.), Rivers of Europe (pp. 81-180). doi:10.1016/B978-0-08-102612-0.00003-1, Institutional Repository
Stritt, C., Gimmi, E. L., Wyler, M., Bakali, A. H., Skalska, A., Hasterok, R., … Roulin, A. C. (2022). Migration without interbreeding: evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes. Molecular Ecology, 31(1), 70-85. doi:10.1111/mec.16207, Institutional Repository
Studer, A., Knüsel, M., Alther, R., Hürlemann, S., & Altermatt, F. (2022). Erfassung der Grundwasserflohkrebse. Studie zur Artenvielfalt und Verbreitung im Einzugsgebiet der Töss. Aqua & Gas, 102(4), 14-19. , Institutional Repository
Su, E., S. Fischer, R. Demmer-Steingruber, Nigg, S., Güsewell, S., Albrich, W. C., … Kahlert, C. R. (2022). Humoral and cellular responses to mRNA-based COVID-19 booster vaccinations in patients with solid neoplasms under active treatment. ESMO Open, 7(5), 100587 (11 pp.). doi:10.1016/j.esmoop.2022.100587, Institutional Repository
Tamminen, M., Spaak, J., Tlili, A., Eggen, R., Stamm, C., & Räsänen, K. (2022). Wastewater constituents impact biofilm microbial community in receiving streams. Science of the Total Environment, 807(3), 151080 (8 pp.). doi:10.1016/j.scitotenv.2021.151080, Institutional Repository
Tockner, K., Tonolla, D., Bremerich, V., Jähnig, S. C., Robinson, C. T., & Zarfl, C. (2022). Introduction to European rivers. In K. Trockner, C. Zarfl, & C. T. Robinson (Eds.), Rivers of Europe (pp. 1-26). doi:10.1016/B978-0-08-102612-0.00001-8, Institutional Repository
Tockner, K., Zarfl, C., & Robinson, C. T. (2022). Rivers of Europe (2nd ed.). doi:10.1016/B978-0-08-102612-0.01001-4, Institutional Repository
Tomanović, Ž., Kavallieratos, N. G., Ye, Z., Nika, E. P., Petrović, A., Vollhardt, I. M. G., & Vorburger, C. (2022). Cereal aphid parasitoids in Europe (Hymenoptera: Braconidae: Aphidiinae): taxonomy, biodiversity, and ecology. Insects, 13(12), 1142 (25 pp.). doi:10.3390/insects13121142, Institutional Repository
Travers Cook, T. J., Skirgaila, C., Martin, O. Y., & Buser, C. C. (2022). Infection by dsRNA viruses is associated with enhanced sporulation efficiency in Saccharomyces cerevisiae. Ecology and Evolution, 12(1), e8558 (8 pp.). doi:10.1002/ece3.8558, Institutional Repository
Twining, C. W., Weber, C., Kowarik, C., Gossner, M. M., Graham, C. H., Matthews, B., & Shipley, J. R. (2022). Zum Fressen gern: unsere Gewässer aus der Vogelperspektive. Wasser, Energie, Luft, 114(2), 68-74. , Institutional Repository
Udodenko, Y. G., Robinson, C. T., Choijil, J., Badrakh, R., Munkhbat, J., Ivanova, E. S., & Komov, V. T. (2022). Mercury levels in sediment, fish and macroinvertebrates of the Boroo River, northern Mongolia, under the legacy of gold mining. Ecotoxicology, 31, 312-323. doi:10.1007/s10646-021-02502-6, Institutional Repository
Vorburger, C. (2022). Defensive symbionts and the evolution of parasitoid host specialization. Annual Review of Entomology, 67, 329-346. doi:10.1146/annurev-ento-072621-062042, Institutional Repository
Zia, A., Schroth, A. W., Hecht, J. S., Isles, P., Clemins, P. J., Turnbull, S., … Pinder, G. (2022). Climate change-legacy phosphorus synergy hinders lake response to aggressive water policy targets. Earth's Future, 10(5), e2021EF002234 (17 pp.). doi:10.1029/2021EF002234, Institutional Repository
van Moorsel, S. J., Thébault, E., Radchuk, V., Narwani, A., Montoya, J. M., Dakos, V., … Pennekamp, F. (2022). Predicting effects of multiple interacting global change drivers across trophic levels. Global Change Biology. doi:10.1111/gcb.16548, Institutional Repository
Çetin, C., Furman, A., Kalkan, E., & Bilgin, R. (2022). Mitonuclear genetic patterns of divergence in the marbled crab, Pachygrapsus marmoratus (Fabricius, 1787) along the Turkish seas. PLoS One, 17(4), e0266506 (21 pp.). doi:10.1371/journal.pone.0266506, Institutional Repository

2021

Alberti, M., Palkovacs, E. P., Des Roches, S., De Meester, L., Brans, K. I., Govaert, L., … Verrelli, B. C. (2020). The complexity of urban eco-evolutionary dynamics. BioScience, 70(9), 772-793. doi:10.1093/biosci/biaa079, Institutional Repository
Altermatt, F., Little, C. J., Mächler, E., Wang, S., Zhang, X., & Blackman, R. C. (2020). Uncovering the complete biodiversity structure in spatial networks: the example of riverine systems. Oikos, 129(5), 607-618. doi:10.1111/oik.06806, Institutional Repository
Alther, R., & Weber, R. (2020). "Wir rechnen mit weiteren Entdeckungen". Pro Natura Magazine (1), 7-8. , Institutional Repository
Alther, R., Bongni, N., Borko, Š., Fišer, C., & Altermatt, F. (2020). Reiche Grundwasserfauna. Pilotstudie fördert Artenvielfalt zutage. Aqua & Gas, 100(7/8), 36-42. , Institutional Repository
Archambeault, S. L., Durston, D. J., Wan, A., El‐Sabaawi, R. W., Matthews, B., & Peichel, C. L. (2020). Phosphorus limitation does not drive loss of bony lateral plates in freshwater stickleback (Gasterosteus aculeatus). Evolution, International Journal of Organic Evolution, 74(9), 2088-2104. doi:10.1111/evo.14044, Institutional Repository
Baggio, M., Chavas, J. ‐P., Di Falco, S., Hertig, A., & Pomati, F. (2020). The effect of anthropogenic and environmental factors in coupled human‐natural systems: evidence from Lake Zürich. Natural Resource Modeling, 33, e12245 (28 pp.). doi:10.1111/nrm.12245, Institutional Repository
Beck, S. V., Räsänen, K., Leblanc, C. A., Skúlason, S., Jónsson, Z. O., & Kristjánsson, B. K. (2020). Differences among families in craniofacial shape at early life-stages of Arctic charr (Salvelinus alpinus). BMC Developmental Biology, 20(1), 21 (15 pp.). doi:10.1186/s12861-020-00226-0, Institutional Repository
Bergström, A. K., Jonsson, A., Isles, P. D. F., Creed, I. F., & Lau, D. C. P. (2020). Changes in nutritional quality and nutrient limitation regimes of phytoplankton in response to declining N deposition in mountain lakes. Aquatic Sciences, 82(2), 31 (16 pp.). doi:10.1007/s00027-020-0697-1, Institutional Repository
Bernhard, G. H., Neale, R. E., Barnes, P. W., Neale, P. J., Zepp, R. G., Wilson, S. R., … White, C. C. (2020). Environmental effects of stratospheric ozone depletion, UV radiation and interactions with climate change: UNEP Environmental Effects Assessment Panel, update 2019. Photochemical and Photobiological Sciences, 19(5), 542-584. doi:10.1039/d0pp90011g, Institutional Repository
Bernhardt, J. R., O'Connor, M. I., Sunday, J. M., & Gonzalez, A. (2020). Life in fluctuating environments. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1814), 20190454 (22 pp.). doi:10.1098/rstb.2019.0454, Institutional Repository
Bernhardt, J. R., Kratina, P., Pereira, A. L., Tamminen, M., Thomas, M. K., & Narwani, A. (2020). The evolution of competitive ability for essential resources. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1798), 20190247 (10 pp.). doi:10.1098/rstb.2019.0247, Institutional Repository
Blackman, R. C., Bruder, A., Burdon, F. J., Convey, P., Funk, W. C., Jähnig, S. C., … Altermatt, F. (2020). A meeting framework for inclusive and sustainable science. Nature Ecology & Evolution, 4, 668-671. doi:10.1038/s41559-020-1190-x, Institutional Repository
Blackman, R. C., Benucci, M., Donnelly, R. C., Hänfling, B., Harper, L. R., Sellers, G. S., & Lawson Handley, L. (2020). Simple, sensitive and species-specific assays for detecting quagga and zebra mussels (Dreissena rostriformis bugensis and D. polymorpha) using environmental DNA. Management of Biological Invasions, 11(2), 218-236. doi:10.3391/mbi.2020.11.2.04, Institutional Repository
Blackman, R. C., Ling, K. K. S., Harper, L. R., Shum, P., Hänfling, B., & Lawson-Handley, L. (2020). Targeted and passive environmental DNA approaches outperform established methods for detection of quagga mussels, Dreissena rostriformis bugensis in flowing water. Ecology and Evolution, 10(23), 13248-13259. doi:10.1002/ece3.6921, Institutional Repository
Blasco-Costa, I., Seppälä, K., Feijen, F., Zajac, N., Klappert, K., & Jokela, J. (2020). A new species of Atriophallophorus Deblock & Rosé, 1964 (Trematoda: Microphallidae) described from in vitro-grown adults and metacercariae from Potamopyrgus antipodarum (Gray, 1843) (Mollusca: Tateidae). Journal of Helminthology, 94, e108 (15 pp.). doi:10.1017/S0022149X19000993, Institutional Repository
Brans, K. I., Govaert, L., & De Meester, L. (2020). Evolutionary dynamics of metacommunities in urbanized landscapes. In M. Szulkin, J. Munshi-South, & A. Charmantier (Eds.), Urban evolutionary biology (pp. 175-196). doi:10.1093/oso/9780198836841.003.0011, Institutional Repository
Brantschen, J., Gygax, S., Mestrot, A., & Frossard, A. (2020). Soil Hg contamination impact on earthworms' gut microbiome. Applied Sciences, 10(7), 2565 (19 pp.). doi:10.3390/app10072565, Institutional Repository
Burdon, F. J., McIntosh, A. R., & Harding, J. S. (2020). Mechanisms of trophic niche compression: evidence from landscape disturbance. Journal of Animal Ecology, 89, 730-744. doi:10.1111/1365-2656.13142, Institutional Repository
Burdon, F. J., Bai, Y., Reyes, M., Tamminen, M., Staudacher, P., Mangold, S., … Stamm, C. (2020). Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater. Global Change Biology, 26(11), 6363-6382. doi:10.1111/gcb.15302, Institutional Repository
Cairns, J., Moerman, F., Fronhofer, E. A., Altermatt, F., & Hiltunen, T. (2020). Evolution in interacting species alters predator life-history traits, behaviour and morphology in experimental microbial communities. Proceedings of the Royal Society B: Biological Sciences, 287(1928), 20200652 (10 pp.). doi:10.1098/rspb.2020.0652, Institutional Repository
Carraro, L., Mächler, E., Wüthrich, R., & Altermatt, F. (2020). Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems. Nature Communications, 11, 3585 (12 pp.). doi:10.1038/s41467-020-17337-8, Institutional Repository
Carraro, L., Bertuzzo, E., Fronhofer, E. A., Furrer, R., Gounand, I., Rinaldo, A., & Altermatt, F. (2020). Generation and application of river network analogues for use in ecology and evolution. Ecology and Evolution, 10(14), 7537-7550. doi:10.1002/ece3.6479, Institutional Repository
Carraro, L., Toffolon, M., Rinaldo, A., & Bertuzzo, E. (2020). SESTET: a spatially‐explicit stream temperature model based on equilibrium temperature. Hydrological Processes, 34, 355-369. doi:10.1002/hyp.13591, Institutional Repository
Chanut, P. C. M., Siebers, A. R., & Robinson, C. T. (2020). Flood disturbance affects macroinvertebrate food chain length in an alluvial river floodplain. Freshwater Biology, 65(3), 490-501. doi:10.1111/fwb.13445, Institutional Repository
Coats, D. W., Choi, J., Jung, J. H., Kim, Y. O., Lu, Y., & Nielsen, L. T. (2020). Mixotrophic scrippsielloid dinoflagellates prey on tintinnid ciliates. Aquatic Ecosystem Health and Management, 23(1), 69-78. doi:10.1080/14634988.2020.1727275, Institutional Repository
Dennis, A. B., Ballesteros, G. I., Robin, S., Schrader, L., Bast, J., Berghöfer, J., … Gadau, J. (2020). Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum. BMC Genomics, 21(1), 376 (27 pp.). doi:10.1186/s12864-020-6764-0, Institutional Repository
Dünner, R. P. (2020). Parasite ping pong - host-parasite coevolution, metapopulation structure and genetic diversity (Doctoral dissertation). doi:10.3929/ethz-b-000443380, Institutional Repository
Erős, T., Comte, L., Filipe, A. F., Ruhi, A., Tedesco, P. A., Brose, U., … Olden, J. D. (2020). Effects of nonnative species on the stability of riverine fish communities. Ecography, 43(8), 1156-1166. doi:10.1111/ecog.04985, Institutional Repository
Felmy, A., Weissert, N., Travis, J., & Jokela, J. (2020). Mate availability determines use of alternative reproductive phenotypes in hermaphrodites. Behavioral Ecology, 31(4), 1003-1016. doi:10.1093/beheco/araa046, Institutional Repository
Gatto, M., Bertuzzo, E., Mari, L., Miccoli, S., Carraro, L., Casagrandi, R., & Rinaldo, A. (2020). Spread and dynamics of the COVID-19 epidemic in Italy: effects of emergency containment measures. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(19), 10484-10491. doi:10.1073/pnas.2004978117, Institutional Repository
Gilarranz, L. J. (2020). Generic emergence of modularity in spatial networks. Scientific Reports, 10(1), 8708 (8 pp.). doi:10.1038/s41598-020-65669-8, Institutional Repository
Gounand, I., Little, C. J., Harvey, E., & Altermatt, F. (2020). Global quantitative synthesis of ecosystem functioning across climatic zones and ecosystem types. Global Ecology and Biogeography, 29(7), 1139-1176. doi:10.1111/geb.13093, Institutional Repository
Guntern, J., Eichler, A., Hagedorn, F., Pellissier, L., Schwikowski, M., Seehausen, O., … Altermatt, F. (2020). Übermässige Stickstoff- und Phosphoreinträge schädigen Biodiversität, Wald und Gewässer. Swiss Academies factsheets: Vol. 15/8. doi:10.5281/zenodo.4269631, Institutional Repository
Hafer-Hahmann, N., & Vorburger, C. (2020). Parasitoids as drivers of symbiont diversity in an insect host. Ecology Letters, 23(8), 1232-1241. doi:10.1111/ele.13526, Institutional Repository
Haltiner, L., Hänggi, C., Spaak, P., & Dennis, S. R. (2020). Sex in crowded places: population density regulates reproductive strategy. Hydrobiologia, 847, 1727-1738. doi:10.1007/s10750-019-04143-7, Institutional Repository
Harvey, E., Gounand, I., Fronhofer, E. A., & Altermatt, F. (2020). Metaecosystem dynamics drive community composition in experimental, multi-layered spatial networks. Oikos, 129(3), 402-412. doi:10.1111/oik.07037, Institutional Repository
Held, J., Lorimer, T., Pomati, F., Stoop, R., & Albert, C. (2020). Second-order phase transition in phytoplankton trait dynamics. Chaos: An Interdisciplinary Journal of Nonlinear Science, 30(5), 053109 (9 pp.). doi:10.1063/1.5141755, Institutional Repository
Henry, Y., Overgaard, J., & Colinet, H. (2020). Dietary nutrient balance shapes phenotypic traits of Drosophila melanogaster in interaction with gut microbiota. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 241, 110626 (10 pp.). doi:10.1016/j.cbpa.2019.110626, Institutional Repository
Henry, Y., Tarapacki, P., & Colinet, H. (2020). Larval density affects phenotype and surrounding bacterial community without altering gut microbiota in Drosophila melanogaster. FEMS Microbiology Ecology, 96(4), fiaa055 (11 pp.). doi:10.1093/femsec/fiaa055, Institutional Repository
Isles, P. D. F., Jonsson, A., Creed, I. F., & Bergström, A. K. (2020). Does browning affect the identity of limiting nutrients in lakes?. Aquatic Sciences, 82(2), 45 (14 pp.). doi:10.1007/s00027-020-00718-y, Institutional Repository
Isles, P. D. F. (2020). The misuse of ratios in ecological stoichiometry. Ecology, 101(11), e03153 (7 pp.). doi:10.1002/ecy.3153, Institutional Repository
Jacquet, C., Gounand, I., & Altermatt, F. (2020). How pulse disturbances shape size-abundance pyramids. Ecology Letters, 23(6), 1014-1023. doi:10.1111/ele.13508, Institutional Repository
Jacquet, C., & Altermatt, F. (2020). The ghost of disturbance past: long-term effects of pulse disturbances on community biomass and composition. Proceedings of the Royal Society B: Biological Sciences, 287(1930), 20200678 (8 pp.). doi:10.1098/rspb.2020.0678, Institutional Repository
Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., … Chase, J. M. (2020). A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data, 7(1), 6 (15 pp.). doi:10.1038/s41597-019-0344-7, Institutional Repository
Johnson, D. R., & Pomati, F. (2020). A brief guide for the measurement and interpretation of microbial functional diversity. Environmental Microbiology, 22(8), 3039-3048. doi:10.1111/1462-2920.15147, Institutional Repository
Leal, M. C., Anaya-Rojas, J. M., Munro, M. H. G., Blunt, J. W., Melian, C. J., Calado, R., & Lürig, M. D. (2020). Fifty years of capacity building in the search for new marine natural products. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(39), 24165-24172. doi:10.1073/pnas.2007610117, Institutional Repository
Lewington-Pearce, L., Parker, B., Narwani, A., Nielsen, J. M., & Kratina, P. (2020). Diversity and temperature indirectly reduce CO2 concentrations in experimental freshwater communities. Oecologia, 192, 515-527. doi:10.1007/s00442-020-04593-0, Institutional Repository
Li, F., Altermatt, F., Yang, J., An, S., Li, A., & Zhang, X. (2020). Human activities' fingerprint on multitrophic biodiversity and ecosystem functions across a major river catchment in China. Global Change Biology, 26(12), 6867-6879. doi:10.1111/gcb.15357, Institutional Repository
Little, C. J., Fronhofer, E. A., & Altermatt, F. (2020). Nonlinear effects of intraspecific competition alter landscape-wide scaling up of ecosystem function. American Naturalist, 195(3), 432-444. doi:10.1086/707018, Institutional Repository
Lu, Y., Ocaña-Pallarès, E., López-Escardó, D., Dennis, S. R., Monaghan, M. T., Ruiz-Trillo, I., … Wolinska, J. (2020). Revisiting the phylogenetic position of Caullerya mesnili (Ichthyosporea), a common Daphnia parasite, based on 22 protein-coding genes. Molecular Phylogenetics and Evolution, 151, 106891 (8 pp.). doi:10.1016/j.ympev.2020.106891, Institutional Repository
Lüthi, M. N., Vorburger, C., & Dennis, A. B. (2020). A novel RNA virus in the parasitoid wasp Lysiphlebus fabarum: genomic structure, prevalence, and transmission. Viruses, 12(1), 59 (19 pp.). doi:10.3390/v12010059, Institutional Repository
Mansfeldt, C., Deiner, K., Mächler, E., Fenner, K., Eggen, R. I. L., Stamm, C., … Altermatt, F. (2020). Microbial community shifts in streams receiving treated wastewater effluent. Science of the Total Environment, 709, 135727 (12 pp.). doi:10.1016/j.scitotenv.2019.135727, Institutional Repository
Manzi, F., Agha, R., Lu, Y., Ben-Ami, F., & Wolinska, J. (2020). Temperature and host diet jointly influence the outcome of infection in a Daphnia-fungal parasite system. Freshwater Biology, 65(4), 757-767. doi:10.1111/fwb.13464, Institutional Repository
Matthews, B., Jokela, J., Narwani, A., Räsänen, K., Pomati, F., Altermatt, F., … Vorburger, C. (2020). On biological evolution and environmental solutions. Science of the Total Environment, 724, 138194 (7 pp.). doi:10.1016/j.scitotenv.2020.138194, Institutional Repository
McLean, A. H. C., Hrček, J., Parker, B. J., Mathé-Hubert, H., Kaech, H., Paine, C., & Godfray, H. C. J. (2020). Multiple phenotypes conferred by a single insect symbiont are independent. Proceedings of the Royal Society B: Biological Sciences, 287(1929), 20200562 (9 pp.). doi:10.1098/rspb.2020.0562, Institutional Repository
Moerman, F., Arquint, A., Merkli, S., Wagner, A., Altermatt, F., & Fronhofer, E. A. (2020). Evolution under pH stress and high population densities leads to increased density-dependent fitness in the protist Tetrahymena thermophila. Evolution, International Journal of Organic Evolution, 74(3), 573-586. doi:10.1111/evo.13921, Institutional Repository
Moerman, F., Fronhofer, E. A., Wagner, A., & Altermatt, F. (2020). Gene swamping alters evolution during range expansions in the protist Tetrahymena thermophila. Biology Letters, 16(6), 20200244 (7 pp.). doi:10.1098/rsbl.2020.0244, Institutional Repository
Mächler, E. (2020). Environmental DNA for rivers: from degradation processes to diversity analysis and monitoring (Doctoral dissertation). Universität Zürich, Zürich, 272 p. , Institutional Repository
Niggli, U., Altermatt, F., Finger, R., Lehmann, B., Schindler, M., Studer, B., … Waibel, P. (2020). Food for people and planet. In P. Edwards & G. Wuelser (Eds.), Swiss Academies reports: Vol. 15(5). Priority themes for Swiss sustainability research (pp. 20-23). Bern: Swiss Academies of Alerts and Sciences (a+). , Institutional Repository
Paillex, A., Siebers, A. R., Ebi, C., Mesman, J., & Robinson, C. T. (2020). High stream intermittency in an alpine fluvial network: Val Roseg, Switzerland. Limnology and Oceanography, 65, 557-568. doi:10.1002/lno.11324, Institutional Repository
Pastor, A., Hernández-del Amo, E., Giménez-Grau, P., Fillol, M., Pereda, O., Flores, L., … Catalán, N. (2020). Early-career coordinated distributed experiments: empowerment through collaboration. Frontiers in Education, 5, 13 (7 pp.). doi:10.3389/feduc.2020.00013, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Anwendung von eDNA-Methoden in biologischen Untersuchungen und bei der biologischen Bewertung von aquatischen Ökosystemen. Richtlinien. Umwelt-Wissen: Vol. 2010. Retrieved from https://www.bafu.admin.ch/uw-2010-d, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Environmental DNA applications in biomonitoring and bio-assessment of aquatic ecosystems. Guidelines. Environmental studies: Vol. 2010. Retrieved from https://www.bafu.admin.ch/UW-2010-E, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., & Altermatt, F. (2020). Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology, 29(22), 4258-4264. doi:10.1111/mec.15643, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Utilisations de l'ADN environnemental pour la surveil-lance et l'évaluation biologiques des écosystèmes aquatiques. Directives. Connais-sance de l'environnement: Vol. 2010. Retrieved from https://www.bafu.admin.ch/bafu/fr/home/themes/eaux/publications/publications-eaux/utilisations-de-l-adn-environnemental-pour-la-surveillance.html, Institutional Repository
Piano, E., Souffreau, C., Merckx, T., Baardsen, L. F., Backeljau, T., Bonte, D., … Hendrickx, F. (2020). Urbanization drives cross-taxon declines in abundance and diversity at multiple spatial scales. Global Change Biology, 26(3), 1196-1211. doi:10.1111/gcb.14934, Institutional Repository
Pilla, R. M., Williamson, C. E., Adamovich, B. V., Adrian, R., Anneville, O., Chandra, S., … Zadereev, E. (2020). Deeper waters are changing less consistently than surface waters in a global analysis of 102 lakes. Scientific Reports, 10, 20514 (15 pp.). doi:10.1038/s41598-020-76873-x, Institutional Repository
Pomati, F., Shurin, J. B., Andersen, K. H., Tellenbach, C., & Barton, A. D. (2020). Interacting temperature, nutrients and zooplankton grazing control phytoplankton size-abundance relationships in eight Swiss Lakes. Frontiers in Microbiology, 10, 3155 (17 pp.). doi:10.3389/fmicb.2019.03155, Institutional Repository
Rat, M., Mathe-Hubert, H., McKechnie, A. E., Sueur, C., & Cunningham, S. J. (2020). Extreme and variable environmental temperatures are linked to reduction of social network cohesiveness in a highly social passerine. Oikos, 129(11), 1597-1610. doi:10.1111/oik.07463, Institutional Repository
Robinson, C. T., Schweizer, P., Larsen, A., Schubert, C. J., & Siebers, A. R. (2020). Beaver effects on macroinvertebrate assemblages in two streams with contrasting morphology. Science of the Total Environment, 722, 137899 (9 pp.). doi:10.1016/j.scitotenv.2020.137899, Institutional Repository
Robinson, C. T., Hediger, I., Li, J., & Rosenthal, A. (2020). Towards integrating art and freshwater science. Freshwater Science, 39(2), 347-348. doi:10.1086/708948, Institutional Repository
Rossbacher, S., & Vorburger, C. (2020). Prior adaptation of parasitoids improves biological control of symbiont-protected pests. Evolutionary Applications, 13(8), 1868-1876. doi:10.1111/eva.12934, Institutional Repository
Russo, S., Lürig, M., Hao, W., Matthews, B., & Villez, K. (2020). Active learning for anomaly detection in environmental data. Environmental Modelling and Software, 134, 104869 (11 pp.). doi:10.1016/j.envsoft.2020.104869, Institutional Repository
Sarremejane, R., Cid, N., Stubbington, R., Datry, T., Alp, M., Cañedo-Argüelles, M., … Bonada, N. (2020). DISPERSE, a trait database to assess the dispersal potential of European aquatic macroinvertebrates. Scientific Data, 7(1), 386 (9 pp.). doi:10.1038/s41597-020-00732-7, Institutional Repository
Seppälä, O., Lively, C. M., & Jokela, J. (2020). Coinfecting parasites can modify fluctuating selection dynamics in host-parasite coevolution. Ecology and Evolution, 10(18), 9600-9612. doi:10.1002/ece3.6373, Institutional Repository
Sieber, N. M. (2020). Detection of aquatic wildlife pathogens from eDNA in water samples. Validation and application in Switzerland (Doctoral dissertation). doi:10.3929/ethz-b-000469792, Institutional Repository
Sieber, N., Hartikainen, H., & Vorburger, C. (2020). Validation of an eDNA-based method for the detection of wildlife pathogens in water. Diseases of Aquatic Organisms, 141, 171-184. doi:10.3354/dao03524, Institutional Repository
Siebers, A. R., Paillex, A., Misteli, B., & Robinson, C. T. (2020). Effects of an experimental increase in flow intermittency on an alpine stream. Hydrobiologia, 847, 3453-3470. doi:10.1007/s10750-020-04350-7, Institutional Repository
Stephenson, J. F., Stevens, M., Troscianko, J., & Jokela, J. (2020). The size, symmetry, and color saturation of a male guppy's ornaments forecast his resistance to parasites. American Naturalist, 196(5), 597-608. doi:10.1086/711033, Institutional Repository
Stockwell, J. D., Doubek, J. P., Adrian, R., Anneville, O., Carey, C. C., Carvalho, L., … Wilson, H. L. (2020). Storm impacts on phytoplankton community dynamics in lakes. Global Change Biology, 26(5), 2756-2784. doi:10.1111/gcb.15033, Institutional Repository
Strepparava, N., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., Wahli, T., Segner, H., & Bailey, C. (2020). Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout (Salmo trutta). Transboundary and Emerging Diseases, 67(6), 2642-2652. doi:10.1111/tbed.13615, Institutional Repository
Stähly, S., Franca, M. J., Robinson, C. T., & Schleiss, A. J. (2020). Erosion, transport and deposition of a sediment replenishment under flood conditions. Earth Surface Processes and Landforms, 45(13), 3354-3367. doi:10.1002/esp.4970, Institutional Repository
Tabi, A., Pennekamp, F., Altermatt, F., Alther, R., Fronhofer, E. A., Horgan, K., … Saavedra, S. (2020). Species multidimensional effects explain idiosyncratic responses of communities to environmental change. Nature Ecology & Evolution, 4, 1036-1043. doi:10.1038/s41559-020-1206-6, Institutional Repository
Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., … de Vries, F. T. (2020). Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications, 11, 1351 (12 pp.). doi:10.1038/s41467-020-15014-4, Institutional Repository
Weber, C., Sprecher, L., Åberg, U., Thomas, G., Baumgartner, S., & Haertel-Borer, S. (2020). Wirkungskontrollen mit Wirkung: Gemeinsam lernen für Revitalisierungen. Wasser, Energie, Luft, 112(1), 41-47. , Institutional Repository

2020

Alberti, M., Palkovacs, E. P., Des Roches, S., De Meester, L., Brans, K. I., Govaert, L., … Verrelli, B. C. (2020). The complexity of urban eco-evolutionary dynamics. BioScience, 70(9), 772-793. doi:10.1093/biosci/biaa079, Institutional Repository
Altermatt, F., Little, C. J., Mächler, E., Wang, S., Zhang, X., & Blackman, R. C. (2020). Uncovering the complete biodiversity structure in spatial networks: the example of riverine systems. Oikos, 129(5), 607-618. doi:10.1111/oik.06806, Institutional Repository
Alther, R., & Weber, R. (2020). "Wir rechnen mit weiteren Entdeckungen". Pro Natura Magazine (1), 7-8. , Institutional Repository
Alther, R., Bongni, N., Borko, Š., Fišer, C., & Altermatt, F. (2020). Reiche Grundwasserfauna. Pilotstudie fördert Artenvielfalt zutage. Aqua & Gas, 100(7/8), 36-42. , Institutional Repository
Archambeault, S. L., Durston, D. J., Wan, A., El‐Sabaawi, R. W., Matthews, B., & Peichel, C. L. (2020). Phosphorus limitation does not drive loss of bony lateral plates in freshwater stickleback (Gasterosteus aculeatus). Evolution, International Journal of Organic Evolution, 74(9), 2088-2104. doi:10.1111/evo.14044, Institutional Repository
Baggio, M., Chavas, J. ‐P., Di Falco, S., Hertig, A., & Pomati, F. (2020). The effect of anthropogenic and environmental factors in coupled human‐natural systems: evidence from Lake Zürich. Natural Resource Modeling, 33, e12245 (28 pp.). doi:10.1111/nrm.12245, Institutional Repository
Beck, S. V., Räsänen, K., Leblanc, C. A., Skúlason, S., Jónsson, Z. O., & Kristjánsson, B. K. (2020). Differences among families in craniofacial shape at early life-stages of Arctic charr (Salvelinus alpinus). BMC Developmental Biology, 20(1), 21 (15 pp.). doi:10.1186/s12861-020-00226-0, Institutional Repository
Bergström, A. K., Jonsson, A., Isles, P. D. F., Creed, I. F., & Lau, D. C. P. (2020). Changes in nutritional quality and nutrient limitation regimes of phytoplankton in response to declining N deposition in mountain lakes. Aquatic Sciences, 82(2), 31 (16 pp.). doi:10.1007/s00027-020-0697-1, Institutional Repository
Bernhard, G. H., Neale, R. E., Barnes, P. W., Neale, P. J., Zepp, R. G., Wilson, S. R., … White, C. C. (2020). Environmental effects of stratospheric ozone depletion, UV radiation and interactions with climate change: UNEP Environmental Effects Assessment Panel, update 2019. Photochemical and Photobiological Sciences, 19(5), 542-584. doi:10.1039/d0pp90011g, Institutional Repository
Bernhardt, J. R., O'Connor, M. I., Sunday, J. M., & Gonzalez, A. (2020). Life in fluctuating environments. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1814), 20190454 (22 pp.). doi:10.1098/rstb.2019.0454, Institutional Repository
Bernhardt, J. R., Kratina, P., Pereira, A. L., Tamminen, M., Thomas, M. K., & Narwani, A. (2020). The evolution of competitive ability for essential resources. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1798), 20190247 (10 pp.). doi:10.1098/rstb.2019.0247, Institutional Repository
Blackman, R. C., Bruder, A., Burdon, F. J., Convey, P., Funk, W. C., Jähnig, S. C., … Altermatt, F. (2020). A meeting framework for inclusive and sustainable science. Nature Ecology & Evolution, 4, 668-671. doi:10.1038/s41559-020-1190-x, Institutional Repository
Blackman, R. C., Benucci, M., Donnelly, R. C., Hänfling, B., Harper, L. R., Sellers, G. S., & Lawson Handley, L. (2020). Simple, sensitive and species-specific assays for detecting quagga and zebra mussels (Dreissena rostriformis bugensis and D. polymorpha) using environmental DNA. Management of Biological Invasions, 11(2), 218-236. doi:10.3391/mbi.2020.11.2.04, Institutional Repository
Blackman, R. C., Ling, K. K. S., Harper, L. R., Shum, P., Hänfling, B., & Lawson-Handley, L. (2020). Targeted and passive environmental DNA approaches outperform established methods for detection of quagga mussels, Dreissena rostriformis bugensis in flowing water. Ecology and Evolution, 10(23), 13248-13259. doi:10.1002/ece3.6921, Institutional Repository
Blasco-Costa, I., Seppälä, K., Feijen, F., Zajac, N., Klappert, K., & Jokela, J. (2020). A new species of Atriophallophorus Deblock & Rosé, 1964 (Trematoda: Microphallidae) described from in vitro-grown adults and metacercariae from Potamopyrgus antipodarum (Gray, 1843) (Mollusca: Tateidae). Journal of Helminthology, 94, e108 (15 pp.). doi:10.1017/S0022149X19000993, Institutional Repository
Brans, K. I., Govaert, L., & De Meester, L. (2020). Evolutionary dynamics of metacommunities in urbanized landscapes. In M. Szulkin, J. Munshi-South, & A. Charmantier (Eds.), Urban evolutionary biology (pp. 175-196). doi:10.1093/oso/9780198836841.003.0011, Institutional Repository
Brantschen, J., Gygax, S., Mestrot, A., & Frossard, A. (2020). Soil Hg contamination impact on earthworms' gut microbiome. Applied Sciences, 10(7), 2565 (19 pp.). doi:10.3390/app10072565, Institutional Repository
Burdon, F. J., McIntosh, A. R., & Harding, J. S. (2020). Mechanisms of trophic niche compression: evidence from landscape disturbance. Journal of Animal Ecology, 89, 730-744. doi:10.1111/1365-2656.13142, Institutional Repository
Burdon, F. J., Bai, Y., Reyes, M., Tamminen, M., Staudacher, P., Mangold, S., … Stamm, C. (2020). Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater. Global Change Biology, 26(11), 6363-6382. doi:10.1111/gcb.15302, Institutional Repository
Cairns, J., Moerman, F., Fronhofer, E. A., Altermatt, F., & Hiltunen, T. (2020). Evolution in interacting species alters predator life-history traits, behaviour and morphology in experimental microbial communities. Proceedings of the Royal Society B: Biological Sciences, 287(1928), 20200652 (10 pp.). doi:10.1098/rspb.2020.0652, Institutional Repository
Carraro, L., Mächler, E., Wüthrich, R., & Altermatt, F. (2020). Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems. Nature Communications, 11, 3585 (12 pp.). doi:10.1038/s41467-020-17337-8, Institutional Repository
Carraro, L., Bertuzzo, E., Fronhofer, E. A., Furrer, R., Gounand, I., Rinaldo, A., & Altermatt, F. (2020). Generation and application of river network analogues for use in ecology and evolution. Ecology and Evolution, 10(14), 7537-7550. doi:10.1002/ece3.6479, Institutional Repository
Carraro, L., Toffolon, M., Rinaldo, A., & Bertuzzo, E. (2020). SESTET: a spatially‐explicit stream temperature model based on equilibrium temperature. Hydrological Processes, 34, 355-369. doi:10.1002/hyp.13591, Institutional Repository
Chanut, P. C. M., Siebers, A. R., & Robinson, C. T. (2020). Flood disturbance affects macroinvertebrate food chain length in an alluvial river floodplain. Freshwater Biology, 65(3), 490-501. doi:10.1111/fwb.13445, Institutional Repository
Coats, D. W., Choi, J., Jung, J. H., Kim, Y. O., Lu, Y., & Nielsen, L. T. (2020). Mixotrophic scrippsielloid dinoflagellates prey on tintinnid ciliates. Aquatic Ecosystem Health and Management, 23(1), 69-78. doi:10.1080/14634988.2020.1727275, Institutional Repository
Dennis, A. B., Ballesteros, G. I., Robin, S., Schrader, L., Bast, J., Berghöfer, J., … Gadau, J. (2020). Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum. BMC Genomics, 21(1), 376 (27 pp.). doi:10.1186/s12864-020-6764-0, Institutional Repository
Dünner, R. P. (2020). Parasite ping pong - host-parasite coevolution, metapopulation structure and genetic diversity (Doctoral dissertation). doi:10.3929/ethz-b-000443380, Institutional Repository
Erős, T., Comte, L., Filipe, A. F., Ruhi, A., Tedesco, P. A., Brose, U., … Olden, J. D. (2020). Effects of nonnative species on the stability of riverine fish communities. Ecography, 43(8), 1156-1166. doi:10.1111/ecog.04985, Institutional Repository
Felmy, A., Weissert, N., Travis, J., & Jokela, J. (2020). Mate availability determines use of alternative reproductive phenotypes in hermaphrodites. Behavioral Ecology, 31(4), 1003-1016. doi:10.1093/beheco/araa046, Institutional Repository
Gatto, M., Bertuzzo, E., Mari, L., Miccoli, S., Carraro, L., Casagrandi, R., & Rinaldo, A. (2020). Spread and dynamics of the COVID-19 epidemic in Italy: effects of emergency containment measures. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(19), 10484-10491. doi:10.1073/pnas.2004978117, Institutional Repository
Gilarranz, L. J. (2020). Generic emergence of modularity in spatial networks. Scientific Reports, 10(1), 8708 (8 pp.). doi:10.1038/s41598-020-65669-8, Institutional Repository
Gounand, I., Little, C. J., Harvey, E., & Altermatt, F. (2020). Global quantitative synthesis of ecosystem functioning across climatic zones and ecosystem types. Global Ecology and Biogeography, 29(7), 1139-1176. doi:10.1111/geb.13093, Institutional Repository
Guntern, J., Eichler, A., Hagedorn, F., Pellissier, L., Schwikowski, M., Seehausen, O., … Altermatt, F. (2020). Übermässige Stickstoff- und Phosphoreinträge schädigen Biodiversität, Wald und Gewässer. Swiss Academies factsheets: Vol. 15/8. doi:10.5281/zenodo.4269631, Institutional Repository
Hafer-Hahmann, N., & Vorburger, C. (2020). Parasitoids as drivers of symbiont diversity in an insect host. Ecology Letters, 23(8), 1232-1241. doi:10.1111/ele.13526, Institutional Repository
Haltiner, L., Hänggi, C., Spaak, P., & Dennis, S. R. (2020). Sex in crowded places: population density regulates reproductive strategy. Hydrobiologia, 847, 1727-1738. doi:10.1007/s10750-019-04143-7, Institutional Repository
Harvey, E., Gounand, I., Fronhofer, E. A., & Altermatt, F. (2020). Metaecosystem dynamics drive community composition in experimental, multi-layered spatial networks. Oikos, 129(3), 402-412. doi:10.1111/oik.07037, Institutional Repository
Held, J., Lorimer, T., Pomati, F., Stoop, R., & Albert, C. (2020). Second-order phase transition in phytoplankton trait dynamics. Chaos: An Interdisciplinary Journal of Nonlinear Science, 30(5), 053109 (9 pp.). doi:10.1063/1.5141755, Institutional Repository
Henry, Y., Overgaard, J., & Colinet, H. (2020). Dietary nutrient balance shapes phenotypic traits of Drosophila melanogaster in interaction with gut microbiota. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 241, 110626 (10 pp.). doi:10.1016/j.cbpa.2019.110626, Institutional Repository
Henry, Y., Tarapacki, P., & Colinet, H. (2020). Larval density affects phenotype and surrounding bacterial community without altering gut microbiota in Drosophila melanogaster. FEMS Microbiology Ecology, 96(4), fiaa055 (11 pp.). doi:10.1093/femsec/fiaa055, Institutional Repository
Isles, P. D. F., Jonsson, A., Creed, I. F., & Bergström, A. K. (2020). Does browning affect the identity of limiting nutrients in lakes?. Aquatic Sciences, 82(2), 45 (14 pp.). doi:10.1007/s00027-020-00718-y, Institutional Repository
Isles, P. D. F. (2020). The misuse of ratios in ecological stoichiometry. Ecology, 101(11), e03153 (7 pp.). doi:10.1002/ecy.3153, Institutional Repository
Jacquet, C., Gounand, I., & Altermatt, F. (2020). How pulse disturbances shape size-abundance pyramids. Ecology Letters, 23(6), 1014-1023. doi:10.1111/ele.13508, Institutional Repository
Jacquet, C., & Altermatt, F. (2020). The ghost of disturbance past: long-term effects of pulse disturbances on community biomass and composition. Proceedings of the Royal Society B: Biological Sciences, 287(1930), 20200678 (8 pp.). doi:10.1098/rspb.2020.0678, Institutional Repository
Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., … Chase, J. M. (2020). A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data, 7(1), 6 (15 pp.). doi:10.1038/s41597-019-0344-7, Institutional Repository
Johnson, D. R., & Pomati, F. (2020). A brief guide for the measurement and interpretation of microbial functional diversity. Environmental Microbiology, 22(8), 3039-3048. doi:10.1111/1462-2920.15147, Institutional Repository
Leal, M. C., Anaya-Rojas, J. M., Munro, M. H. G., Blunt, J. W., Melian, C. J., Calado, R., & Lürig, M. D. (2020). Fifty years of capacity building in the search for new marine natural products. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117(39), 24165-24172. doi:10.1073/pnas.2007610117, Institutional Repository
Lewington-Pearce, L., Parker, B., Narwani, A., Nielsen, J. M., & Kratina, P. (2020). Diversity and temperature indirectly reduce CO2 concentrations in experimental freshwater communities. Oecologia, 192, 515-527. doi:10.1007/s00442-020-04593-0, Institutional Repository
Li, F., Altermatt, F., Yang, J., An, S., Li, A., & Zhang, X. (2020). Human activities' fingerprint on multitrophic biodiversity and ecosystem functions across a major river catchment in China. Global Change Biology, 26(12), 6867-6879. doi:10.1111/gcb.15357, Institutional Repository
Little, C. J., Fronhofer, E. A., & Altermatt, F. (2020). Nonlinear effects of intraspecific competition alter landscape-wide scaling up of ecosystem function. American Naturalist, 195(3), 432-444. doi:10.1086/707018, Institutional Repository
Lu, Y., Ocaña-Pallarès, E., López-Escardó, D., Dennis, S. R., Monaghan, M. T., Ruiz-Trillo, I., … Wolinska, J. (2020). Revisiting the phylogenetic position of Caullerya mesnili (Ichthyosporea), a common Daphnia parasite, based on 22 protein-coding genes. Molecular Phylogenetics and Evolution, 151, 106891 (8 pp.). doi:10.1016/j.ympev.2020.106891, Institutional Repository
Lüthi, M. N., Vorburger, C., & Dennis, A. B. (2020). A novel RNA virus in the parasitoid wasp Lysiphlebus fabarum: genomic structure, prevalence, and transmission. Viruses, 12(1), 59 (19 pp.). doi:10.3390/v12010059, Institutional Repository
Mansfeldt, C., Deiner, K., Mächler, E., Fenner, K., Eggen, R. I. L., Stamm, C., … Altermatt, F. (2020). Microbial community shifts in streams receiving treated wastewater effluent. Science of the Total Environment, 709, 135727 (12 pp.). doi:10.1016/j.scitotenv.2019.135727, Institutional Repository
Manzi, F., Agha, R., Lu, Y., Ben-Ami, F., & Wolinska, J. (2020). Temperature and host diet jointly influence the outcome of infection in a Daphnia-fungal parasite system. Freshwater Biology, 65(4), 757-767. doi:10.1111/fwb.13464, Institutional Repository
Matthews, B., Jokela, J., Narwani, A., Räsänen, K., Pomati, F., Altermatt, F., … Vorburger, C. (2020). On biological evolution and environmental solutions. Science of the Total Environment, 724, 138194 (7 pp.). doi:10.1016/j.scitotenv.2020.138194, Institutional Repository
McLean, A. H. C., Hrček, J., Parker, B. J., Mathé-Hubert, H., Kaech, H., Paine, C., & Godfray, H. C. J. (2020). Multiple phenotypes conferred by a single insect symbiont are independent. Proceedings of the Royal Society B: Biological Sciences, 287(1929), 20200562 (9 pp.). doi:10.1098/rspb.2020.0562, Institutional Repository
Moerman, F., Arquint, A., Merkli, S., Wagner, A., Altermatt, F., & Fronhofer, E. A. (2020). Evolution under pH stress and high population densities leads to increased density-dependent fitness in the protist Tetrahymena thermophila. Evolution, International Journal of Organic Evolution, 74(3), 573-586. doi:10.1111/evo.13921, Institutional Repository
Moerman, F., Fronhofer, E. A., Wagner, A., & Altermatt, F. (2020). Gene swamping alters evolution during range expansions in the protist Tetrahymena thermophila. Biology Letters, 16(6), 20200244 (7 pp.). doi:10.1098/rsbl.2020.0244, Institutional Repository
Mächler, E. (2020). Environmental DNA for rivers: from degradation processes to diversity analysis and monitoring (Doctoral dissertation). Universität Zürich, Zürich, 272 p. , Institutional Repository
Niggli, U., Altermatt, F., Finger, R., Lehmann, B., Schindler, M., Studer, B., … Waibel, P. (2020). Food for people and planet. In P. Edwards & G. Wuelser (Eds.), Swiss Academies reports: Vol. 15(5). Priority themes for Swiss sustainability research (pp. 20-23). Bern: Swiss Academies of Alerts and Sciences (a+). , Institutional Repository
Paillex, A., Siebers, A. R., Ebi, C., Mesman, J., & Robinson, C. T. (2020). High stream intermittency in an alpine fluvial network: Val Roseg, Switzerland. Limnology and Oceanography, 65, 557-568. doi:10.1002/lno.11324, Institutional Repository
Pastor, A., Hernández-del Amo, E., Giménez-Grau, P., Fillol, M., Pereda, O., Flores, L., … Catalán, N. (2020). Early-career coordinated distributed experiments: empowerment through collaboration. Frontiers in Education, 5, 13 (7 pp.). doi:10.3389/feduc.2020.00013, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Anwendung von eDNA-Methoden in biologischen Untersuchungen und bei der biologischen Bewertung von aquatischen Ökosystemen. Richtlinien. Umwelt-Wissen: Vol. 2010. Retrieved from https://www.bafu.admin.ch/uw-2010-d, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Environmental DNA applications in biomonitoring and bio-assessment of aquatic ecosystems. Guidelines. Environmental studies: Vol. 2010. Retrieved from https://www.bafu.admin.ch/UW-2010-E, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., & Altermatt, F. (2020). Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology, 29(22), 4258-4264. doi:10.1111/mec.15643, Institutional Repository
Pawlowski, J., Apothéloz-Perret-Gentil, L., Mächler, E., & Altermatt, F. (2020). Utilisations de l'ADN environnemental pour la surveil-lance et l'évaluation biologiques des écosystèmes aquatiques. Directives. Connais-sance de l'environnement: Vol. 2010. Retrieved from https://www.bafu.admin.ch/bafu/fr/home/themes/eaux/publications/publications-eaux/utilisations-de-l-adn-environnemental-pour-la-surveillance.html, Institutional Repository
Piano, E., Souffreau, C., Merckx, T., Baardsen, L. F., Backeljau, T., Bonte, D., … Hendrickx, F. (2020). Urbanization drives cross-taxon declines in abundance and diversity at multiple spatial scales. Global Change Biology, 26(3), 1196-1211. doi:10.1111/gcb.14934, Institutional Repository
Pilla, R. M., Williamson, C. E., Adamovich, B. V., Adrian, R., Anneville, O., Chandra, S., … Zadereev, E. (2020). Deeper waters are changing less consistently than surface waters in a global analysis of 102 lakes. Scientific Reports, 10, 20514 (15 pp.). doi:10.1038/s41598-020-76873-x, Institutional Repository
Pomati, F., Shurin, J. B., Andersen, K. H., Tellenbach, C., & Barton, A. D. (2020). Interacting temperature, nutrients and zooplankton grazing control phytoplankton size-abundance relationships in eight Swiss Lakes. Frontiers in Microbiology, 10, 3155 (17 pp.). doi:10.3389/fmicb.2019.03155, Institutional Repository
Rat, M., Mathe-Hubert, H., McKechnie, A. E., Sueur, C., & Cunningham, S. J. (2020). Extreme and variable environmental temperatures are linked to reduction of social network cohesiveness in a highly social passerine. Oikos, 129(11), 1597-1610. doi:10.1111/oik.07463, Institutional Repository
Robinson, C. T., Schweizer, P., Larsen, A., Schubert, C. J., & Siebers, A. R. (2020). Beaver effects on macroinvertebrate assemblages in two streams with contrasting morphology. Science of the Total Environment, 722, 137899 (9 pp.). doi:10.1016/j.scitotenv.2020.137899, Institutional Repository
Robinson, C. T., Hediger, I., Li, J., & Rosenthal, A. (2020). Towards integrating art and freshwater science. Freshwater Science, 39(2), 347-348. doi:10.1086/708948, Institutional Repository
Rossbacher, S., & Vorburger, C. (2020). Prior adaptation of parasitoids improves biological control of symbiont-protected pests. Evolutionary Applications, 13(8), 1868-1876. doi:10.1111/eva.12934, Institutional Repository
Russo, S., Lürig, M., Hao, W., Matthews, B., & Villez, K. (2020). Active learning for anomaly detection in environmental data. Environmental Modelling and Software, 134, 104869 (11 pp.). doi:10.1016/j.envsoft.2020.104869, Institutional Repository
Sarremejane, R., Cid, N., Stubbington, R., Datry, T., Alp, M., Cañedo-Argüelles, M., … Bonada, N. (2020). DISPERSE, a trait database to assess the dispersal potential of European aquatic macroinvertebrates. Scientific Data, 7(1), 386 (9 pp.). doi:10.1038/s41597-020-00732-7, Institutional Repository
Seppälä, O., Lively, C. M., & Jokela, J. (2020). Coinfecting parasites can modify fluctuating selection dynamics in host-parasite coevolution. Ecology and Evolution, 10(18), 9600-9612. doi:10.1002/ece3.6373, Institutional Repository
Sieber, N. M. (2020). Detection of aquatic wildlife pathogens from eDNA in water samples. Validation and application in Switzerland (Doctoral dissertation). doi:10.3929/ethz-b-000469792, Institutional Repository
Sieber, N., Hartikainen, H., & Vorburger, C. (2020). Validation of an eDNA-based method for the detection of wildlife pathogens in water. Diseases of Aquatic Organisms, 141, 171-184. doi:10.3354/dao03524, Institutional Repository
Siebers, A. R., Paillex, A., Misteli, B., & Robinson, C. T. (2020). Effects of an experimental increase in flow intermittency on an alpine stream. Hydrobiologia, 847, 3453-3470. doi:10.1007/s10750-020-04350-7, Institutional Repository
Stephenson, J. F., Stevens, M., Troscianko, J., & Jokela, J. (2020). The size, symmetry, and color saturation of a male guppy's ornaments forecast his resistance to parasites. American Naturalist, 196(5), 597-608. doi:10.1086/711033, Institutional Repository
Stockwell, J. D., Doubek, J. P., Adrian, R., Anneville, O., Carey, C. C., Carvalho, L., … Wilson, H. L. (2020). Storm impacts on phytoplankton community dynamics in lakes. Global Change Biology, 26(5), 2756-2784. doi:10.1111/gcb.15033, Institutional Repository
Strepparava, N., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., Wahli, T., Segner, H., & Bailey, C. (2020). Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout (Salmo trutta). Transboundary and Emerging Diseases, 67(6), 2642-2652. doi:10.1111/tbed.13615, Institutional Repository
Stähly, S., Franca, M. J., Robinson, C. T., & Schleiss, A. J. (2020). Erosion, transport and deposition of a sediment replenishment under flood conditions. Earth Surface Processes and Landforms, 45(13), 3354-3367. doi:10.1002/esp.4970, Institutional Repository
Tabi, A., Pennekamp, F., Altermatt, F., Alther, R., Fronhofer, E. A., Horgan, K., … Saavedra, S. (2020). Species multidimensional effects explain idiosyncratic responses of communities to environmental change. Nature Ecology & Evolution, 4, 1036-1043. doi:10.1038/s41559-020-1206-6, Institutional Repository
Thomas, H. J. D., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Kattge, J., Diaz, S., … de Vries, F. T. (2020). Global plant trait relationships extend to the climatic extremes of the tundra biome. Nature Communications, 11, 1351 (12 pp.). doi:10.1038/s41467-020-15014-4, Institutional Repository
Weber, C., Sprecher, L., Åberg, U., Thomas, G., Baumgartner, S., & Haertel-Borer, S. (2020). Wirkungskontrollen mit Wirkung: Gemeinsam lernen für Revitalisierungen. Wasser, Energie, Luft, 112(1), 41-47. , Institutional Repository

2019

Altermatt, F., Alther, R., Fišer, C., & Švara, V. (2019). Amphipoda (Flohkrebse) der Schweiz. Checkliste, Bestimmung und Atlas. Fauna Helvetica: Vol. 32. Neuchâtel: info fauna. , Institutional Repository
Alther, R., Thompson, C., Lods-Crozet, B., & Robinson, C. T. (2019). Macroinvertebrate diversity and rarity in non-glacial Alpine streams. Aquatic Sciences, 81(3), 42 (14 pp.). doi:10.1007/s00027-019-0642-3, Institutional Repository
Anaya-Rojas, J. M., Best, R. J., Brunner, F. S., Eizaguirre, C., Leal, M. C., Melián, C. J., … Matthews, B. (2019). An experimental test of how parasites of predators can influence trophic cascades and ecosystem functioning. Ecology, 100(8), e02744 (12 pp.). doi:10.1002/ecy.2744, Institutional Repository
Arce, M. I., Mendoza-Lera, C., Almagro, M., Catalán, N., Romaní, A. M., Martí, E., … von Schiller, D. (2019). A conceptual framework for understanding the biogeochemistry of dry riverbeds through the lens of soil science. Earth-Science Reviews, 188, 441-453. doi:10.1016/j.earscirev.2018.12.001, Institutional Repository
Baho, D. L., Pomati, F., Leu, E., Hessen, D. O., Moe, S. J., Norberg, J., & Nizzetto, L. (2019). A single pulse of diffuse contaminants alters the size distribution of natural phytoplankton communities. Science of the Total Environment, 683, 578-588. doi:10.1016/j.scitotenv.2019.05.229, Institutional Repository
Baho, D. L., Leu, E., Pomati, F., Hessen, D. O., Norberg, J., Moe, S. J., … Nizzetto, L. (2019). Resilience of natural phytoplankton communities to pulse disturbances from micropollutant exposure and vertical mixing. Environmental Toxicology and Chemistry, 38(10), 2197-2208. doi:10.1002/etc.4536, Institutional Repository
Baiser, B., Gravel, D., Cirtwill, A. R., Dunne, J. A., Fahimipour, A. K., Gilarranz, L. J., … Yeakel, J. D. (2019). Ecogeographical rules and the macroecology of food webs. Global Ecology and Biogeography, 28(9), 1204-1218. doi:10.1111/geb.12925, Institutional Repository
Barnes, P. W., Williamson, C. E., Lucas, R. M., Robinson, S. A., Madronich, S., Paul, N. D., … Zepp, R. G. (2019). Ozone depletion, ultraviolet radiation, climate change and prospects for a sustainable future. Nature Sustainability, 2(7), 569-579. doi:10.1038/s41893-019-0314-2, Institutional Repository
Beck, S. V., Räsänen, K., Ahi, E. P., Kristjánsson, B. K., Skúlason, S., Jónsson, Z. O., & Leblanc, C. A. (2019). Gene expression in the phenotypically plastic Arctic charr (Salvelinus alpinus): a focus on growth and ossification at early stages of development. Evolution and Development, 21(1), 16-30. doi:10.1111/ede.12275, Institutional Repository
Benateau, S., Gaudard, A., Stamm, C., & Altermatt, F. (2019). Climate change and freshwater ecosystems. Impacts on water quality and ecological status. Dübendorf: Eawag. , Institutional Repository
Blackman, R. C., Mächler, E., Altermatt, F., Arnold, A., Beja, P., Boets, P., … Deiner, K. (2019). Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments. Metabarcoding and Metagenomics, 3, 49-57. doi:10.3897/mbmg.3.34735, Institutional Repository
Boulain, H., Legeai, F., Jaquiéry, J., Guy, E., Morlière, S., Simon, J. C., & Sugio, A. (2019). Differential expression of candidate salivary effector genes in pea aphid biotypes with distinct host plant specificity. Frontiers in Plant Science, 10, 1301 (12 pp.). doi:10.3389/fpls.2019.01301, Institutional Repository
Burdon, F. J., Munz, N. A., Reyes, M., Focks, A., Joss, A., Räsänen, K., … Stamm, C. (2019). Agriculture versus wastewater pollution as drivers of macroinvertebrate community structure in streams. Science of the Total Environment, 659, 1256-1265. doi:10.1016/j.scitotenv.2018.12.372, Institutional Repository
Chanut, P. C. M., Datry, T., Gabbud, C., & Robinson, C. T. (2019). Direct and indirect effects of flood regime on macroinvertebrate assemblages in a floodplain riverscape. Ecohydrology, 12(5), e2095 (16 pp.). doi:10.1002/eco.2095, Institutional Repository
Chanut, P. (2019). Ecohydrology of a macroinvertebrate metacommunity in a regulated floodplain (Doctoral dissertation). doi:10.3929/ethz-b-000349848, Institutional Repository
Colas, F., Woodward, G., Burdon, F. J., Guérold, F., Chauvet, E., Cornut, J., … Tiegs, S. D. (2019). Towards a simple global-standard bioassay for a key ecosystem process: organic-matter decomposition using cotton strips. Ecological Indicators, 106, 105466 (9 pp.). doi:10.1016/j.ecolind.2019.105466, Institutional Repository
Dakos, V., Matthews, B., Hendry, A. P., Levine, J., Loeuille, N., Norberg, J., … De Meester, L. (2019). Ecosystem tipping points in an evolving world. Nature Ecology & Evolution, 3(3), 355-362. doi:10.1038/s41559-019-0797-2, Institutional Repository
De Meester, L., Brans, K. I., Govaert, L., Souffreau, C., Mukherjee, S., Vanvelk, H., … Urban, M. C. (2019). Analysing eco-evolutionary dynamics - the challenging complexity of the real world. Functional Ecology, 33(1), 43-59. doi:10.1111/1365-2435.13261, Institutional Repository
Enache, I., Florescu, L. I., Moldoveanu, M., Moza, M. I., Parpală, L., Sandu, C., … Spaak, P. (2019). Diversity and distribution of Daphnia across space and time in Danube Delta lakes explained by food quality and abundance. Hydrobiologia, 842(1), 39-54. doi:10.1007/s10750-019-04025-y, Institutional Repository
Estévez, E., Álvarez‐Martínez, J. M., Álvarez‐Cabria, M., Robinson, C. T., Battin, T. J., & Barquín, J. (2019). Catchment land cover influences macroinvertebrate food‐web structure and energy flow pathways in mountain streams. Freshwater Biology, 64(9), 1557-1571. doi:10.1111/fwb.13327, Institutional Repository
Falniowski, A., Prevorčnik, S., Delić, T., Alther, R., Altermatt, F., & Hofman, S. (2019). Monophyly of the Moitessieriidae Bourguignat, 1863 (Caenogastropoda: Truncatelloidea). Folia Malacologica, 27(1), 61-70. doi:10.12657/folmal.027.005, Institutional Repository
Fišer, C., Delić, T., Luštrik, R., Zagmajster, M., & Altermatt, F. (2019). Niches within a niche: ecological differentiation of subterranean amphipods across Europe's interstitial waters. Ecography, 42, 1212-1223. doi:10.1111/ecog.03983, Institutional Repository
Fontana, S., Thomas, M. K., Reyes, M., & Pomati, F. (2019). Light limitation increases multidimensional trait evenness in phytoplankton populations. ISME Journal, 13, 1159-1167. doi:10.1038/s41396-018-0320-9, Institutional Repository
Gabbud, C., Robinson, C. T., & Lane, S. N. (2019). Sub-basin and temporal variability of macroinvertebrate assemblages in Alpine streams: when and where to sample?. Hydrobiologia, 830(1), 179-200. doi:10.1007/s10750-018-3862-y, Institutional Repository
Gabbud, C., Robinson, C. T., & Lane, S. N. (2019). Summer is in winter: disturbance-driven shifts in macroinvertebrate communities following hydroelectric power exploitation. Science of the Total Environment, 650, 2164-2180. doi:10.1016/j.scitotenv.2018.09.180, Institutional Repository
Gao, X., Chen, H., Govaert, L., Wang, W., & Yang, J. (2019). Responses of zooplankton body size and community trophic structure to temperature change in a subtropical reservoir. Ecology and Evolution, 9(22), 12544-12555. doi:10.1002/ece3.5718, Institutional Repository
González‐Ferreras, A. M., Bertuzzo, E., Barquín, J., Carraro, L., Alonso, C., & Rinaldo, A. (2019). Effects of altered river network connectivity on the distribution of Salmo trutta: insights from a metapopulation model. Freshwater Biology, 64(11), 1877-1895. doi:10.1111/fwb.13379, Institutional Repository
Govaert, L., Fronhofer, E. A., Lion, S., Eizaguirre, C., Bonte, D., Egas, M., … Matthews, B. (2019). Eco‐evolutionary feedbacks - theoretical models and perspectives. Functional Ecology, 33(1), 13-30. doi:10.1111/1365-2435.13241, Institutional Repository
Hafer, N., & Vorburger, C. (2019). Diversity begets diversity: do parasites promote variation in protective symbionts?. Current Opinion in Insect Science, 32, 8-14. doi:10.1016/j.cois.2018.08.008, Institutional Repository
Hafer-Hahmann, N. (2019). Experimental evolution of parasitic host manipulation. Proceedings of the Royal Society B: Biological Sciences, 286(1895), 20182413 (8 pp.). doi:10.1098/rspb.2018.2413, Institutional Repository
Hafer‐Hahmann, N. (2019). Behavior out of control: experimental evolution of resistance to host manipulation. Ecology and Evolution, 9(12), 7237-7245. doi:10.1002/ece3.5294, Institutional Repository
Harmon, L. J., Andreazzi, C. S., Débarre, F., Drury, J., Goldberg, E. E., Martins, A. B., … Matthews, B. (2019). Detecting the macroevolutionary signal of species interactions. Journal of Evolutionary Biology, 32(8), 769-782. doi:10.1111/jeb.13477, Institutional Repository
Harper, L. R., Buxton, A. S., Rees, H. C., Bruce, K., Brys, R., Halfmaerten, D., … Hänfling, B. (2019). Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds. Hydrobiologia, 826(1), 25-41. doi:10.1007/s10750-018-3750-5, Institutional Repository
Harvey, E., & Altermatt, F. (2019). Regulation of the functional structure of aquatic communities across spatial scales in a major river network. Ecology, 100(4), e02633 (9 pp.). doi:10.1002/ecy.2633, Institutional Repository
Ishikawa, A., Kabeya, N., Ikeya, K., Kakioka, R., Cech, J. N., Osada, N., … Kitano, J. (2019). A key metabolic gene for recurrent freshwater colonization and radiation in fishes. Science, 364(6443), 886-889. doi:10.1126/science.aau5656, Institutional Repository
Jamin, A. R., & Vorburger, C. (2019). Estimating costs of aphid resistance to parasitoids conferred by a protective strain of the bacterial endosymbiont Regiella insecticola. Entomologia Experimentalis et Applicata, 167(3), 252-260. doi:10.1111/eea.12749, Institutional Repository
Karvonen, A., Jokela, J., & Laine, A. L. (2019). Importance of sequence and timing in parasite coinfections. Trends in Parasitology, 35(2), 109-118. doi:10.1016/j.pt.2018.11.007, Institutional Repository
Kosman, E., & Jokela, J. (2019). Dissimilarity of individual microsatellite profiles under different mutation models: empirical approach. Ecology and Evolution, 9(7), 4038-4054. doi:10.1002/ece3.5032, Institutional Repository
Leicht, K., & Seppälä, O. (2019). Direct and transgenerational effects of an experimental heatwave on early life stages in a freshwater snail. Freshwater Biology, 64(12), 2131-2140. doi:10.1111/fwb.13401, Institutional Repository
Leicht, K., Jokela, J., & Seppälä, O. (2019). Inbreeding does not alter the response to an experimental heat wave in a freshwater snail. PLoS One, 14(8), e0220669 (12 pp.). doi:10.1371/journal.pone.0220669, Institutional Repository
Lewington‐Pearce, L., Narwani, A., Thomas, M. K., Kremer, C. T., Vogler, H., & Kratina, P. (2019). Temperature‐dependence of minimum resource requirements alters competitive hierarchies in phytoplankton. Oikos, 128(8), 1194-1205. doi:10.1111/oik.06060, Institutional Repository
Limberger, R., Birtel, J., Peter, H., Catalán, N., da Silva Farias, D., Best, R. J., … Matthews, B. (2019). Predator-induced changes in dissolved organic carbon dynamics. Oikos, 128(3), 430-440. doi:10.1111/oik.05673, Institutional Repository
Little, C. J., & Altermatt, F. (2019). Differential resource consumption in leaf litter mixtures by native and non-native amphipods. Aquatic Ecology, 53(2), 151-162. doi:10.1007/s10452-019-09679-3, Institutional Repository
Little, C. J., Fronhofer, E. A., & Altermatt, F. (2019). Dispersal syndromes can impact ecosystem functioning in spatially structured freshwater populations. Biology Letters, 15(3), 20180865 (6 pp.). doi:10.1098/rsbl.2018.0865, Institutional Repository
Little, C. J. (2019). Keystone shredders and the headwater stream meta-ecosystem (Doctoral dissertation). Universität Zürich, Zürich, 262 p. , Institutional Repository
Logar, I., Brouwer, R., & Paillex, A. (2019). Do the societal benefits of river restoration outweigh their costs? A cost-benefit analysis. Journal of Environmental Management, 232, 1075-1085. doi:10.1016/j.jenvman.2018.11.098, Institutional Repository
Lürig, M. D. (2019). Species interactions - from phenotypes to ecosystems (Doctoral dissertation). doi:10.3929/ethz-b-000382508, Institutional Repository
Lürig, M. D., Best, R. J., Svitok, M., Jokela, J., & Matthews, B. (2019). The role of plasticity in the evolution of cryptic pigmentation in a freshwater isopod. Journal of Animal Ecology, 88(4), 612-623. doi:10.1111/1365-2656.12950, Institutional Repository
Mathé‐Hubert, H., Kaech, H., Ganesanandamoorthy, P., & Vorburger, C. (2019). Evolutionary costs and benefits of infection with diverse strains of Spiroplasmain pea aphids. Evolution, International Journal of Organic Evolution, 73(7), 1466-1481. doi:10.1111/evo.13740, Institutional Repository
Mathé‐Hubert, H., Kaech, H., Hertaeg, C., Jaenike, J., & Vorburger, C. (2019). Non‐random associations of maternally transmitted symbionts in insects: the roles of drift versus biased co‐transmission and selection. Molecular Ecology, 28, 5330-5346. doi:10.1111/mec.15206, Institutional Repository
Matthey-Doret, C., van der Kooi, C. J., Jeffries, D. L., Bast, J., Dennis, A. B., Vorburger, C., & Schwander, T. (2019). Mapping of multiple complementary sex determination loci in a parasitoid wasp. Genome Biology and Evolution, 11(10), 2954-2962. doi:10.1093/gbe/evz219, Institutional Repository
Monchamp, M. E., Spaak, P., & Pomati, F. (2019). High dispersal levels and lake warming are emergent drivers of cyanobacterial community assembly in peri-Alpine lakes. Scientific Reports, 9, 7366 (8 pp.). doi:10.1038/s41598-019-43814-2, Institutional Repository
Monchamp, M. E., Spaak, P., & Pomati, F. (2019). Long term diversity and distribution of non-photosynthetic cyanobacteria in peri-Alpine lakes. Frontiers in Microbiology, 9, 3344 (11 pp.). doi:10.3389/fmicb.2018.03344, Institutional Repository
Mächler, E., Little, C. J., Wüthrich, R., Alther, R., Fronhofer, E. A., Gounand, I., … Altermatt, F. (2019). Assessing different components of diversity across a river network using eDNA. Environmental DNA, 1(3), 290-301. doi:10.1002/edn3.33, Institutional Repository
Narwani, A., Reyes, M., Pereira, A. L., Penson, H., Dennis, S. R., Derrer, S., … Matthews, B. (2019). Interactive effects of foundation species on ecosystem functioning and stability in response to disturbance. Proceedings of the Royal Society B: Biological Sciences, 286(1913), 20191857 (10 pp.). doi:10.1098/rspb.2019.1857, Institutional Repository
Navarro, J. I., Kowarik, C., Wessels, M., Straile, D., & Martin‐Creuzburg, D. (2019). Resilience to changes in lake trophic state: nutrient allocation into Daphnia resting eggs. Ecology and Evolution, 9, 12813-12825. doi:10.1002/ece3.5759, Institutional Repository
Näpflin, K., O’Connor, E. A., Becks, L., Bensch, S., Ellis, V. A., Hafer-Hahmann, N., … Edwards, S. V. (2019). Genomics of host-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales. PeerJ, 7, e8013 (37 pp.). doi:10.7717/peerj.8013, Institutional Repository
O'Connor, M. I., Pennell, M. W., Altermatt, F., Matthews, B., Melián, C. J., & Gonzalez, A. (2019). Principles of ecology revisited: integrating information and ecological theories for a more unified science. Frontiers in Ecology and Evolution, 7, 219 (20 pp.). doi:10.3389/fevo.2019.00219, Institutional Repository
Okamura, B., Hartikainen, H., & Trew, J. (2019). Waterbird-mediated dispersal and freshwater biodiversity: general insights from bryozoans. Frontiers in Ecology and Evolution, 7, 29 (9 pp.). doi:10.3389/fevo.2019.00029, Institutional Repository
Paczesniak, D., Klappert, K., Kopp, K., Neiman, M., Seppälä, K., Lively, C. M., & Jokela, J. (2019). Parasite resistance predicts fitness better than fecundity in a natural population of the freshwater snail Potamopyrgus antipodarum. Evolution, International Journal of Organic Evolution, 73(8), 1634-1646. doi:10.1111/evo.13768, Institutional Repository
Pennekamp, F., Iles, A. C., Garland, J., Brennan, G., Brose, U., Gaedke, U., … Petchey, O. L. (2019). The intrinsic predictability of ecological time series and its potential to guide forecasting. Ecological Monographs, 89(2), e01359 (17 pp.). doi:10.1002/ecm.1359, Institutional Repository